RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
RFC3-201ENST00000380071 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
RFC3-201ENST00000380071 INE1O15225 51 aa4.38□□□□□ -1.71
RFC3-201ENST00000380071 KRTAP4-11Q9BYQ6 195 aa4.38□□□□□ -1.71
RFC3-201ENST00000380071 KRTAP19-7Q3SYF9 63 aa4.35□□□□□ -1.71
RFC3-201ENST00000380071 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
RFC3-201ENST00000380071 SSPOA2VEC9 5147 aa4.31□□□□□ -1.72
RFC3-201ENST00000380071 FSIP2Q5CZC0 6907 aa4.26□□□□□ -1.73
RFC3-201ENST00000380071 MT1EP04732 61 aa4.22□□□□□ -1.73
RFC3-201ENST00000380071 MT1LQ93083 61 aa4.21□□□□□ -1.74
RFC3-201ENST00000380071 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
RFC3-201ENST00000380071 KRTAP2-3P0C7H8 128 aa4.12□□□□□ -1.75
RFC3-201ENST00000380071 KRTAP2-4Q9BYR9 128 aa4.12□□□□□ -1.75
RFC3-201ENST00000380071 KRTAP2-1Q9BYU5 128 aa4.12□□□□□ -1.75
RFC3-201ENST00000380071 KRTAP19-4Q3LI73 84 aa4.11□□□□□ -1.75
RFC3-201ENST00000380071 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.75
RFC3-201ENST00000380071 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
RFC3-201ENST00000380071 KRTAP4-3Q9BYR4 195 aa4.04□□□□□ -1.76
RFC3-201ENST00000380071 MT1GP13640 62 aa3.96□□□□□ -1.77
RFC3-201ENST00000380071 LCE5AQ5TCM9 118 aa3.95□□□□□ -1.78
RFC3-201ENST00000380071 KRTAP19-3Q7Z4W3 81 aa3.94□□□□□ -1.78
RFC3-201ENST00000380071 MT1MQ8N339 61 aa3.94□□□□□ -1.78
RFC3-201ENST00000380071 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
RFC3-201ENST00000380071 CRCT1Q9UGL9 99 aa3.89□□□□□ -1.79
RFC3-201ENST00000380071 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
RFC3-201ENST00000380071 MACF1Q9UPN3 7388 aaKnown RBP3.83□□□□□ -1.8
RFC3-201ENST00000380071 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
RFC3-201ENST00000380071 SYNE2Q8WXH0 6885 aaKnown RBP3.74□□□□□ -1.81
RFC3-201ENST00000380071 KRTAP9-7A8MTY7 169 aa3.72□□□□□ -1.81
RFC3-201ENST00000380071 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
RFC3-201ENST00000380071 KRTAP12-4P60329 112 aa3.66□□□□□ -1.82
RFC3-201ENST00000380071 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
RFC3-201ENST00000380071 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
RFC3-201ENST00000380071 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
RFC3-201ENST00000380071 MT1AP04731 61 aa3.52□□□□□ -1.85
RFC3-201ENST00000380071 KRTAP5-9P26371 169 aa3.52□□□□□ -1.85
RFC3-201ENST00000380071 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
RFC3-201ENST00000380071 SPRR2EP22531 72 aa3.46□□□□□ -1.85
RFC3-201ENST00000380071 SPRR2BP35325 72 aa3.46□□□□□ -1.85
RFC3-201ENST00000380071 SPRR2AP35326 72 aa3.46□□□□□ -1.85
RFC3-201ENST00000380071 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
RFC3-201ENST00000380071 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
RFC3-201ENST00000380071 SPRR2DP22532 72 aa3.31□□□□□ -1.88
RFC3-201ENST00000380071 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
RFC3-201ENST00000380071 PRM1P04553 51 aa3.26□□□□□ -1.89
RFC3-201ENST00000380071 OBSCNQ5VST9 7968 aa3.25□□□□□ -1.89
RFC3-201ENST00000380071 KRTAP6-2Q3LI66 62 aa3.22□□□□□ -1.89
RFC3-201ENST00000380071 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.9
RFC3-201ENST00000380071 MT3P25713 68 aa3.16□□□□□ -1.9
RFC3-201ENST00000380071 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
RFC3-201ENST00000380071 NEBP20929 6669 aa3.05□□□□□ -1.92
RFC3-201ENST00000380071 KRTAP20-1Q3LI63 56 aa3.01□□□□□ -1.93
RFC3-201ENST00000380071 MT4P47944 62 aa2.95□□□□□ -1.94
RFC3-201ENST00000380071 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
RFC3-201ENST00000380071 KRTAP20-2Q3LI61 65 aa2.88□□□□□ -1.95
RFC3-201ENST00000380071 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
RFC3-201ENST00000380071 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
RFC3-201ENST00000380071 GPR98Q8WXG9 6306 aa2.83□□□□□ -1.96
RFC3-201ENST00000380071 HMCN1Q96RW7 5635 aa2.83□□□□□ -1.96
RFC3-201ENST00000380071 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.97
RFC3-201ENST00000380071 KRTAP4-4Q9BYR3 166 aa2.72□□□□□ -1.97
RFC3-201ENST00000380071 MUC5ACP98088 5654 aa2.72□□□□□ -1.97
RFC3-201ENST00000380071 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
RFC3-201ENST00000380071 LCE1EQ5T753 118 aa2.57□□□□□ -2
RFC3-201ENST00000380071 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
RFC3-201ENST00000380071 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
RFC3-201ENST00000380071 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
RFC3-201ENST00000380071 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
RFC3-201ENST00000380071 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
RFC3-201ENST00000380071 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
RFC3-201ENST00000380071 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
RFC3-201ENST00000380071 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
RFC3-201ENST00000380071 LCE1FQ5T754 118 aa2.13□□□□□ -2.07
RFC3-201ENST00000380071 KRTAP21-1Q3LI58 79 aa2.05□□□□□ -2.08
RFC3-201ENST00000380071 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
RFC3-201ENST00000380071 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
RFC3-201ENST00000380071 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 79.4 ms