RNA–Protein interactions for RNA: ENST00000376279.7

PCCA-201, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 2 BASIC

Gene PCCA, Length 2,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-201ENST00000376279 KRTAP9-6A0A140TA67 174 aa6.38□□□□□ -1.39
PCCA-201ENST00000376279 KRTAP2-3P0C7H8 128 aa6.35□□□□□ -1.39
PCCA-201ENST00000376279 KRTAP2-4Q9BYR9 128 aa6.35□□□□□ -1.39
PCCA-201ENST00000376279 KRTAP2-1Q9BYU5 128 aa6.35□□□□□ -1.39
PCCA-201ENST00000376279 KRTAP4-3Q9BYR4 195 aa6.34□□□□□ -1.4
PCCA-201ENST00000376279 KRTAP19-3Q7Z4W3 81 aa6.3□□□□□ -1.4
PCCA-201ENST00000376279 MUC12Q9UKN1 5478 aa6.3□□□□□ -1.4
PCCA-201ENST00000376279 MT1MQ8N339 61 aa6.27□□□□□ -1.41
PCCA-201ENST00000376279 MT1GP13640 62 aa6.26□□□□□ -1.41
PCCA-201ENST00000376279 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
PCCA-201ENST00000376279 SPRR2FQ96RM1 72 aa6.18□□□□□ -1.42
PCCA-201ENST00000376279 CRCT1Q9UGL9 99 aa6.12□□□□□ -1.43
PCCA-201ENST00000376279 LCE5AQ5TCM9 118 aa6.11□□□□□ -1.43
PCCA-201ENST00000376279 MACF1Q9UPN3 7388 aaKnown RBP6.08□□□□□ -1.44
PCCA-201ENST00000376279 DSTQ03001 7570 aaKnown RBP5.96□□□□□ -1.45
PCCA-201ENST00000376279 SYNE2Q8WXH0 6885 aaKnown RBP5.88□□□□□ -1.47
PCCA-201ENST00000376279 KRTAP5-9P26371 169 aa5.8□□□□□ -1.48
PCCA-201ENST00000376279 LCE1AQ5T7P2 110 aa5.79□□□□□ -1.48
PCCA-201ENST00000376279 MDN1Q9NU22 5596 aa5.79□□□□□ -1.48
PCCA-201ENST00000376279 KRTAP12-4P60329 112 aa5.78□□□□□ -1.48
PCCA-201ENST00000376279 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.71□□□□□ -1.5
PCCA-201ENST00000376279 KRTAP9-7A8MTY7 169 aa5.7□□□□□ -1.5
PCCA-201ENST00000376279 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
PCCA-201ENST00000376279 SPRR2EP22531 72 aa5.68□□□□□ -1.5
PCCA-201ENST00000376279 SPRR2BP35325 72 aa5.68□□□□□ -1.5
PCCA-201ENST00000376279 SPRR2AP35326 72 aa5.68□□□□□ -1.5
PCCA-201ENST00000376279 KRTAP6-1Q3LI64 71 aa5.66□□□□□ -1.5
PCCA-201ENST00000376279 MT1AP04731 61 aa5.6□□□□□ -1.51
PCCA-201ENST00000376279 KRTAP5-5Q701N2 237 aaPredicted RBP5.56□□□□□ -1.52
PCCA-201ENST00000376279 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
PCCA-201ENST00000376279 SYNE1Q8NF91 8797 aaKnown RBP5.44□□□□□ -1.54
PCCA-201ENST00000376279 SPRR2DP22532 72 aa5.44□□□□□ -1.54
PCCA-201ENST00000376279 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.55
PCCA-201ENST00000376279 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
PCCA-201ENST00000376279 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
PCCA-201ENST00000376279 LCE3EQ5T5B0 92 aa5.22□□□□□ -1.57
PCCA-201ENST00000376279 PRM1P04553 51 aa5.15□□□□□ -1.58
PCCA-201ENST00000376279 KRTAP6-2Q3LI66 62 aa5.11□□□□□ -1.59
PCCA-201ENST00000376279 NEBP20929 6669 aa5.1□□□□□ -1.59
PCCA-201ENST00000376279 MT3P25713 68 aa5.04□□□□□ -1.6
PCCA-201ENST00000376279 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
PCCA-201ENST00000376279 KRTAP20-1Q3LI63 56 aa5□□□□□ -1.61
PCCA-201ENST00000376279 KRTAP5-4Q6L8H1 288 aa4.99□□□□□ -1.61
PCCA-201ENST00000376279 KRTAP4-6Q9BYQ5 205 aa4.83□□□□□ -1.64
PCCA-201ENST00000376279 MT4P47944 62 aa4.8□□□□□ -1.64
PCCA-201ENST00000376279 LCE4AQ5TA78 99 aa4.72□□□□□ -1.65
PCCA-201ENST00000376279 KRTAP20-2Q3LI61 65 aa4.69□□□□□ -1.66
PCCA-201ENST00000376279 KRTAP2-2Q9BYT5 123 aa4.66□□□□□ -1.66
PCCA-201ENST00000376279 KRTAP5-2Q701N4 177 aa4.63□□□□□ -1.67
PCCA-201ENST00000376279 LCE1DQ5T752 114 aa4.54□□□□□ -1.68
PCCA-201ENST00000376279 HMCN1Q96RW7 5635 aa4.54□□□□□ -1.68
PCCA-201ENST00000376279 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
PCCA-201ENST00000376279 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
PCCA-201ENST00000376279 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
PCCA-201ENST00000376279 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
PCCA-201ENST00000376279 LCE1BQ5T7P3 118 aa4.11□□□□□ -1.75
PCCA-201ENST00000376279 KRTAP5-10Q6L8G5 202 aa3.96□□□□□ -1.77
PCCA-201ENST00000376279 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.77
PCCA-201ENST00000376279 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
PCCA-201ENST00000376279 LCE1CQ5T751 118 aa3.93□□□□□ -1.78
PCCA-201ENST00000376279 KRTAP4-11Q9BYQ6 195 aa3.92□□□□□ -1.78
PCCA-201ENST00000376279 AHNAK2Q8IVF2 5795 aa3.92□□□□□ -1.78
PCCA-201ENST00000376279 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
PCCA-201ENST00000376279 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
PCCA-201ENST00000376279 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
PCCA-201ENST00000376279 KRTAP21-2Q3LI59 83 aa3.66□□□□□ -1.82
PCCA-201ENST00000376279 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
PCCA-201ENST00000376279 KRTAP9-9Q9BYP9 154 aa3.46□□□□□ -1.85
PCCA-201ENST00000376279 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
PCCA-201ENST00000376279 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
PCCA-201ENST00000376279 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
PCCA-201ENST00000376279 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
PCCA-201ENST00000376279 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
PCCA-201ENST00000376279 KRTAP21-1Q3LI58 79 aa3.18□□□□□ -1.9
PCCA-201ENST00000376279 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
PCCA-201ENST00000376279 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
PCCA-201ENST00000376279 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 9.1 ms