RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 P0C880 135 aa1.88□□□□□ -2.11
PMS1-202ENST00000374826 Q5VV11 94 aa1.88□□□□□ -2.11
PMS1-202ENST00000374826 FCGBPQ9Y6R7 5405 aaPredicted RBP1.88□□□□□ -2.11
PMS1-202ENST00000374826 H7BZZ5 65 aa1.87□□□□□ -2.11
PMS1-202ENST00000374826 KRTAP19-8Q3LI54 63 aa1.87□□□□□ -2.11
PMS1-202ENST00000374826 KRTAP19-6Q3LI70 58 aa1.87□□□□□ -2.11
PMS1-202ENST00000374826 KTN1-AS1Q86SY8 53 aa1.87□□□□□ -2.11
PMS1-202ENST00000374826 CRIPTQ9P021 101 aa1.87□□□□□ -2.11
PMS1-202ENST00000374826 KMT2DO14686 5537 aa1.87□□□□□ -2.11
PMS1-202ENST00000374826 CCDC179H3BU77 68 aa1.86□□□□□ -2.11
PMS1-202ENST00000374826 COA5Q86WW8 74 aa1.86□□□□□ -2.11
PMS1-202ENST00000374826 SPTSSBQ8NFR3 76 aa1.86□□□□□ -2.11
PMS1-202ENST00000374826 M0QZ58 72 aa1.85□□□□□ -2.11
PMS1-202ENST00000374826 LUZP6Q538Z0 58 aa1.85□□□□□ -2.11
PMS1-202ENST00000374826 R4GN34 69 aa1.85□□□□□ -2.11
PMS1-202ENST00000374826 A6NN06 94 aa1.83□□□□□ -2.12
PMS1-202ENST00000374826 LINC01554Q52M75 96 aa1.83□□□□□ -2.12
PMS1-202ENST00000374826 BRK1Q8WUW1 75 aa1.82□□□□□ -2.12
PMS1-202ENST00000374826 KRTAP6-3Q3LI67 103 aa1.8□□□□□ -2.12
PMS1-202ENST00000374826 PLAC4Q8WY50 150 aa1.8□□□□□ -2.12
PMS1-202ENST00000374826 MUC12Q9UKN1 5478 aa1.79□□□□□ -2.12
PMS1-202ENST00000374826 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
PMS1-202ENST00000374826 A6NED7 52 aa1.79□□□□□ -2.12
PMS1-202ENST00000374826 ATP5EP56381 51 aaPredicted RBP1.79□□□□□ -2.12
PMS1-202ENST00000374826 KRTAP13-4Q3LI77 160 aa1.79□□□□□ -2.12
PMS1-202ENST00000374826 K7ERS5 55 aa1.78□□□□□ -2.12
PMS1-202ENST00000374826 MT1XP80297 61 aa1.78□□□□□ -2.12
PMS1-202ENST00000374826 DSTQ03001 7570 aaKnown RBP1.77□□□□□ -2.13
PMS1-202ENST00000374826 TMEM258P61165 79 aa1.77□□□□□ -2.13
PMS1-202ENST00000374826 SERP1Q9Y6X1 66 aa1.77□□□□□ -2.13
PMS1-202ENST00000374826 A0A0D9SG42 100 aa1.76□□□□□ -2.13
PMS1-202ENST00000374826 A0A1B0GU69 56 aa1.76□□□□□ -2.13
PMS1-202ENST00000374826 SPATA8Q6RVD6 105 aa1.76□□□□□ -2.13
PMS1-202ENST00000374826 PRO2289Q9P1D8 64 aa1.76□□□□□ -2.13
PMS1-202ENST00000374826 A0A1B0GU33 70 aa1.74□□□□□ -2.13
PMS1-202ENST00000374826 SPINT4Q6UDR6 99 aa1.72□□□□□ -2.13
PMS1-202ENST00000374826 PRR15LQ9BU68 103 aa1.72□□□□□ -2.13
PMS1-202ENST00000374826 LINC01558Q9Y6Z2 57 aa1.71□□□□□ -2.14
PMS1-202ENST00000374826 KRTAP12-1P59990 96 aa1.7□□□□□ -2.14
PMS1-202ENST00000374826 KRTAP8-1Q8IUC2 63 aa1.68□□□□□ -2.14
PMS1-202ENST00000374826 SPRR2FQ96RM1 72 aa1.67□□□□□ -2.14
PMS1-202ENST00000374826 KRTAP2-3P0C7H8 128 aa1.66□□□□□ -2.14
PMS1-202ENST00000374826 KRTAP2-4Q9BYR9 128 aa1.66□□□□□ -2.14
PMS1-202ENST00000374826 UQCR11O14957 56 aa1.65□□□□□ -2.15
PMS1-202ENST00000374826 ROMO1P60602 79 aa1.65□□□□□ -2.15
PMS1-202ENST00000374826 Q1T7F1 81 aa1.64□□□□□ -2.15
PMS1-202ENST00000374826 KRTAP25-1Q3LHN0 102 aa1.64□□□□□ -2.15
PMS1-202ENST00000374826 SPRR2EP22531 72 aa1.63□□□□□ -2.15
PMS1-202ENST00000374826 SPRR2BP35325 72 aa1.63□□□□□ -2.15
PMS1-202ENST00000374826 SPRR2AP35326 72 aa1.63□□□□□ -2.15
PMS1-202ENST00000374826 MIR22HGQ0VDD5 57 aa1.63□□□□□ -2.15
PMS1-202ENST00000374826 MUC5ACP98088 5654 aa1.62□□□□□ -2.15
PMS1-202ENST00000374826 C10orf95Q9H7T3 257 aa1.62□□□□□ -2.15
PMS1-202ENST00000374826 MDN1Q9NU22 5596 aa1.61□□□□□ -2.15
PMS1-202ENST00000374826 KRTAP2-1Q9BYU5 128 aa1.6□□□□□ -2.15
PMS1-202ENST00000374826 TNP1P09430 55 aa1.59□□□□□ -2.15
PMS1-202ENST00000374826 SPRR2DP22532 72 aa1.58□□□□□ -2.16
PMS1-202ENST00000374826 KRTAP19-7Q3SYF9 63 aa1.58□□□□□ -2.16
PMS1-202ENST00000374826 MT1EP04732 61 aa1.57□□□□□ -2.16
PMS1-202ENST00000374826 KRTAP19-5Q3LI72 72 aa1.57□□□□□ -2.16
PMS1-202ENST00000374826 KRTAP5-10Q6L8G5 202 aa1.57□□□□□ -2.16
PMS1-202ENST00000374826 KRTAP19-3Q7Z4W3 81 aa1.53□□□□□ -2.16
PMS1-202ENST00000374826 CDC42SE1Q9NRR8 79 aa1.53□□□□□ -2.16
PMS1-202ENST00000374826 MT1LQ93083 61 aa1.52□□□□□ -2.17
PMS1-202ENST00000374826 MT1MQ8N339 61 aa1.5□□□□□ -2.17
PMS1-202ENST00000374826 MT1GP13640 62 aa1.49□□□□□ -2.17
PMS1-202ENST00000374826 MT4P47944 62 aa1.39□□□□□ -2.19
PMS1-202ENST00000374826 SYNE1Q8NF91 8797 aaKnown RBP1.35□□□□□ -2.19
PMS1-202ENST00000374826 INE1O15225 51 aa1.32□□□□□ -2.2
PMS1-202ENST00000374826 MT1AP04731 61 aa1.29□□□□□ -2.2
PMS1-202ENST00000374826 KRTAP20-2Q3LI61 65 aa1.29□□□□□ -2.2
PMS1-202ENST00000374826 KRTAP6-1Q3LI64 71 aa1.28□□□□□ -2.2
PMS1-202ENST00000374826 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
PMS1-202ENST00000374826 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
PMS1-202ENST00000374826 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
PMS1-202ENST00000374826 PRM1P04553 51 aa0.79□□□□□ -2.28
PMS1-202ENST00000374826 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 8.2 ms