RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 MT1GP13640 62 aa7.13□□□□□ -1.27
CNTFR-202ENST00000378980 MT1MQ8N339 61 aa7.12□□□□□ -1.27
CNTFR-202ENST00000378980 INE1O15225 51 aa7.1□□□□□ -1.27
CNTFR-202ENST00000378980 KRTAP4-3Q9BYR4 195 aa7.08□□□□□ -1.28
CNTFR-202ENST00000378980 KRTAP2-3P0C7H8 128 aa7.08□□□□□ -1.28
CNTFR-202ENST00000378980 KRTAP2-4Q9BYR9 128 aa7.08□□□□□ -1.28
CNTFR-202ENST00000378980 KRTAP2-1Q9BYU5 128 aa7.08□□□□□ -1.28
CNTFR-202ENST00000378980 SPRR2FQ96RM1 72 aa7.04□□□□□ -1.28
CNTFR-202ENST00000378980 KRTAP9-2Q9BYQ4 174 aa7.02□□□□□ -1.29
CNTFR-202ENST00000378980 LCE5AQ5TCM9 118 aa6.98□□□□□ -1.29
CNTFR-202ENST00000378980 LOC100996750A0A140TA64 210 aa6.97□□□□□ -1.29
CNTFR-202ENST00000378980 MACF1Q9UPN3 7388 aaKnown RBP6.96□□□□□ -1.3
CNTFR-202ENST00000378980 CRCT1Q9UGL9 99 aa6.86□□□□□ -1.31
CNTFR-202ENST00000378980 KRTAP5-9P26371 169 aa6.74□□□□□ -1.33
CNTFR-202ENST00000378980 SYNE2Q8WXH0 6885 aaKnown RBP6.72□□□□□ -1.33
CNTFR-202ENST00000378980 LCE1AQ5T7P2 110 aa6.65□□□□□ -1.34
CNTFR-202ENST00000378980 MDN1Q9NU22 5596 aa6.65□□□□□ -1.34
CNTFR-202ENST00000378980 DSTQ03001 7570 aaKnown RBP6.63□□□□□ -1.35
CNTFR-202ENST00000378980 SPRR2EP22531 72 aa6.52□□□□□ -1.37
CNTFR-202ENST00000378980 SPRR2BP35325 72 aa6.52□□□□□ -1.37
CNTFR-202ENST00000378980 SPRR2AP35326 72 aa6.52□□□□□ -1.37
CNTFR-202ENST00000378980 KRTAP6-1Q3LI64 71 aa6.37□□□□□ -1.39
CNTFR-202ENST00000378980 MT1AP04731 61 aa6.36□□□□□ -1.39
CNTFR-202ENST00000378980 KRTAP5-5Q701N2 237 aaPredicted RBP6.36□□□□□ -1.39
CNTFR-202ENST00000378980 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
CNTFR-202ENST00000378980 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.33□□□□□ -1.4
CNTFR-202ENST00000378980 KRTAP6-3Q3LI67 103 aa6.32□□□□□ -1.4
CNTFR-202ENST00000378980 SPRR2DP22532 72 aa6.26□□□□□ -1.41
CNTFR-202ENST00000378980 KRTAP9-6A0A140TA67 174 aa6.19□□□□□ -1.42
CNTFR-202ENST00000378980 KRTAP12-4P60329 112 aa6.13□□□□□ -1.43
CNTFR-202ENST00000378980 KRTAP4-9Q9BYQ8 210 aa6.12□□□□□ -1.43
CNTFR-202ENST00000378980 SYNE1Q8NF91 8797 aaKnown RBP6.04□□□□□ -1.44
CNTFR-202ENST00000378980 KRTAP9-4Q9BYQ2 154 aa6□□□□□ -1.45
CNTFR-202ENST00000378980 LCE3DQ9BYE3 92 aa5.92□□□□□ -1.46
CNTFR-202ENST00000378980 NEBP20929 6669 aa5.83□□□□□ -1.48
CNTFR-202ENST00000378980 LCE3EQ5T5B0 92 aa5.81□□□□□ -1.48
CNTFR-202ENST00000378980 KRTAP9-7A8MTY7 169 aa5.77□□□□□ -1.49
CNTFR-202ENST00000378980 KRTAP5-4Q6L8H1 288 aa5.77□□□□□ -1.49
CNTFR-202ENST00000378980 KRTAP6-2Q3LI66 62 aa5.76□□□□□ -1.49
CNTFR-202ENST00000378980 MT3P25713 68 aa5.72□□□□□ -1.49
CNTFR-202ENST00000378980 LCE4AQ5TA78 99 aa5.49□□□□□ -1.53
CNTFR-202ENST00000378980 KRTAP4-6Q9BYQ5 205 aa5.49□□□□□ -1.53
CNTFR-202ENST00000378980 MT4P47944 62 aa5.46□□□□□ -1.54
CNTFR-202ENST00000378980 KRTAP20-2Q3LI61 65 aa5.39□□□□□ -1.55
CNTFR-202ENST00000378980 PRM1P04553 51 aa5.38□□□□□ -1.55
CNTFR-202ENST00000378980 KRTAP5-2Q701N4 177 aa5.34□□□□□ -1.55
CNTFR-202ENST00000378980 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
CNTFR-202ENST00000378980 HMCN1Q96RW7 5635 aa5.27□□□□□ -1.57
CNTFR-202ENST00000378980 OBSCNQ5VST9 7968 aa5.27□□□□□ -1.57
CNTFR-202ENST00000378980 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
CNTFR-202ENST00000378980 KRTAP20-1Q3LI63 56 aa5.21□□□□□ -1.58
CNTFR-202ENST00000378980 KRTAP5-3Q6L8H2 238 aa5.17□□□□□ -1.58
CNTFR-202ENST00000378980 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
CNTFR-202ENST00000378980 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
CNTFR-202ENST00000378980 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
CNTFR-202ENST00000378980 KRTAP5-10Q6L8G5 202 aa4.57□□□□□ -1.68
CNTFR-202ENST00000378980 KRTAP5-1Q6L8H4 278 aa4.55□□□□□ -1.68
CNTFR-202ENST00000378980 KRTAP4-11Q9BYQ6 195 aa4.53□□□□□ -1.68
CNTFR-202ENST00000378980 KRTAP4-2Q9BYR5 136 aa4.52□□□□□ -1.69
CNTFR-202ENST00000378980 LCE1CQ5T751 118 aa4.51□□□□□ -1.69
CNTFR-202ENST00000378980 AHNAK2Q8IVF2 5795 aa4.36□□□□□ -1.71
CNTFR-202ENST00000378980 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
CNTFR-202ENST00000378980 KRTAP5-7Q6L8G8 165 aa4.3□□□□□ -1.72
CNTFR-202ENST00000378980 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.26□□□□□ -1.73
CNTFR-202ENST00000378980 KRTAP21-2Q3LI59 83 aa4.14□□□□□ -1.75
CNTFR-202ENST00000378980 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
CNTFR-202ENST00000378980 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
CNTFR-202ENST00000378980 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
CNTFR-202ENST00000378980 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
CNTFR-202ENST00000378980 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
CNTFR-202ENST00000378980 KRTAP4-12Q9BQ66 201 aa3.65□□□□□ -1.83
CNTFR-202ENST00000378980 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
CNTFR-202ENST00000378980 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
CNTFR-202ENST00000378980 LCE1FQ5T754 118 aa3.34□□□□□ -1.88
CNTFR-202ENST00000378980 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
CNTFR-202ENST00000378980 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
CNTFR-202ENST00000378980 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 54.8 ms