RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 SYNE1Q8NF91 8797 aaKnown RBP3.94□□□□□ -1.78
DNMT3A-203ENST00000380746 KRTAP9-6A0A140TA67 174 aa3.9□□□□□ -1.78
DNMT3A-203ENST00000380746 KRTAP9-2Q9BYQ4 174 aa3.9□□□□□ -1.78
DNMT3A-203ENST00000380746 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
DNMT3A-203ENST00000380746 KRTAP4-3Q9BYR4 195 aa3.83□□□□□ -1.8
DNMT3A-203ENST00000380746 KRTAP19-7Q3SYF9 63 aa3.82□□□□□ -1.8
DNMT3A-203ENST00000380746 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
DNMT3A-203ENST00000380746 MT1GP13640 62 aa3.76□□□□□ -1.81
DNMT3A-203ENST00000380746 SPRR2FQ96RM1 72 aa3.76□□□□□ -1.81
DNMT3A-203ENST00000380746 SYNE2Q8WXH0 6885 aaKnown RBP3.75□□□□□ -1.81
DNMT3A-203ENST00000380746 MT1LQ93083 61 aa3.74□□□□□ -1.81
DNMT3A-203ENST00000380746 MT1EP04732 61 aa3.74□□□□□ -1.81
DNMT3A-203ENST00000380746 MACF1Q9UPN3 7388 aaKnown RBP3.69□□□□□ -1.82
DNMT3A-203ENST00000380746 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
DNMT3A-203ENST00000380746 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
DNMT3A-203ENST00000380746 LCE1DQ5T752 114 aa3.64□□□□□ -1.83
DNMT3A-203ENST00000380746 KRTAP4-12Q9BQ66 201 aa3.63□□□□□ -1.83
DNMT3A-203ENST00000380746 KRTAP19-6Q3LI70 58 aa3.62□□□□□ -1.83
DNMT3A-203ENST00000380746 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
DNMT3A-203ENST00000380746 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
DNMT3A-203ENST00000380746 MT1MQ8N339 61 aa3.54□□□□□ -1.84
DNMT3A-203ENST00000380746 KRTAP4-9Q9BYQ8 210 aa3.5□□□□□ -1.85
DNMT3A-203ENST00000380746 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
DNMT3A-203ENST00000380746 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
DNMT3A-203ENST00000380746 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
DNMT3A-203ENST00000380746 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
DNMT3A-203ENST00000380746 KRTAP12-4P60329 112 aa3.41□□□□□ -1.86
DNMT3A-203ENST00000380746 SPRR2EP22531 72 aa3.39□□□□□ -1.87
DNMT3A-203ENST00000380746 SPRR2BP35325 72 aa3.39□□□□□ -1.87
DNMT3A-203ENST00000380746 SPRR2AP35326 72 aa3.39□□□□□ -1.87
DNMT3A-203ENST00000380746 KRTAP5-3Q6L8H2 238 aa3.37□□□□□ -1.87
DNMT3A-203ENST00000380746 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
DNMT3A-203ENST00000380746 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
DNMT3A-203ENST00000380746 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
DNMT3A-203ENST00000380746 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
DNMT3A-203ENST00000380746 KRTAP2-2Q9BYT5 123 aa3.3□□□□□ -1.88
DNMT3A-203ENST00000380746 KRTAP19-4Q3LI73 84 aa3.3□□□□□ -1.88
DNMT3A-203ENST00000380746 KRTAP6-1Q3LI64 71 aa3.27□□□□□ -1.89
DNMT3A-203ENST00000380746 LCE4AQ5TA78 99 aa3.24□□□□□ -1.89
DNMT3A-203ENST00000380746 SPRR2DP22532 72 aa3.22□□□□□ -1.89
DNMT3A-203ENST00000380746 KRTAP6-3Q3LI67 103 aa3.22□□□□□ -1.89
DNMT3A-203ENST00000380746 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
DNMT3A-203ENST00000380746 KRTAP9-7A8MTY7 169 aa3.13□□□□□ -1.91
DNMT3A-203ENST00000380746 MT1AP04731 61 aa3.1□□□□□ -1.91
DNMT3A-203ENST00000380746 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
DNMT3A-203ENST00000380746 PRM1P04553 51 aa3.05□□□□□ -1.92
DNMT3A-203ENST00000380746 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
DNMT3A-203ENST00000380746 MT4P47944 62 aa3.03□□□□□ -1.92
DNMT3A-203ENST00000380746 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
DNMT3A-203ENST00000380746 KRTAP5-9P26371 169 aa2.98□□□□□ -1.93
DNMT3A-203ENST00000380746 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
DNMT3A-203ENST00000380746 MT3P25713 68 aa2.9□□□□□ -1.95
DNMT3A-203ENST00000380746 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
DNMT3A-203ENST00000380746 NEBP20929 6669 aa2.81□□□□□ -1.96
DNMT3A-203ENST00000380746 KRTAP20-1Q3LI63 56 aa2.71□□□□□ -1.98
DNMT3A-203ENST00000380746 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
DNMT3A-203ENST00000380746 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
DNMT3A-203ENST00000380746 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
DNMT3A-203ENST00000380746 MUC5ACP98088 5654 aa2.56□□□□□ -2
DNMT3A-203ENST00000380746 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
DNMT3A-203ENST00000380746 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.02
DNMT3A-203ENST00000380746 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
DNMT3A-203ENST00000380746 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
DNMT3A-203ENST00000380746 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
DNMT3A-203ENST00000380746 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
DNMT3A-203ENST00000380746 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
DNMT3A-203ENST00000380746 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
DNMT3A-203ENST00000380746 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
DNMT3A-203ENST00000380746 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
DNMT3A-203ENST00000380746 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
DNMT3A-203ENST00000380746 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
DNMT3A-203ENST00000380746 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
DNMT3A-203ENST00000380746 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
DNMT3A-203ENST00000380746 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
DNMT3A-203ENST00000380746 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
DNMT3A-203ENST00000380746 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
DNMT3A-203ENST00000380746 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 65.6 ms