RNA–Protein interactions for RNA: ENST00000374688.5

TMEM38B-201, Transcript of transmembrane protein 38B, humanhuman

TSL 2 BASIC

Gene TMEM38B, Length 3,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-201ENST00000374688 KRTAP12-4P60329 112 aa1.46□□□□□ -2.18
TMEM38B-201ENST00000374688 EPPK1P58107 5090 aaKnown RBP1.44□□□□□ -2.18
TMEM38B-201ENST00000374688 KRTAP8-1Q8IUC2 63 aa1.43□□□□□ -2.18
TMEM38B-201ENST00000374688 KRTAP12-3P60328 96 aa1.43□□□□□ -2.18
TMEM38B-201ENST00000374688 J3QKU1 62 aa1.42□□□□□ -2.18
TMEM38B-201ENST00000374688 HMCN2Q8NDA2 5059 aa1.42□□□□□ -2.18
TMEM38B-201ENST00000374688 KRTAP10-7P60409 375 aaPredicted RBP1.41□□□□□ -2.18
TMEM38B-201ENST00000374688 UBR4Q5T4S7 5183 aa1.39□□□□□ -2.19
TMEM38B-201ENST00000374688 LCE3EQ5T5B0 92 aa1.39□□□□□ -2.19
TMEM38B-201ENST00000374688 KRTAP10-4P60372 401 aaPredicted RBP1.39□□□□□ -2.19
TMEM38B-201ENST00000374688 FAT4Q6V0I7 4981 aa1.38□□□□□ -2.19
TMEM38B-201ENST00000374688 RNF213Q63HN8 5207 aa1.36□□□□□ -2.19
TMEM38B-201ENST00000374688 KRTAP2-3P0C7H8 128 aa1.36□□□□□ -2.19
TMEM38B-201ENST00000374688 KRTAP2-4Q9BYR9 128 aa1.36□□□□□ -2.19
TMEM38B-201ENST00000374688 KRTAP2-1Q9BYU5 128 aa1.36□□□□□ -2.19
TMEM38B-201ENST00000374688 KRTAP4-4Q9BYR3 166 aa1.34□□□□□ -2.19
TMEM38B-201ENST00000374688 LCE3DQ9BYE3 92 aa1.33□□□□□ -2.2
TMEM38B-201ENST00000374688 AHNAKQ09666 5890 aaKnown RBP1.3□□□□□ -2.2
TMEM38B-201ENST00000374688 KRTAP5-1Q6L8H4 278 aa1.29□□□□□ -2.2
TMEM38B-201ENST00000374688 KRTAP5-5Q701N2 237 aaPredicted RBP1.28□□□□□ -2.21
TMEM38B-201ENST00000374688 SSPOA2VEC9 5147 aa1.26□□□□□ -2.21
TMEM38B-201ENST00000374688 SPRR2GQ9BYE4 73 aa1.25□□□□□ -2.21
TMEM38B-201ENST00000374688 PRM1P04553 51 aa1.24□□□□□ -2.21
TMEM38B-201ENST00000374688 MUC2Q02817 5179 aa1.24□□□□□ -2.21
TMEM38B-201ENST00000374688 KRTAP19-5Q3LI72 72 aa1.22□□□□□ -2.21
TMEM38B-201ENST00000374688 SYNE1Q8NF91 8797 aaKnown RBP1.19□□□□□ -2.22
TMEM38B-201ENST00000374688 KRTAP19-2Q3LHN2 52 aa1.19□□□□□ -2.22
TMEM38B-201ENST00000374688 KRTAP4-1Q9BYQ7 146 aa1.19□□□□□ -2.22
TMEM38B-201ENST00000374688 MT1HL1P0DM35 61 aa1.18□□□□□ -2.22
TMEM38B-201ENST00000374688 MT1XP80297 61 aa1.17□□□□□ -2.22
TMEM38B-201ENST00000374688 NEBP20929 6669 aa1.13□□□□□ -2.23
TMEM38B-201ENST00000374688 LCE1CQ5T751 118 aa1.13□□□□□ -2.23
TMEM38B-201ENST00000374688 LCE1BQ5T7P3 118 aa1.13□□□□□ -2.23
TMEM38B-201ENST00000374688 CRCT1Q9UGL9 99 aa1.13□□□□□ -2.23
TMEM38B-201ENST00000374688 OBSCNQ5VST9 7968 aa1.13□□□□□ -2.23
TMEM38B-201ENST00000374688 KRTAP19-8Q3LI54 63 aa1.12□□□□□ -2.23
TMEM38B-201ENST00000374688 MT1BP07438 61 aa1.09□□□□□ -2.24
TMEM38B-201ENST00000374688 KRTAP4-3Q9BYR4 195 aa1.09□□□□□ -2.24
TMEM38B-201ENST00000374688 AHNAK2Q8IVF2 5795 aa1.08□□□□□ -2.24
TMEM38B-201ENST00000374688 USH2AO75445 5202 aa1.08□□□□□ -2.24
TMEM38B-201ENST00000374688 MT1AP04731 61 aa1.06□□□□□ -2.24
TMEM38B-201ENST00000374688 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
TMEM38B-201ENST00000374688 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
TMEM38B-201ENST00000374688 MT1FP04733 61 aa1.06□□□□□ -2.24
TMEM38B-201ENST00000374688 MT1LQ93083 61 aa1.06□□□□□ -2.24
TMEM38B-201ENST00000374688 MT2AP02795 61 aa1.05□□□□□ -2.24
TMEM38B-201ENST00000374688 MT1GP13640 62 aa1.05□□□□□ -2.24
TMEM38B-201ENST00000374688 MT1EP04732 61 aa1.04□□□□□ -2.24
TMEM38B-201ENST00000374688 KRTAP19-7Q3SYF9 63 aa1.03□□□□□ -2.25
TMEM38B-201ENST00000374688 KMT2DO14686 5537 aa1.03□□□□□ -2.25
TMEM38B-201ENST00000374688 SPRR2FQ96RM1 72 aa0.99□□□□□ -2.25
TMEM38B-201ENST00000374688 KRTAP19-3Q7Z4W3 81 aa0.98□□□□□ -2.25
TMEM38B-201ENST00000374688 SPRR2DP22532 72 aa0.96□□□□□ -2.26
TMEM38B-201ENST00000374688 MT1HP80294 61 aa0.96□□□□□ -2.26
TMEM38B-201ENST00000374688 KRTAP5-7Q6L8G8 165 aa0.96□□□□□ -2.26
TMEM38B-201ENST00000374688 SPRR2AP35326 72 aa0.95□□□□□ -2.26
TMEM38B-201ENST00000374688 SPRR2BP35325 72 aa0.93□□□□□ -2.26
TMEM38B-201ENST00000374688 KRTAP20-1Q3LI63 56 aa0.93□□□□□ -2.26
TMEM38B-201ENST00000374688 SPRR2EP22531 72 aa0.92□□□□□ -2.26
TMEM38B-201ENST00000374688 MT1MQ8N339 61 aa0.91□□□□□ -2.26
TMEM38B-201ENST00000374688 KRTAP6-1Q3LI64 71 aa0.89□□□□□ -2.27
TMEM38B-201ENST00000374688 FCGBPQ9Y6R7 5405 aaPredicted RBP0.88□□□□□ -2.27
TMEM38B-201ENST00000374688 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
TMEM38B-201ENST00000374688 DSTQ03001 7570 aaKnown RBP0.85□□□□□ -2.27
TMEM38B-201ENST00000374688 MUC5ACP98088 5654 aa0.85□□□□□ -2.27
TMEM38B-201ENST00000374688 SYNE2Q8WXH0 6885 aaKnown RBP0.83□□□□□ -2.28
TMEM38B-201ENST00000374688 MDN1Q9NU22 5596 aa0.8□□□□□ -2.28
TMEM38B-201ENST00000374688 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
TMEM38B-201ENST00000374688 MUC12Q9UKN1 5478 aa0.78□□□□□ -2.28
TMEM38B-201ENST00000374688 MACF1Q9UPN3 7388 aaKnown RBP0.77□□□□□ -2.29
TMEM38B-201ENST00000374688 KRTAP21-2Q3LI59 83 aa0.76□□□□□ -2.29
TMEM38B-201ENST00000374688 KRTAP19-6Q3LI70 58 aa0.74□□□□□ -2.29
TMEM38B-201ENST00000374688 FSIP2Q5CZC0 6907 aa0.7□□□□□ -2.3
TMEM38B-201ENST00000374688 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
TMEM38B-201ENST00000374688 MT4P47944 62 aa0.47□□□□□ -2.33
TMEM38B-201ENST00000374688 KRTAP20-2Q3LI61 65 aa0.45□□□□□ -2.34
TMEM38B-201ENST00000374688 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 68.6 ms