RNA–Protein interactions for RNA: ENST00000378887.3

SDHAF1-201, Transcript of succinate dehydrogenase complex assembly factor 1, humanhuman

APPRIS P1 BASIC

Gene SDHAF1, Length 1,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF1-201ENST00000378887 MT1MQ8N339 61 aa8.4□□□□□ -1.06
SDHAF1-201ENST00000378887 V9GYY9 64 aa8.37□□□□□ -1.07
SDHAF1-201ENST00000378887 RPS28P62857 69 aaKnown RBP8.36□□□□□ -1.07
SDHAF1-201ENST00000378887 PP632Q6XCG6 107 aa8.24□□□□□ -1.09
SDHAF1-201ENST00000378887 KRTAP4-3Q9BYR4 195 aa8.24□□□□□ -1.09
SDHAF1-201ENST00000378887 KRTAP12-3P60328 96 aa8.22□□□□□ -1.09
SDHAF1-201ENST00000378887 KRTAP25-1Q3LHN0 102 aa8.18□□□□□ -1.1
SDHAF1-201ENST00000378887 KRTAP4-7Q9BYR0 210 aa8.12□□□□□ -1.11
SDHAF1-201ENST00000378887 KRTAP4-9Q9BYQ8 210 aa8.06□□□□□ -1.12
SDHAF1-201ENST00000378887 A6NED7 52 aa8.04□□□□□ -1.12
SDHAF1-201ENST00000378887 K7ERS5 55 aa8.04□□□□□ -1.12
SDHAF1-201ENST00000378887 KRTAP5-4Q6L8H1 288 aa7.99□□□□□ -1.13
SDHAF1-201ENST00000378887 KRTAP23-1A1A580 65 aa7.95□□□□□ -1.14
SDHAF1-201ENST00000378887 HMCN1Q96RW7 5635 aa7.94□□□□□ -1.14
SDHAF1-201ENST00000378887 LCE1DQ5T752 114 aa7.93□□□□□ -1.14
SDHAF1-201ENST00000378887 LCE4AQ5TA78 99 aa7.91□□□□□ -1.14
SDHAF1-201ENST00000378887 KRTAP5-5Q701N2 237 aaPredicted RBP7.81□□□□□ -1.16
SDHAF1-201ENST00000378887 CDC42SE1Q9NRR8 79 aa7.8□□□□□ -1.16
SDHAF1-201ENST00000378887 MT4P47944 62 aa7.77□□□□□ -1.17
SDHAF1-201ENST00000378887 ROMO1P60602 79 aa7.74□□□□□ -1.17
SDHAF1-201ENST00000378887 KRTAP15-1Q3LI76 137 aa7.73□□□□□ -1.17
SDHAF1-201ENST00000378887 KRTAP4-6Q9BYQ5 205 aa7.72□□□□□ -1.17
SDHAF1-201ENST00000378887 KRTAP19-4Q3LI73 84 aa7.71□□□□□ -1.18
SDHAF1-201ENST00000378887 GPR98Q8WXG9 6306 aa7.7□□□□□ -1.18
SDHAF1-201ENST00000378887 LOC100996750A0A140TA64 210 aa7.67□□□□□ -1.18
SDHAF1-201ENST00000378887 LCE3CQ5T5A8 94 aa7.61□□□□□ -1.19
SDHAF1-201ENST00000378887 AHNAK2Q8IVF2 5795 aa7.58□□□□□ -1.2
SDHAF1-201ENST00000378887 SYNE1Q8NF91 8797 aaKnown RBP7.44□□□□□ -1.22
SDHAF1-201ENST00000378887 KRTAP20-2Q3LI61 65 aa7.44□□□□□ -1.22
SDHAF1-201ENST00000378887 SPRR5A0A1B0GTR4 108 aa7.4□□□□□ -1.22
SDHAF1-201ENST00000378887 KRTAP9-6A8MVA2 160 aa7.38□□□□□ -1.23
SDHAF1-201ENST00000378887 KRTAP5-10Q6L8G5 202 aa7.34□□□□□ -1.23
SDHAF1-201ENST00000378887 BRK1Q8WUW1 75 aa7.31□□□□□ -1.24
SDHAF1-201ENST00000378887 KRTAP5-3Q6L8H2 238 aa7.3□□□□□ -1.24
SDHAF1-201ENST00000378887 KRTAP12-4P60329 112 aa7.25□□□□□ -1.25
SDHAF1-201ENST00000378887 MT1AP04731 61 aa7.19□□□□□ -1.26
SDHAF1-201ENST00000378887 KRTAP6-1Q3LI64 71 aa7.19□□□□□ -1.26
SDHAF1-201ENST00000378887 KRTAP5-2Q701N4 177 aa7.06□□□□□ -1.28
SDHAF1-201ENST00000378887 KRTAP5-7Q6L8G8 165 aa6.99□□□□□ -1.29
SDHAF1-201ENST00000378887 PRO0628Q9UI54 55 aa6.94□□□□□ -1.3
SDHAF1-201ENST00000378887 PMAIP1Q13794 54 aa6.92□□□□□ -1.3
SDHAF1-201ENST00000378887 KRTAP9-4Q9BYQ2 154 aa6.92□□□□□ -1.3
SDHAF1-201ENST00000378887 KRTAP6-2Q3LI66 62 aa6.78□□□□□ -1.32
SDHAF1-201ENST00000378887 KRTAP4-11Q9BYQ6 195 aa6.72□□□□□ -1.33
SDHAF1-201ENST00000378887 KRTAP5-8O75690 187 aa6.57□□□□□ -1.36
SDHAF1-201ENST00000378887 PRAC1Q96KF2 57 aa6.52□□□□□ -1.37
SDHAF1-201ENST00000378887 KTN1-AS1Q86SY8 53 aa6.51□□□□□ -1.37
SDHAF1-201ENST00000378887 MT3P25713 68 aa6.48□□□□□ -1.37
SDHAF1-201ENST00000378887 SVIPQ8NHG7 77 aa6.45□□□□□ -1.38
SDHAF1-201ENST00000378887 OBSCNQ5VST9 7968 aa6.42□□□□□ -1.38
SDHAF1-201ENST00000378887 KRTAP5-1Q6L8H4 278 aa6.28□□□□□ -1.4
SDHAF1-201ENST00000378887 MUC5BQ9HC84 5762 aaPredicted RBP6.23□□□□□ -1.41
SDHAF1-201ENST00000378887 MUC5ACP98088 5654 aa6.22□□□□□ -1.41
SDHAF1-201ENST00000378887 AHNAKQ09666 5890 aaKnown RBP6.14□□□□□ -1.43
SDHAF1-201ENST00000378887 LCE1EQ5T753 118 aa5.99□□□□□ -1.45
SDHAF1-201ENST00000378887 KRTAP9-9Q9BYP9 154 aa5.99□□□□□ -1.45
SDHAF1-201ENST00000378887 KRTAP4-2Q9BYR5 136 aa5.75□□□□□ -1.49
SDHAF1-201ENST00000378887 LCE1CQ5T751 118 aa5.58□□□□□ -1.52
SDHAF1-201ENST00000378887 LCE1BQ5T7P3 118 aa5.58□□□□□ -1.52
SDHAF1-201ENST00000378887 LUZP6Q538Z0 58 aa5.47□□□□□ -1.53
SDHAF1-201ENST00000378887 LCE3DQ9BYE3 92 aa5.45□□□□□ -1.54
SDHAF1-201ENST00000378887 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.17□□□□□ -1.58
SDHAF1-201ENST00000378887 LCE3EQ5T5B0 92 aa5.16□□□□□ -1.58
SDHAF1-201ENST00000378887 KRTAP5-11Q6L8G4 156 aa5.06□□□□□ -1.6
SDHAF1-201ENST00000378887 KRTAP4-12Q9BQ66 201 aa5.01□□□□□ -1.61
SDHAF1-201ENST00000378887 NDUFAF8A1L188 74 aa4.85□□□□□ -1.63
SDHAF1-201ENST00000378887 LCE1FQ5T754 118 aa4.8□□□□□ -1.64
SDHAF1-201ENST00000378887 KRTAP21-2Q3LI59 83 aa4.79□□□□□ -1.64
SDHAF1-201ENST00000378887 H3BS24 57 aa4.78□□□□□ -1.64
SDHAF1-201ENST00000378887 A0A0A0MQY5 61 aa4.66□□□□□ -1.66
SDHAF1-201ENST00000378887 PHGR1C9JFL3 82 aa4.36□□□□□ -1.71
SDHAF1-201ENST00000378887 KRTAP4-4Q9BYR3 166 aa4.26□□□□□ -1.73
SDHAF1-201ENST00000378887 INE1O15225 51 aa4.11□□□□□ -1.75
SDHAF1-201ENST00000378887 PRM1P04553 51 aa4□□□□□ -1.77
SDHAF1-201ENST00000378887 MUC19Q7Z5P9 8384 aa3.94□□□□□ -1.78
SDHAF1-201ENST00000378887 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
SDHAF1-201ENST00000378887 MUC16Q8WXI7 14507 aa2.9□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 61.1 ms