RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 LCE3AQ5TA76 89 aa6.86□□□□□ -1.31
TMEM88B-201ENST00000378821 KRTAP4-9Q9BYQ8 210 aa6.8□□□□□ -1.32
TMEM88B-201ENST00000378821 RPS28P62857 69 aaKnown RBP6.79□□□□□ -1.32
TMEM88B-201ENST00000378821 K7ERS5 55 aa6.76□□□□□ -1.33
TMEM88B-201ENST00000378821 PP632Q6XCG6 107 aa6.76□□□□□ -1.33
TMEM88B-201ENST00000378821 A6NED7 52 aa6.74□□□□□ -1.33
TMEM88B-201ENST00000378821 MT1MQ8N339 61 aa6.72□□□□□ -1.33
TMEM88B-201ENST00000378821 MT1LQ93083 61 aa6.72□□□□□ -1.33
TMEM88B-201ENST00000378821 LCE1DQ5T752 114 aa6.67□□□□□ -1.34
TMEM88B-201ENST00000378821 KRTAP25-1Q3LHN0 102 aa6.65□□□□□ -1.34
TMEM88B-201ENST00000378821 LCE4AQ5TA78 99 aa6.65□□□□□ -1.34
TMEM88B-201ENST00000378821 KRTAP12-3P60328 96 aa6.58□□□□□ -1.36
TMEM88B-201ENST00000378821 KRTAP5-4Q6L8H1 288 aa6.55□□□□□ -1.36
TMEM88B-201ENST00000378821 KRTAP4-3Q9BYR4 195 aa6.53□□□□□ -1.36
TMEM88B-201ENST00000378821 MT4P47944 62 aa6.52□□□□□ -1.37
TMEM88B-201ENST00000378821 HMCN1Q96RW7 5635 aa6.5□□□□□ -1.37
TMEM88B-201ENST00000378821 CDC42SE1Q9NRR8 79 aa6.47□□□□□ -1.37
TMEM88B-201ENST00000378821 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
TMEM88B-201ENST00000378821 ROMO1P60602 79 aa6.38□□□□□ -1.39
TMEM88B-201ENST00000378821 KRTAP4-6Q9BYQ5 205 aa6.38□□□□□ -1.39
TMEM88B-201ENST00000378821 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
TMEM88B-201ENST00000378821 KRTAP5-10Q6L8G5 202 aa6.3□□□□□ -1.4
TMEM88B-201ENST00000378821 AHNAK2Q8IVF2 5795 aa6.26□□□□□ -1.41
TMEM88B-201ENST00000378821 KRTAP5-5Q701N2 237 aaPredicted RBP6.23□□□□□ -1.41
TMEM88B-201ENST00000378821 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
TMEM88B-201ENST00000378821 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
TMEM88B-201ENST00000378821 KRTAP20-2Q3LI61 65 aa6.14□□□□□ -1.43
TMEM88B-201ENST00000378821 SPRR5A0A1B0GTR4 108 aa6.13□□□□□ -1.43
TMEM88B-201ENST00000378821 KRTAP5-3Q6L8H2 238 aa6.11□□□□□ -1.43
TMEM88B-201ENST00000378821 KRTAP5-7Q6L8G8 165 aa6.09□□□□□ -1.43
TMEM88B-201ENST00000378821 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
TMEM88B-201ENST00000378821 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
TMEM88B-201ENST00000378821 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
TMEM88B-201ENST00000378821 BRK1Q8WUW1 75 aa6.02□□□□□ -1.45
TMEM88B-201ENST00000378821 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
TMEM88B-201ENST00000378821 KRTAP9-6A8MVA2 160 aa5.77□□□□□ -1.49
TMEM88B-201ENST00000378821 MT1AP04731 61 aa5.72□□□□□ -1.49
TMEM88B-201ENST00000378821 KRTAP5-2Q701N4 177 aa5.72□□□□□ -1.49
TMEM88B-201ENST00000378821 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
TMEM88B-201ENST00000378821 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.5
TMEM88B-201ENST00000378821 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
TMEM88B-201ENST00000378821 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
TMEM88B-201ENST00000378821 KRTAP5-8O75690 187 aa5.48□□□□□ -1.53
TMEM88B-201ENST00000378821 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
TMEM88B-201ENST00000378821 PRAC1Q96KF2 57 aa5.45□□□□□ -1.54
TMEM88B-201ENST00000378821 PRO0628Q9UI54 55 aa5.4□□□□□ -1.54
TMEM88B-201ENST00000378821 AHNAKQ09666 5890 aaKnown RBP5.36□□□□□ -1.55
TMEM88B-201ENST00000378821 MUC5ACP98088 5654 aa5.3□□□□□ -1.56
TMEM88B-201ENST00000378821 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
TMEM88B-201ENST00000378821 MT3P25713 68 aa5.23□□□□□ -1.57
TMEM88B-201ENST00000378821 MUC5BQ9HC84 5762 aaPredicted RBP5.21□□□□□ -1.58
TMEM88B-201ENST00000378821 KRTAP9-9Q9BYP9 154 aa5.17□□□□□ -1.58
TMEM88B-201ENST00000378821 KRTAP5-1Q6L8H4 278 aa5.15□□□□□ -1.59
TMEM88B-201ENST00000378821 KTN1-AS1Q86SY8 53 aa5.14□□□□□ -1.59
TMEM88B-201ENST00000378821 SVIPQ8NHG7 77 aa4.91□□□□□ -1.62
TMEM88B-201ENST00000378821 LCE1EQ5T753 118 aa4.89□□□□□ -1.63
TMEM88B-201ENST00000378821 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
TMEM88B-201ENST00000378821 LCE1CQ5T751 118 aa4.53□□□□□ -1.68
TMEM88B-201ENST00000378821 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
TMEM88B-201ENST00000378821 LUZP6Q538Z0 58 aa4.5□□□□□ -1.69
TMEM88B-201ENST00000378821 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
TMEM88B-201ENST00000378821 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
TMEM88B-201ENST00000378821 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
TMEM88B-201ENST00000378821 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.14□□□□□ -1.75
TMEM88B-201ENST00000378821 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
TMEM88B-201ENST00000378821 LCE1FQ5T754 118 aa4.05□□□□□ -1.76
TMEM88B-201ENST00000378821 NDUFAF8A1L188 74 aa3.82□□□□□ -1.8
TMEM88B-201ENST00000378821 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
TMEM88B-201ENST00000378821 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
TMEM88B-201ENST00000378821 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
TMEM88B-201ENST00000378821 PRM1P04553 51 aa3.3□□□□□ -1.88
TMEM88B-201ENST00000378821 MUC19Q7Z5P9 8384 aa3.23□□□□□ -1.89
TMEM88B-201ENST00000378821 INE1O15225 51 aa3.06□□□□□ -1.92
TMEM88B-201ENST00000378821 A0A0A0MQY5 61 aa3.05□□□□□ -1.92
TMEM88B-201ENST00000378821 KRTAP21-1Q3LI58 79 aa2.8□□□□□ -1.96
TMEM88B-201ENST00000378821 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
TMEM88B-201ENST00000378821 H3BS24 57 aa2.09□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 186.5 ms