RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 PP632Q6XCG6 107 aa5.06□□□□□ -1.6
CLCN6-203ENST00000376490 MT1MQ8N339 61 aa5.05□□□□□ -1.6
CLCN6-203ENST00000376490 MIR22HGQ0VDD5 57 aa5.02□□□□□ -1.61
CLCN6-203ENST00000376490 V9GYY9 64 aa5□□□□□ -1.61
CLCN6-203ENST00000376490 KRTAP4-9Q9BYQ8 210 aa4.99□□□□□ -1.61
CLCN6-203ENST00000376490 KRTAP4-3Q9BYR4 195 aa4.97□□□□□ -1.61
CLCN6-203ENST00000376490 PSPHP1O15172 72 aa4.96□□□□□ -1.62
CLCN6-203ENST00000376490 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
CLCN6-203ENST00000376490 Q1T7F1 81 aa4.93□□□□□ -1.62
CLCN6-203ENST00000376490 K7ERS5 55 aa4.89□□□□□ -1.63
CLCN6-203ENST00000376490 KRTAP25-1Q3LHN0 102 aa4.88□□□□□ -1.63
CLCN6-203ENST00000376490 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
CLCN6-203ENST00000376490 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
CLCN6-203ENST00000376490 AHNAK2Q8IVF2 5795 aa4.86□□□□□ -1.63
CLCN6-203ENST00000376490 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
CLCN6-203ENST00000376490 RPS28P62857 69 aaKnown RBP4.84□□□□□ -1.63
CLCN6-203ENST00000376490 HMCN1Q96RW7 5635 aa4.84□□□□□ -1.64
CLCN6-203ENST00000376490 MT4P47944 62 aa4.82□□□□□ -1.64
CLCN6-203ENST00000376490 KRTAP5-10Q6L8G5 202 aa4.79□□□□□ -1.64
CLCN6-203ENST00000376490 KRTAP5-4Q6L8H1 288 aa4.78□□□□□ -1.64
CLCN6-203ENST00000376490 A6NED7 52 aa4.77□□□□□ -1.65
CLCN6-203ENST00000376490 H3BS24 57 aa4.75□□□□□ -1.65
CLCN6-203ENST00000376490 KRTAP5-7Q6L8G8 165 aa4.71□□□□□ -1.66
CLCN6-203ENST00000376490 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.66
CLCN6-203ENST00000376490 KRTAP23-1A1A580 65 aa4.69□□□□□ -1.66
CLCN6-203ENST00000376490 CDC42SE1Q9NRR8 79 aa4.64□□□□□ -1.67
CLCN6-203ENST00000376490 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
CLCN6-203ENST00000376490 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
CLCN6-203ENST00000376490 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
CLCN6-203ENST00000376490 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
CLCN6-203ENST00000376490 ROMO1P60602 79 aa4.58□□□□□ -1.68
CLCN6-203ENST00000376490 LCE3CQ5T5A8 94 aa4.56□□□□□ -1.68
CLCN6-203ENST00000376490 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
CLCN6-203ENST00000376490 KRTAP20-2Q3LI61 65 aa4.51□□□□□ -1.69
CLCN6-203ENST00000376490 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
CLCN6-203ENST00000376490 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
CLCN6-203ENST00000376490 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
CLCN6-203ENST00000376490 BRK1Q8WUW1 75 aa4.37□□□□□ -1.71
CLCN6-203ENST00000376490 PRO0628Q9UI54 55 aa4.37□□□□□ -1.71
CLCN6-203ENST00000376490 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
CLCN6-203ENST00000376490 MT1AP04731 61 aa4.31□□□□□ -1.72
CLCN6-203ENST00000376490 KRTAP6-1Q3LI64 71 aa4.31□□□□□ -1.72
CLCN6-203ENST00000376490 A0A0A0MQY5 61 aa4.28□□□□□ -1.72
CLCN6-203ENST00000376490 AHNAKQ09666 5890 aaKnown RBP4.27□□□□□ -1.73
CLCN6-203ENST00000376490 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
CLCN6-203ENST00000376490 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
CLCN6-203ENST00000376490 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
CLCN6-203ENST00000376490 MUC5BQ9HC84 5762 aaPredicted RBP4.13□□□□□ -1.75
CLCN6-203ENST00000376490 PMAIP1Q13794 54 aa4.13□□□□□ -1.75
CLCN6-203ENST00000376490 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
CLCN6-203ENST00000376490 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
CLCN6-203ENST00000376490 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
CLCN6-203ENST00000376490 KTN1-AS1Q86SY8 53 aa3.96□□□□□ -1.78
CLCN6-203ENST00000376490 MT3P25713 68 aa3.95□□□□□ -1.78
CLCN6-203ENST00000376490 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
CLCN6-203ENST00000376490 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
CLCN6-203ENST00000376490 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
CLCN6-203ENST00000376490 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
CLCN6-203ENST00000376490 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
CLCN6-203ENST00000376490 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
CLCN6-203ENST00000376490 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
CLCN6-203ENST00000376490 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
CLCN6-203ENST00000376490 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
CLCN6-203ENST00000376490 LCE3DQ9BYE3 92 aa3.29□□□□□ -1.88
CLCN6-203ENST00000376490 KRTAP4-12Q9BQ66 201 aa3.25□□□□□ -1.89
CLCN6-203ENST00000376490 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
CLCN6-203ENST00000376490 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
CLCN6-203ENST00000376490 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.04□□□□□ -1.92
CLCN6-203ENST00000376490 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
CLCN6-203ENST00000376490 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
CLCN6-203ENST00000376490 KRTAP21-2Q3LI59 83 aa2.83□□□□□ -1.96
CLCN6-203ENST00000376490 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
CLCN6-203ENST00000376490 INE1O15225 51 aa2.7□□□□□ -1.98
CLCN6-203ENST00000376490 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
CLCN6-203ENST00000376490 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
CLCN6-203ENST00000376490 PRM1P04553 51 aa2.35□□□□□ -2.03
CLCN6-203ENST00000376490 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
CLCN6-203ENST00000376490 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms