RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 FCGBPQ9Y6R7 5405 aaPredicted RBP6.63□□□□□ -1.35
TMEFF1-201ENST00000374879 MUC12Q9UKN1 5478 aa6.62□□□□□ -1.35
TMEFF1-201ENST00000374879 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
TMEFF1-201ENST00000374879 KRTAP19-6Q3LI70 58 aa6.6□□□□□ -1.35
TMEFF1-201ENST00000374879 DSTQ03001 7570 aaKnown RBP6.51□□□□□ -1.37
TMEFF1-201ENST00000374879 KRTAP4-3Q9BYR4 195 aa6.48□□□□□ -1.37
TMEFF1-201ENST00000374879 MT1GP13640 62 aa6.46□□□□□ -1.38
TMEFF1-201ENST00000374879 LCE2DQ5TA82 110 aaPredicted RBP6.37□□□□□ -1.39
TMEFF1-201ENST00000374879 CRCT1Q9UGL9 99 aa6.37□□□□□ -1.39
TMEFF1-201ENST00000374879 KRTAP19-3Q7Z4W3 81 aa6.29□□□□□ -1.4
TMEFF1-201ENST00000374879 MT1MQ8N339 61 aa6.29□□□□□ -1.4
TMEFF1-201ENST00000374879 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
TMEFF1-201ENST00000374879 MACF1Q9UPN3 7388 aaKnown RBP6.21□□□□□ -1.41
TMEFF1-201ENST00000374879 KRTAP9-2Q9BYQ4 174 aa6.17□□□□□ -1.42
TMEFF1-201ENST00000374879 LCE3BQ5TA77 95 aa6.16□□□□□ -1.42
TMEFF1-201ENST00000374879 SYNE2Q8WXH0 6885 aaKnown RBP6.15□□□□□ -1.42
TMEFF1-201ENST00000374879 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
TMEFF1-201ENST00000374879 SYNE1Q8NF91 8797 aaKnown RBP6.11□□□□□ -1.43
TMEFF1-201ENST00000374879 PRM1P04553 51 aa6.09□□□□□ -1.44
TMEFF1-201ENST00000374879 SPRR2FQ96RM1 72 aa6.09□□□□□ -1.44
TMEFF1-201ENST00000374879 MDN1Q9NU22 5596 aa6.08□□□□□ -1.44
TMEFF1-201ENST00000374879 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
TMEFF1-201ENST00000374879 KRTAP5-5Q701N2 237 aaPredicted RBP6.03□□□□□ -1.44
TMEFF1-201ENST00000374879 MT1AP04731 61 aa6□□□□□ -1.45
TMEFF1-201ENST00000374879 LCE3DQ9BYE3 92 aa5.96□□□□□ -1.45
TMEFF1-201ENST00000374879 LCE3EQ5T5B0 92 aa5.95□□□□□ -1.46
TMEFF1-201ENST00000374879 KRTAP6-3Q3LI67 103 aa5.87□□□□□ -1.47
TMEFF1-201ENST00000374879 KRTAP9-6A0A140TA67 174 aa5.84□□□□□ -1.47
TMEFF1-201ENST00000374879 KRTAP6-1Q3LI64 71 aa5.79□□□□□ -1.48
TMEFF1-201ENST00000374879 OBSCNQ5VST9 7968 aa5.75□□□□□ -1.49
TMEFF1-201ENST00000374879 LCE1AQ5T7P2 110 aa5.67□□□□□ -1.5
TMEFF1-201ENST00000374879 KRTAP6-2Q3LI66 62 aa5.66□□□□□ -1.5
TMEFF1-201ENST00000374879 KRTAP2-2Q9BYT5 123 aa5.63□□□□□ -1.51
TMEFF1-201ENST00000374879 KRTAP5-9P26371 169 aa5.59□□□□□ -1.51
TMEFF1-201ENST00000374879 SPRR2EP22531 72 aa5.51□□□□□ -1.53
TMEFF1-201ENST00000374879 SPRR2BP35325 72 aa5.51□□□□□ -1.53
TMEFF1-201ENST00000374879 SPRR2AP35326 72 aa5.51□□□□□ -1.53
TMEFF1-201ENST00000374879 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
TMEFF1-201ENST00000374879 SPRR2DP22532 72 aa5.27□□□□□ -1.57
TMEFF1-201ENST00000374879 LCE1EQ5T753 118 aa5.24□□□□□ -1.57
TMEFF1-201ENST00000374879 MT3P25713 68 aa5.07□□□□□ -1.6
TMEFF1-201ENST00000374879 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
TMEFF1-201ENST00000374879 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.04□□□□□ -1.6
TMEFF1-201ENST00000374879 KRTAP5-4Q6L8H1 288 aa4.85□□□□□ -1.63
TMEFF1-201ENST00000374879 NEBP20929 6669 aa4.79□□□□□ -1.64
TMEFF1-201ENST00000374879 KRTAP4-6Q9BYQ5 205 aa4.74□□□□□ -1.65
TMEFF1-201ENST00000374879 MT4P47944 62 aa4.69□□□□□ -1.66
TMEFF1-201ENST00000374879 HMCN1Q96RW7 5635 aa4.58□□□□□ -1.68
TMEFF1-201ENST00000374879 KRTAP20-2Q3LI61 65 aa4.58□□□□□ -1.68
TMEFF1-201ENST00000374879 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
TMEFF1-201ENST00000374879 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
TMEFF1-201ENST00000374879 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
TMEFF1-201ENST00000374879 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
TMEFF1-201ENST00000374879 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
TMEFF1-201ENST00000374879 KRTAP20-1Q3LI63 56 aa4.29□□□□□ -1.72
TMEFF1-201ENST00000374879 KRTAP5-10Q6L8G5 202 aa4.27□□□□□ -1.73
TMEFF1-201ENST00000374879 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
TMEFF1-201ENST00000374879 LCE1BQ5T7P3 118 aa4.12□□□□□ -1.75
TMEFF1-201ENST00000374879 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
TMEFF1-201ENST00000374879 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
TMEFF1-201ENST00000374879 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
TMEFF1-201ENST00000374879 KRTAP21-1Q3LI58 79 aa3.87□□□□□ -1.79
TMEFF1-201ENST00000374879 MUC19Q7Z5P9 8384 aa3.86□□□□□ -1.79
TMEFF1-201ENST00000374879 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
TMEFF1-201ENST00000374879 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
TMEFF1-201ENST00000374879 AHNAK2Q8IVF2 5795 aa3.64□□□□□ -1.83
TMEFF1-201ENST00000374879 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
TMEFF1-201ENST00000374879 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
TMEFF1-201ENST00000374879 KRTAP5-7Q6L8G8 165 aa3.53□□□□□ -1.84
TMEFF1-201ENST00000374879 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
TMEFF1-201ENST00000374879 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
TMEFF1-201ENST00000374879 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
TMEFF1-201ENST00000374879 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
TMEFF1-201ENST00000374879 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
TMEFF1-201ENST00000374879 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
TMEFF1-201ENST00000374879 AHNAKQ09666 5890 aaKnown RBP2.6□□□□□ -1.99
TMEFF1-201ENST00000374879 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms