RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 LCE4AQ5TA78 99 aa1.78□□□□□ -2.12
CUBN-202ENST00000377833 FAT1Q14517 4588 aa1.77□□□□□ -2.13
CUBN-202ENST00000377833 MYCBP2O75592 4640 aa1.76□□□□□ -2.13
CUBN-202ENST00000377833 LCE2AQ5TA79 106 aaPredicted RBP1.75□□□□□ -2.13
CUBN-202ENST00000377833 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
CUBN-202ENST00000377833 KRTAP9-6A0A140TA67 174 aa1.73□□□□□ -2.13
CUBN-202ENST00000377833 FAT3Q8TDW7 4589 aa1.73□□□□□ -2.13
CUBN-202ENST00000377833 FAT4Q6V0I7 4981 aa1.73□□□□□ -2.13
CUBN-202ENST00000377833 MUC17Q685J3 4493 aa1.73□□□□□ -2.13
CUBN-202ENST00000377833 MUC12Q9UKN1 5478 aa1.73□□□□□ -2.13
CUBN-202ENST00000377833 HERC2O95714 4834 aa1.72□□□□□ -2.13
CUBN-202ENST00000377833 KRTAP9-2Q9BYQ4 174 aa1.72□□□□□ -2.13
CUBN-202ENST00000377833 KRTAP19-7Q3SYF9 63 aa1.71□□□□□ -2.14
CUBN-202ENST00000377833 KRTAP4-8A0A0G2JLE6 195 aa1.71□□□□□ -2.14
CUBN-202ENST00000377833 KRTAP4-8Q9BYQ9 185 aa1.71□□□□□ -2.14
CUBN-202ENST00000377833 LCE5AQ5TCM9 118 aa1.71□□□□□ -2.14
CUBN-202ENST00000377833 KRTAP20-1Q3LI63 56 aa1.69□□□□□ -2.14
CUBN-202ENST00000377833 KRTAP4-7Q9BYR0 210 aa1.68□□□□□ -2.14
CUBN-202ENST00000377833 PRM1P04553 51 aa1.68□□□□□ -2.14
CUBN-202ENST00000377833 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
CUBN-202ENST00000377833 LCE1DQ5T752 114 aa1.63□□□□□ -2.15
CUBN-202ENST00000377833 LRP2P98164 4655 aa1.63□□□□□ -2.15
CUBN-202ENST00000377833 MDN1Q9NU22 5596 aa1.63□□□□□ -2.15
CUBN-202ENST00000377833 MT4P47944 62 aa1.62□□□□□ -2.15
CUBN-202ENST00000377833 KRTAP9-4Q9BYQ2 154 aa1.59□□□□□ -2.15
CUBN-202ENST00000377833 LOC100996750A0A140TA64 210 aa1.58□□□□□ -2.16
CUBN-202ENST00000377833 KRTAP2-2Q9BYT5 123 aa1.58□□□□□ -2.16
CUBN-202ENST00000377833 KRTAP9-6A8MVA2 160 aa1.56□□□□□ -2.16
CUBN-202ENST00000377833 KRTAP9-7A8MTY7 169 aa1.56□□□□□ -2.16
CUBN-202ENST00000377833 LPAP08519 4548 aa1.56□□□□□ -2.16
CUBN-202ENST00000377833 KRTAP5-9P26371 169 aa1.56□□□□□ -2.16
CUBN-202ENST00000377833 KRTAP4-3Q9BYR4 195 aa1.55□□□□□ -2.16
CUBN-202ENST00000377833 LCE1BQ5T7P3 118 aa1.55□□□□□ -2.16
CUBN-202ENST00000377833 KRTAP4-9Q9BYQ8 210 aa1.53□□□□□ -2.16
CUBN-202ENST00000377833 KRTAP6-2Q3LI66 62 aa1.52□□□□□ -2.17
CUBN-202ENST00000377833 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.52□□□□□ -2.17
CUBN-202ENST00000377833 KRTAP6-1Q3LI64 71 aa1.51□□□□□ -2.17
CUBN-202ENST00000377833 KMT2DO14686 5537 aa1.5□□□□□ -2.17
CUBN-202ENST00000377833 KRTAP9-9Q9BYP9 154 aa1.5□□□□□ -2.17
CUBN-202ENST00000377833 FCGBPQ9Y6R7 5405 aaPredicted RBP1.48□□□□□ -2.17
CUBN-202ENST00000377833 SYNE2Q8WXH0 6885 aaKnown RBP1.46□□□□□ -2.18
CUBN-202ENST00000377833 FSIP2Q5CZC0 6907 aa1.43□□□□□ -2.18
CUBN-202ENST00000377833 LCE1EQ5T753 118 aa1.41□□□□□ -2.18
CUBN-202ENST00000377833 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
CUBN-202ENST00000377833 KRTAP5-4Q6L8H1 288 aa1.37□□□□□ -2.19
CUBN-202ENST00000377833 LCE1CQ5T751 118 aa1.36□□□□□ -2.19
CUBN-202ENST00000377833 LCE1FQ5T754 118 aa1.36□□□□□ -2.19
CUBN-202ENST00000377833 KRTAP20-2Q3LI61 65 aa1.32□□□□□ -2.2
CUBN-202ENST00000377833 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
CUBN-202ENST00000377833 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
CUBN-202ENST00000377833 NEBP20929 6669 aa1.29□□□□□ -2.2
CUBN-202ENST00000377833 GPR98Q8WXG9 6306 aa1.25□□□□□ -2.21
CUBN-202ENST00000377833 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
CUBN-202ENST00000377833 KRTAP5-5Q701N2 237 aaPredicted RBP1.24□□□□□ -2.21
CUBN-202ENST00000377833 KRTAP4-11Q9BYQ6 195 aa1.24□□□□□ -2.21
CUBN-202ENST00000377833 KRTAP5-3Q6L8H2 238 aa1.23□□□□□ -2.21
CUBN-202ENST00000377833 HMCN1Q96RW7 5635 aa1.23□□□□□ -2.21
CUBN-202ENST00000377833 OBSCNQ5VST9 7968 aa1.21□□□□□ -2.22
CUBN-202ENST00000377833 MUC5BQ9HC84 5762 aaPredicted RBP1.18□□□□□ -2.22
CUBN-202ENST00000377833 DSTQ03001 7570 aaKnown RBP1.18□□□□□ -2.22
CUBN-202ENST00000377833 MUC5ACP98088 5654 aa1.14□□□□□ -2.23
CUBN-202ENST00000377833 KRTAP4-6Q9BYQ5 205 aa1.14□□□□□ -2.23
CUBN-202ENST00000377833 KRTAP5-2Q701N4 177 aa1.09□□□□□ -2.24
CUBN-202ENST00000377833 KRTAP4-2Q9BYR5 136 aa1.06□□□□□ -2.24
CUBN-202ENST00000377833 KRTAP5-11Q6L8G4 156 aa1.05□□□□□ -2.24
CUBN-202ENST00000377833 KRTAP5-8O75690 187 aa1.03□□□□□ -2.24
CUBN-202ENST00000377833 KRTAP4-4Q9BYR3 166 aa1.03□□□□□ -2.24
CUBN-202ENST00000377833 MUC19Q7Z5P9 8384 aa1.03□□□□□ -2.25
CUBN-202ENST00000377833 KRTAP5-6Q6L8G9 129 aaPredicted RBP1□□□□□ -2.25
CUBN-202ENST00000377833 KRTAP5-10Q6L8G5 202 aa1□□□□□ -2.25
CUBN-202ENST00000377833 KRTAP4-12Q9BQ66 201 aa0.94□□□□□ -2.26
CUBN-202ENST00000377833 KRTAP5-7Q6L8G8 165 aa0.9□□□□□ -2.27
CUBN-202ENST00000377833 KRTAP5-1Q6L8H4 278 aa0.87□□□□□ -2.27
CUBN-202ENST00000377833 PHGR1C9JFL3 82 aa0.84□□□□□ -2.27
CUBN-202ENST00000377833 KRTAP21-2Q3LI59 83 aa0.84□□□□□ -2.28
CUBN-202ENST00000377833 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
CUBN-202ENST00000377833 MUC16Q8WXI7 14507 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 96.1 ms