RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 MUC12Q9UKN1 5478 aa7.15□□□□□ -1.27
SMN2-202ENST00000380742 KRTAP25-1Q3LHN0 102 aa7.12□□□□□ -1.27
SMN2-202ENST00000380742 ROMO1P60602 79 aa7.09□□□□□ -1.27
SMN2-202ENST00000380742 LCE3AQ5TA76 89 aa7.09□□□□□ -1.27
SMN2-202ENST00000380742 KRTAP23-1A1A580 65 aa7.04□□□□□ -1.28
SMN2-202ENST00000380742 KRTAP19-7Q3SYF9 63 aa7.04□□□□□ -1.28
SMN2-202ENST00000380742 MDN1Q9NU22 5596 aa7.03□□□□□ -1.28
SMN2-202ENST00000380742 KRTAP19-5Q3LI72 72 aa6.99□□□□□ -1.29
SMN2-202ENST00000380742 LCE4AQ5TA78 99 aa6.99□□□□□ -1.29
SMN2-202ENST00000380742 NEBP20929 6669 aa6.97□□□□□ -1.29
SMN2-202ENST00000380742 MT1EP04732 61 aa6.94□□□□□ -1.3
SMN2-202ENST00000380742 LCE5AQ5TCM9 118 aa6.94□□□□□ -1.3
SMN2-202ENST00000380742 SPRR2EP22531 72 aa6.93□□□□□ -1.3
SMN2-202ENST00000380742 SPRR2BP35325 72 aa6.93□□□□□ -1.3
SMN2-202ENST00000380742 SPRR2AP35326 72 aa6.93□□□□□ -1.3
SMN2-202ENST00000380742 LCE1AQ5T7P2 110 aa6.92□□□□□ -1.3
SMN2-202ENST00000380742 KRTAP12-3P60328 96 aa6.82□□□□□ -1.32
SMN2-202ENST00000380742 PRAC1Q96KF2 57 aa6.82□□□□□ -1.32
SMN2-202ENST00000380742 KRTAP19-3Q7Z4W3 81 aa6.76□□□□□ -1.33
SMN2-202ENST00000380742 PP632Q6XCG6 107 aa6.73□□□□□ -1.33
SMN2-202ENST00000380742 A0A0A0MQY5 61 aa6.72□□□□□ -1.33
SMN2-202ENST00000380742 MT1LQ93083 61 aa6.71□□□□□ -1.33
SMN2-202ENST00000380742 SPRR2DP22532 72 aa6.69□□□□□ -1.34
SMN2-202ENST00000380742 KRTAP19-4Q3LI73 84 aa6.68□□□□□ -1.34
SMN2-202ENST00000380742 MT1GP13640 62 aa6.66□□□□□ -1.34
SMN2-202ENST00000380742 MT1MQ8N339 61 aa6.57□□□□□ -1.36
SMN2-202ENST00000380742 KRTAP20-1Q3LI63 56 aa6.56□□□□□ -1.36
SMN2-202ENST00000380742 KRTAP15-1Q3LI76 137 aa6.55□□□□□ -1.36
SMN2-202ENST00000380742 KRTAP2-3P0C7H8 128 aa6.53□□□□□ -1.36
SMN2-202ENST00000380742 KRTAP2-4Q9BYR9 128 aa6.53□□□□□ -1.36
SMN2-202ENST00000380742 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
SMN2-202ENST00000380742 DSTQ03001 7570 aaKnown RBP6.39□□□□□ -1.39
SMN2-202ENST00000380742 KRTAP2-2Q9BYT5 123 aa6.36□□□□□ -1.39
SMN2-202ENST00000380742 KRTAP2-1Q9BYU5 128 aa6.36□□□□□ -1.39
SMN2-202ENST00000380742 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
SMN2-202ENST00000380742 NDUFAF8A1L188 74 aa6.06□□□□□ -1.44
SMN2-202ENST00000380742 KRTAP9-6A8MVA2 160 aa6□□□□□ -1.45
SMN2-202ENST00000380742 KRTAP5-5Q701N2 237 aaPredicted RBP5.98□□□□□ -1.45
SMN2-202ENST00000380742 KRTAP5-4Q6L8H1 288 aa5.95□□□□□ -1.46
SMN2-202ENST00000380742 LUZP6Q538Z0 58 aa5.94□□□□□ -1.46
SMN2-202ENST00000380742 MT4P47944 62 aa5.82□□□□□ -1.48
SMN2-202ENST00000380742 SPRR5A0A1B0GTR4 108 aa5.8□□□□□ -1.48
SMN2-202ENST00000380742 HMCN1Q96RW7 5635 aa5.72□□□□□ -1.49
SMN2-202ENST00000380742 MT1AP04731 61 aa5.71□□□□□ -1.5
SMN2-202ENST00000380742 SYNE1Q8NF91 8797 aaKnown RBP5.7□□□□□ -1.5
SMN2-202ENST00000380742 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.69□□□□□ -1.5
SMN2-202ENST00000380742 KRTAP6-1Q3LI64 71 aa5.67□□□□□ -1.5
SMN2-202ENST00000380742 KRTAP12-4P60329 112 aa5.65□□□□□ -1.51
SMN2-202ENST00000380742 KRTAP20-2Q3LI61 65 aa5.57□□□□□ -1.52
SMN2-202ENST00000380742 AHNAK2Q8IVF2 5795 aa5.33□□□□□ -1.56
SMN2-202ENST00000380742 KRTAP5-2Q701N4 177 aa5.31□□□□□ -1.56
SMN2-202ENST00000380742 INE1O15225 51 aa5.3□□□□□ -1.56
SMN2-202ENST00000380742 KRTAP6-2Q3LI66 62 aa5.3□□□□□ -1.56
SMN2-202ENST00000380742 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
SMN2-202ENST00000380742 MT3P25713 68 aa5.19□□□□□ -1.58
SMN2-202ENST00000380742 KRTAP5-11Q6L8G4 156 aa5.16□□□□□ -1.58
SMN2-202ENST00000380742 KRTAP5-10Q6L8G5 202 aa5.13□□□□□ -1.59
SMN2-202ENST00000380742 OBSCNQ5VST9 7968 aa4.91□□□□□ -1.62
SMN2-202ENST00000380742 KRTAP5-1Q6L8H4 278 aa4.84□□□□□ -1.63
SMN2-202ENST00000380742 KRTAP5-7Q6L8G8 165 aa4.83□□□□□ -1.64
SMN2-202ENST00000380742 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
SMN2-202ENST00000380742 KRTAP4-4Q9BYR3 166 aa4.74□□□□□ -1.65
SMN2-202ENST00000380742 LCE3DQ9BYE3 92 aa4.66□□□□□ -1.66
SMN2-202ENST00000380742 LCE1EQ5T753 118 aa4.64□□□□□ -1.67
SMN2-202ENST00000380742 MUC5ACP98088 5654 aa4.52□□□□□ -1.69
SMN2-202ENST00000380742 LCE1FQ5T754 118 aa4.5□□□□□ -1.69
SMN2-202ENST00000380742 LCE3EQ5T5B0 92 aa4.48□□□□□ -1.69
SMN2-202ENST00000380742 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.71
SMN2-202ENST00000380742 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
SMN2-202ENST00000380742 MUC5BQ9HC84 5762 aaPredicted RBP4.27□□□□□ -1.73
SMN2-202ENST00000380742 AHNAKQ09666 5890 aaKnown RBP4.19□□□□□ -1.74
SMN2-202ENST00000380742 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
SMN2-202ENST00000380742 PRM1P04553 51 aa3.68□□□□□ -1.82
SMN2-202ENST00000380742 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
SMN2-202ENST00000380742 MUC19Q7Z5P9 8384 aa3□□□□□ -1.93
SMN2-202ENST00000380742 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
SMN2-202ENST00000380742 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 79 ms