RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 PKHD1P08F94 4074 aa5.39□□□□□ -1.55
COL16A1-203ENST00000373672 KRTAP4-3Q9BYR4 195 aa5.38□□□□□ -1.55
COL16A1-203ENST00000373672 LCE1BQ5T7P3 118 aa5.31□□□□□ -1.56
COL16A1-203ENST00000373672 LCE1DQ5T752 114 aa5.29□□□□□ -1.56
COL16A1-203ENST00000373672 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
COL16A1-203ENST00000373672 MT1AP04731 61 aa5.26□□□□□ -1.57
COL16A1-203ENST00000373672 EPPK1P58107 5090 aaKnown RBP5.24□□□□□ -1.57
COL16A1-203ENST00000373672 KRTAP19-7Q3SYF9 63 aa5.24□□□□□ -1.57
COL16A1-203ENST00000373672 KRTAP2-3P0C7H8 128 aa5.14□□□□□ -1.59
COL16A1-203ENST00000373672 KRTAP2-4Q9BYR9 128 aa5.14□□□□□ -1.59
COL16A1-203ENST00000373672 KRTAP2-1Q9BYU5 128 aa5.14□□□□□ -1.59
COL16A1-203ENST00000373672 ABCA13Q86UQ4 5058 aa5.14□□□□□ -1.59
COL16A1-203ENST00000373672 LCE2AQ5TA79 106 aaPredicted RBP5.1□□□□□ -1.59
COL16A1-203ENST00000373672 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
COL16A1-203ENST00000373672 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
COL16A1-203ENST00000373672 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
COL16A1-203ENST00000373672 KRTAP9-6A0A140TA67 174 aa4.97□□□□□ -1.61
COL16A1-203ENST00000373672 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
COL16A1-203ENST00000373672 HMCN2Q8NDA2 5059 aa4.92□□□□□ -1.62
COL16A1-203ENST00000373672 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
COL16A1-203ENST00000373672 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.62
COL16A1-203ENST00000373672 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
COL16A1-203ENST00000373672 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
COL16A1-203ENST00000373672 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.63
COL16A1-203ENST00000373672 KRTAP6-3Q3LI67 103 aa4.81□□□□□ -1.64
COL16A1-203ENST00000373672 SYNE1Q8NF91 8797 aaKnown RBP4.81□□□□□ -1.64
COL16A1-203ENST00000373672 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
COL16A1-203ENST00000373672 UBR4Q5T4S7 5183 aa4.78□□□□□ -1.64
COL16A1-203ENST00000373672 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
COL16A1-203ENST00000373672 KRTAP9-7A8MTY7 169 aa4.72□□□□□ -1.65
COL16A1-203ENST00000373672 SYNE2Q8WXH0 6885 aaKnown RBP4.7□□□□□ -1.66
COL16A1-203ENST00000373672 MUC2Q02817 5179 aa4.65□□□□□ -1.66
COL16A1-203ENST00000373672 FSIP2Q5CZC0 6907 aa4.64□□□□□ -1.67
COL16A1-203ENST00000373672 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.56□□□□□ -1.68
COL16A1-203ENST00000373672 KRTAP2-2Q9BYT5 123 aa4.56□□□□□ -1.68
COL16A1-203ENST00000373672 OBSCNQ5VST9 7968 aa4.54□□□□□ -1.68
COL16A1-203ENST00000373672 LCE1CQ5T751 118 aa4.54□□□□□ -1.68
COL16A1-203ENST00000373672 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
COL16A1-203ENST00000373672 LCE1FQ5T754 118 aa4.54□□□□□ -1.68
COL16A1-203ENST00000373672 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.74
COL16A1-203ENST00000373672 USH2AO75445 5202 aa4.14□□□□□ -1.75
COL16A1-203ENST00000373672 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
COL16A1-203ENST00000373672 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
COL16A1-203ENST00000373672 FCGBPQ9Y6R7 5405 aaPredicted RBP4.01□□□□□ -1.77
COL16A1-203ENST00000373672 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
COL16A1-203ENST00000373672 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
COL16A1-203ENST00000373672 NEBP20929 6669 aa3.91□□□□□ -1.78
COL16A1-203ENST00000373672 SSPOA2VEC9 5147 aa3.83□□□□□ -1.8
COL16A1-203ENST00000373672 KMT2DO14686 5537 aa3.83□□□□□ -1.8
COL16A1-203ENST00000373672 DSTQ03001 7570 aaKnown RBP3.82□□□□□ -1.8
COL16A1-203ENST00000373672 MACF1Q9UPN3 7388 aaKnown RBP3.79□□□□□ -1.8
COL16A1-203ENST00000373672 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
COL16A1-203ENST00000373672 KRTAP5-4Q6L8H1 288 aa3.65□□□□□ -1.82
COL16A1-203ENST00000373672 KRTAP5-5Q701N2 237 aaPredicted RBP3.6□□□□□ -1.83
COL16A1-203ENST00000373672 KRTAP4-12Q9BQ66 201 aa3.58□□□□□ -1.84
COL16A1-203ENST00000373672 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
COL16A1-203ENST00000373672 MUC12Q9UKN1 5478 aa3.53□□□□□ -1.84
COL16A1-203ENST00000373672 MUC19Q7Z5P9 8384 aa3.52□□□□□ -1.85
COL16A1-203ENST00000373672 MDN1Q9NU22 5596 aa3.46□□□□□ -1.86
COL16A1-203ENST00000373672 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.88
COL16A1-203ENST00000373672 KRTAP5-3Q6L8H2 238 aa3.17□□□□□ -1.9
COL16A1-203ENST00000373672 MUC5ACP98088 5654 aa3□□□□□ -1.93
COL16A1-203ENST00000373672 KRTAP5-10Q6L8G5 202 aa2.88□□□□□ -1.95
COL16A1-203ENST00000373672 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
COL16A1-203ENST00000373672 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.96
COL16A1-203ENST00000373672 HMCN1Q96RW7 5635 aa2.8□□□□□ -1.96
COL16A1-203ENST00000373672 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
COL16A1-203ENST00000373672 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
COL16A1-203ENST00000373672 MUC5BQ9HC84 5762 aaPredicted RBP2.64□□□□□ -1.99
COL16A1-203ENST00000373672 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
COL16A1-203ENST00000373672 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
COL16A1-203ENST00000373672 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
COL16A1-203ENST00000373672 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
COL16A1-203ENST00000373672 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
COL16A1-203ENST00000373672 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
COL16A1-203ENST00000373672 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
COL16A1-203ENST00000373672 MUC16Q8WXI7 14507 aa1.55□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 92.9 ms