RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 KRTAP4-3Q9BYR4 195 aa8.11□□□□□ -1.11
U2AF1-202ENST00000380276 A0A1B0GU33 70 aa8.09□□□□□ -1.11
U2AF1-202ENST00000380276 KRTAP12-1P59990 96 aa8.09□□□□□ -1.11
U2AF1-202ENST00000380276 KRTAP5-10Q6L8G5 202 aa8.06□□□□□ -1.12
U2AF1-202ENST00000380276 KRTAP5-4Q6L8H1 288 aa8.06□□□□□ -1.12
U2AF1-202ENST00000380276 C10orf95Q9H7T3 257 aa8.01□□□□□ -1.13
U2AF1-202ENST00000380276 K7ERU9 68 aa7.99□□□□□ -1.13
U2AF1-202ENST00000380276 LCE3AQ5TA76 89 aa7.99□□□□□ -1.13
U2AF1-202ENST00000380276 SERP2Q8N6R1 65 aa7.99□□□□□ -1.13
U2AF1-202ENST00000380276 A0A0A0MQY5 61 aa7.95□□□□□ -1.14
U2AF1-202ENST00000380276 TNP1P09430 55 aa7.89□□□□□ -1.15
U2AF1-202ENST00000380276 SMIM26A0A096LP01 95 aa7.88□□□□□ -1.15
U2AF1-202ENST00000380276 A8MU10 97 aa7.83□□□□□ -1.16
U2AF1-202ENST00000380276 KRTAP5-7Q6L8G8 165 aa7.81□□□□□ -1.16
U2AF1-202ENST00000380276 KRTAP5-3Q6L8H2 238 aa7.81□□□□□ -1.16
U2AF1-202ENST00000380276 A0A1B0GU69 56 aa7.78□□□□□ -1.16
U2AF1-202ENST00000380276 KRTAP20-2Q3LI61 65 aa7.69□□□□□ -1.18
U2AF1-202ENST00000380276 KRTAP12-3P60328 96 aa7.66□□□□□ -1.18
U2AF1-202ENST00000380276 COX7CP15954 63 aa7.61□□□□□ -1.19
U2AF1-202ENST00000380276 SPRR5A0A1B0GTR4 108 aa7.6□□□□□ -1.19
U2AF1-202ENST00000380276 H7BZZ5 65 aa7.58□□□□□ -1.2
U2AF1-202ENST00000380276 KRTAP12-4P60329 112 aa7.55□□□□□ -1.2
U2AF1-202ENST00000380276 KRTAP5-5Q701N2 237 aaPredicted RBP7.55□□□□□ -1.2
U2AF1-202ENST00000380276 PRR15LQ9BU68 103 aa7.4□□□□□ -1.22
U2AF1-202ENST00000380276 SYNE1Q8NF91 8797 aaKnown RBP7.33□□□□□ -1.24
U2AF1-202ENST00000380276 KRTAP25-1Q3LHN0 102 aa7.17□□□□□ -1.26
U2AF1-202ENST00000380276 LINC01558Q9Y6Z2 57 aa7.15□□□□□ -1.26
U2AF1-202ENST00000380276 UQCR11O14957 56 aa7.12□□□□□ -1.27
U2AF1-202ENST00000380276 ANAPC13Q9BS18 74 aa7.12□□□□□ -1.27
U2AF1-202ENST00000380276 ATP5EP56381 51 aaPredicted RBP7.03□□□□□ -1.28
U2AF1-202ENST00000380276 LCE3CQ5T5A8 94 aa6.99□□□□□ -1.29
U2AF1-202ENST00000380276 CCDC179H3BU77 68 aa6.98□□□□□ -1.29
U2AF1-202ENST00000380276 KRTAP5-2Q701N4 177 aa6.98□□□□□ -1.29
U2AF1-202ENST00000380276 MT1AP04731 61 aa6.94□□□□□ -1.3
U2AF1-202ENST00000380276 KRTAP6-1Q3LI64 71 aa6.94□□□□□ -1.3
U2AF1-202ENST00000380276 K7ERS5 55 aa6.93□□□□□ -1.3
U2AF1-202ENST00000380276 MIR22HGQ0VDD5 57 aa6.93□□□□□ -1.3
U2AF1-202ENST00000380276 KRTAP5-8O75690 187 aa6.88□□□□□ -1.31
U2AF1-202ENST00000380276 AHNAKQ09666 5890 aaKnown RBP6.85□□□□□ -1.31
U2AF1-202ENST00000380276 MUC5ACP98088 5654 aa6.81□□□□□ -1.32
U2AF1-202ENST00000380276 MUC5BQ9HC84 5762 aaPredicted RBP6.78□□□□□ -1.32
U2AF1-202ENST00000380276 KRTAP6-2Q3LI66 62 aa6.73□□□□□ -1.33
U2AF1-202ENST00000380276 OBSCNQ5VST9 7968 aa6.68□□□□□ -1.34
U2AF1-202ENST00000380276 MT3P25713 68 aa6.67□□□□□ -1.34
U2AF1-202ENST00000380276 TMEM258P61165 79 aa6.66□□□□□ -1.34
U2AF1-202ENST00000380276 KRTAP9-6A8MVA2 160 aa6.57□□□□□ -1.36
U2AF1-202ENST00000380276 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
U2AF1-202ENST00000380276 PSPHP1O15172 72 aa6.56□□□□□ -1.36
U2AF1-202ENST00000380276 RPS28P62857 69 aaKnown RBP6.5□□□□□ -1.37
U2AF1-202ENST00000380276 CDC42SE1Q9NRR8 79 aa6.47□□□□□ -1.37
U2AF1-202ENST00000380276 V9GYY9 64 aa6.43□□□□□ -1.38
U2AF1-202ENST00000380276 Q1T7F1 81 aa6.41□□□□□ -1.38
U2AF1-202ENST00000380276 KRTAP5-1Q6L8H4 278 aa6.35□□□□□ -1.39
U2AF1-202ENST00000380276 ROMO1P60602 79 aa6.32□□□□□ -1.4
U2AF1-202ENST00000380276 A6NED7 52 aa6.31□□□□□ -1.4
U2AF1-202ENST00000380276 NDUFAF8A1L188 74 aa6.25□□□□□ -1.41
U2AF1-202ENST00000380276 LCE1FQ5T754 118 aa6.2□□□□□ -1.42
U2AF1-202ENST00000380276 LCE1EQ5T753 118 aa5.96□□□□□ -1.46
U2AF1-202ENST00000380276 KRTAP5-11Q6L8G4 156 aa5.88□□□□□ -1.47
U2AF1-202ENST00000380276 PRO0628Q9UI54 55 aa5.8□□□□□ -1.48
U2AF1-202ENST00000380276 BRK1Q8WUW1 75 aa5.77□□□□□ -1.49
U2AF1-202ENST00000380276 LCE1BQ5T7P3 118 aa5.74□□□□□ -1.49
U2AF1-202ENST00000380276 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.53□□□□□ -1.52
U2AF1-202ENST00000380276 PMAIP1Q13794 54 aa5.49□□□□□ -1.53
U2AF1-202ENST00000380276 LCE1CQ5T751 118 aa5.49□□□□□ -1.53
U2AF1-202ENST00000380276 KTN1-AS1Q86SY8 53 aa5.34□□□□□ -1.55
U2AF1-202ENST00000380276 LCE3EQ5T5B0 92 aa5.32□□□□□ -1.56
U2AF1-202ENST00000380276 LCE3DQ9BYE3 92 aa4.96□□□□□ -1.62
U2AF1-202ENST00000380276 PHGR1C9JFL3 82 aa4.79□□□□□ -1.64
U2AF1-202ENST00000380276 KRTAP4-4Q9BYR3 166 aa4.64□□□□□ -1.67
U2AF1-202ENST00000380276 KRTAP21-2Q3LI59 83 aa4.53□□□□□ -1.68
U2AF1-202ENST00000380276 LUZP6Q538Z0 58 aa4.3□□□□□ -1.72
U2AF1-202ENST00000380276 MUC19Q7Z5P9 8384 aa4.11□□□□□ -1.75
U2AF1-202ENST00000380276 KRTAP21-1Q3LI58 79 aa3.61□□□□□ -1.83
U2AF1-202ENST00000380276 INE1O15225 51 aa3.55□□□□□ -1.84
U2AF1-202ENST00000380276 PRM1P04553 51 aa3.22□□□□□ -1.89
U2AF1-202ENST00000380276 MUC16Q8WXI7 14507 aa2.92□□□□□ -1.94
Retrieved 77 of 20,778 RNA–protein pairs in 53.6 ms