RNA–Protein interactions for RNA: ENST00000378308.6

USP9X-202, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP9X, Length 8,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-202ENST00000378308 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.79
USP9X-202ENST00000378308 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.79
USP9X-202ENST00000378308 LRP2P98164 4655 aa3.8□□□□□ -1.8
USP9X-202ENST00000378308 MUC17Q685J3 4493 aa3.75□□□□□ -1.81
USP9X-202ENST00000378308 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
USP9X-202ENST00000378308 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
USP9X-202ENST00000378308 KRTAP2-1Q9BYU5 128 aa3.74□□□□□ -1.81
USP9X-202ENST00000378308 RYR3Q15413 4870 aa3.7□□□□□ -1.82
USP9X-202ENST00000378308 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
USP9X-202ENST00000378308 MT1AP04731 61 aa3.66□□□□□ -1.82
USP9X-202ENST00000378308 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
USP9X-202ENST00000378308 KRTAP19-2Q3LHN2 52 aa3.55□□□□□ -1.84
USP9X-202ENST00000378308 HYDINQ4G0P3 5121 aa3.54□□□□□ -1.84
USP9X-202ENST00000378308 LCE4AQ5TA78 99 aa3.52□□□□□ -1.85
USP9X-202ENST00000378308 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
USP9X-202ENST00000378308 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
USP9X-202ENST00000378308 KMT2CQ8NEZ4 4911 aaKnown RBP3.49□□□□□ -1.85
USP9X-202ENST00000378308 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
USP9X-202ENST00000378308 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
USP9X-202ENST00000378308 KRTAP2-2Q9BYT5 123 aa3.42□□□□□ -1.86
USP9X-202ENST00000378308 KRTAP6-3Q3LI67 103 aa3.42□□□□□ -1.86
USP9X-202ENST00000378308 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
USP9X-202ENST00000378308 LCE2AQ5TA79 106 aaPredicted RBP3.35□□□□□ -1.87
USP9X-202ENST00000378308 FSIP2Q5CZC0 6907 aa3.25□□□□□ -1.89
USP9X-202ENST00000378308 HERC2O95714 4834 aa3.24□□□□□ -1.89
USP9X-202ENST00000378308 PCLOQ9Y6V0 5065 aa3.22□□□□□ -1.89
USP9X-202ENST00000378308 BIRC6Q9NR09 4857 aa3.21□□□□□ -1.9
USP9X-202ENST00000378308 KRTAP9-6A8MVA2 160 aa3.18□□□□□ -1.9
USP9X-202ENST00000378308 HMCN2Q8NDA2 5059 aa3.18□□□□□ -1.9
USP9X-202ENST00000378308 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
USP9X-202ENST00000378308 KRTAP4-11Q9BYQ6 195 aa3.12□□□□□ -1.91
USP9X-202ENST00000378308 RYR2Q92736 4967 aa3.09□□□□□ -1.92
USP9X-202ENST00000378308 HERC1Q15751 4861 aa3.08□□□□□ -1.92
USP9X-202ENST00000378308 KRTAP4-4Q9BYR3 166 aa2.97□□□□□ -1.93
USP9X-202ENST00000378308 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.93
USP9X-202ENST00000378308 SYNE1Q8NF91 8797 aaKnown RBP2.93□□□□□ -1.94
USP9X-202ENST00000378308 MUC2Q02817 5179 aa2.92□□□□□ -1.94
USP9X-202ENST00000378308 KRTAP4-12Q9BQ66 201 aa2.91□□□□□ -1.94
USP9X-202ENST00000378308 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
USP9X-202ENST00000378308 KIAA1109Q2LD37 5005 aa2.89□□□□□ -1.95
USP9X-202ENST00000378308 KMT2DO14686 5537 aa2.8□□□□□ -1.96
USP9X-202ENST00000378308 EPPK1P58107 5090 aaKnown RBP2.73□□□□□ -1.97
USP9X-202ENST00000378308 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
USP9X-202ENST00000378308 DSTQ03001 7570 aaKnown RBP2.7□□□□□ -1.98
USP9X-202ENST00000378308 ABCA13Q86UQ4 5058 aa2.67□□□□□ -1.98
USP9X-202ENST00000378308 FAT4Q6V0I7 4981 aa2.66□□□□□ -1.98
USP9X-202ENST00000378308 UBR4Q5T4S7 5183 aa2.62□□□□□ -1.99
USP9X-202ENST00000378308 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
USP9X-202ENST00000378308 MACF1Q9UPN3 7388 aaKnown RBP2.58□□□□□ -2
USP9X-202ENST00000378308 NEBP20929 6669 aa2.57□□□□□ -2
USP9X-202ENST00000378308 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
USP9X-202ENST00000378308 RNF213Q63HN8 5207 aa2.55□□□□□ -2
USP9X-202ENST00000378308 FCGBPQ9Y6R7 5405 aaPredicted RBP2.49□□□□□ -2.01
USP9X-202ENST00000378308 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
USP9X-202ENST00000378308 SSPOA2VEC9 5147 aa2.36□□□□□ -2.03
USP9X-202ENST00000378308 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
USP9X-202ENST00000378308 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
USP9X-202ENST00000378308 MDN1Q9NU22 5596 aa2.2□□□□□ -2.06
USP9X-202ENST00000378308 KRTAP5-3Q6L8H2 238 aa2.18□□□□□ -2.06
USP9X-202ENST00000378308 USH2AO75445 5202 aa2.16□□□□□ -2.06
USP9X-202ENST00000378308 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.08
USP9X-202ENST00000378308 KRTAP5-8O75690 187 aa2.05□□□□□ -2.08
USP9X-202ENST00000378308 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
USP9X-202ENST00000378308 KRTAP5-10Q6L8G5 202 aa1.88□□□□□ -2.11
USP9X-202ENST00000378308 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
USP9X-202ENST00000378308 GPR98Q8WXG9 6306 aa1.79□□□□□ -2.12
USP9X-202ENST00000378308 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
USP9X-202ENST00000378308 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
USP9X-202ENST00000378308 HMCN1Q96RW7 5635 aa1.67□□□□□ -2.14
USP9X-202ENST00000378308 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.14
USP9X-202ENST00000378308 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
USP9X-202ENST00000378308 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.16
USP9X-202ENST00000378308 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
USP9X-202ENST00000378308 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
USP9X-202ENST00000378308 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.41□□□□□ -2.18
USP9X-202ENST00000378308 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
USP9X-202ENST00000378308 KRTAP5-7Q6L8G8 165 aa1.2□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 72.9 ms