RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 KRTAP4-7Q9BYR0 210 aa3.68□□□□□ -1.82
ABCF1-202ENST00000376545 KRTAP9-2Q9BYQ4 174 aa3.64□□□□□ -1.83
ABCF1-202ENST00000376545 CRCT1Q9UGL9 99 aa3.51□□□□□ -1.85
ABCF1-202ENST00000376545 DSTQ03001 7570 aaKnown RBP3.47□□□□□ -1.85
ABCF1-202ENST00000376545 KRTAP9-6A0A140TA67 174 aa3.47□□□□□ -1.85
ABCF1-202ENST00000376545 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.86
ABCF1-202ENST00000376545 MT1MQ8N339 61 aa3.46□□□□□ -1.86
ABCF1-202ENST00000376545 MT1GP13640 62 aa3.45□□□□□ -1.86
ABCF1-202ENST00000376545 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
ABCF1-202ENST00000376545 LOC100996750A0A140TA64 210 aa3.44□□□□□ -1.86
ABCF1-202ENST00000376545 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
ABCF1-202ENST00000376545 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
ABCF1-202ENST00000376545 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
ABCF1-202ENST00000376545 LCE5AQ5TCM9 118 aa3.37□□□□□ -1.87
ABCF1-202ENST00000376545 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
ABCF1-202ENST00000376545 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.3□□□□□ -1.88
ABCF1-202ENST00000376545 SYNE2Q8WXH0 6885 aaKnown RBP3.28□□□□□ -1.88
ABCF1-202ENST00000376545 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
ABCF1-202ENST00000376545 SPRR2FQ96RM1 72 aa3.25□□□□□ -1.89
ABCF1-202ENST00000376545 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
ABCF1-202ENST00000376545 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
ABCF1-202ENST00000376545 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
ABCF1-202ENST00000376545 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
ABCF1-202ENST00000376545 MT1AP04731 61 aa3.17□□□□□ -1.9
ABCF1-202ENST00000376545 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
ABCF1-202ENST00000376545 LCE3BQ5TA77 95 aa3.12□□□□□ -1.91
ABCF1-202ENST00000376545 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
ABCF1-202ENST00000376545 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
ABCF1-202ENST00000376545 KRTAP9-7A8MTY7 169 aa3.1□□□□□ -1.91
ABCF1-202ENST00000376545 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
ABCF1-202ENST00000376545 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
ABCF1-202ENST00000376545 LCE3EQ5T5B0 92 aa2.97□□□□□ -1.93
ABCF1-202ENST00000376545 SPRR2EP22531 72 aa2.96□□□□□ -1.94
ABCF1-202ENST00000376545 SPRR2BP35325 72 aa2.96□□□□□ -1.94
ABCF1-202ENST00000376545 SPRR2AP35326 72 aa2.96□□□□□ -1.94
ABCF1-202ENST00000376545 PRM1P04553 51 aa2.95□□□□□ -1.94
ABCF1-202ENST00000376545 KRTAP9-4Q9BYQ2 154 aa2.95□□□□□ -1.94
ABCF1-202ENST00000376545 NEBP20929 6669 aa2.92□□□□□ -1.94
ABCF1-202ENST00000376545 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.95
ABCF1-202ENST00000376545 KRTAP5-4Q6L8H1 288 aa2.88□□□□□ -1.95
ABCF1-202ENST00000376545 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
ABCF1-202ENST00000376545 SPRR2DP22532 72 aa2.83□□□□□ -1.96
ABCF1-202ENST00000376545 KRTAP20-1Q3LI63 56 aa2.79□□□□□ -1.96
ABCF1-202ENST00000376545 LCE4AQ5TA78 99 aa2.79□□□□□ -1.96
ABCF1-202ENST00000376545 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
ABCF1-202ENST00000376545 MT3P25713 68 aa2.78□□□□□ -1.96
ABCF1-202ENST00000376545 LCE1DQ5T752 114 aa2.72□□□□□ -1.97
ABCF1-202ENST00000376545 KRTAP5-2Q701N4 177 aa2.61□□□□□ -1.99
ABCF1-202ENST00000376545 MT4P47944 62 aa2.56□□□□□ -2
ABCF1-202ENST00000376545 MUC19Q7Z5P9 8384 aa2.56□□□□□ -2
ABCF1-202ENST00000376545 KRTAP4-6Q9BYQ5 205 aa2.55□□□□□ -2
ABCF1-202ENST00000376545 KRTAP5-3Q6L8H2 238 aa2.54□□□□□ -2
ABCF1-202ENST00000376545 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
ABCF1-202ENST00000376545 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
ABCF1-202ENST00000376545 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
ABCF1-202ENST00000376545 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
ABCF1-202ENST00000376545 MUC5ACP98088 5654 aa2.34□□□□□ -2.04
ABCF1-202ENST00000376545 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
ABCF1-202ENST00000376545 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
ABCF1-202ENST00000376545 KRTAP5-1Q6L8H4 278 aa2.25□□□□□ -2.05
ABCF1-202ENST00000376545 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
ABCF1-202ENST00000376545 KRTAP4-11Q9BYQ6 195 aa2.23□□□□□ -2.05
ABCF1-202ENST00000376545 KRTAP9-9Q9BYP9 154 aa2.21□□□□□ -2.06
ABCF1-202ENST00000376545 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
ABCF1-202ENST00000376545 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
ABCF1-202ENST00000376545 KRTAP4-2Q9BYR5 136 aa2.18□□□□□ -2.06
ABCF1-202ENST00000376545 GPR98Q8WXG9 6306 aa2.12□□□□□ -2.07
ABCF1-202ENST00000376545 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
ABCF1-202ENST00000376545 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
ABCF1-202ENST00000376545 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.09
ABCF1-202ENST00000376545 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
ABCF1-202ENST00000376545 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
ABCF1-202ENST00000376545 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
ABCF1-202ENST00000376545 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
ABCF1-202ENST00000376545 KRTAP4-12Q9BQ66 201 aa1.83□□□□□ -2.12
ABCF1-202ENST00000376545 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
ABCF1-202ENST00000376545 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 71.3 ms