RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 LPAP08519 4548 aa2.2□□□□□ -2.06
CSMD2-206ENST00000373388 SYNE2Q8WXH0 6885 aaKnown RBP2.2□□□□□ -2.06
CSMD2-206ENST00000373388 KRTAP2-3P0C7H8 128 aa2.17□□□□□ -2.06
CSMD2-206ENST00000373388 KRTAP2-4Q9BYR9 128 aa2.17□□□□□ -2.06
CSMD2-206ENST00000373388 KRTAP2-1Q9BYU5 128 aa2.17□□□□□ -2.06
CSMD2-206ENST00000373388 KRTAP9-8Q9BYQ0 159 aa2.17□□□□□ -2.06
CSMD2-206ENST00000373388 LCE2CQ5TA81 110 aa2.15□□□□□ -2.07
CSMD2-206ENST00000373388 MT1EP04732 61 aa2.14□□□□□ -2.07
CSMD2-206ENST00000373388 FSIP2Q5CZC0 6907 aa2.14□□□□□ -2.07
CSMD2-206ENST00000373388 KRTAP19-3Q7Z4W3 81 aa2.13□□□□□ -2.07
CSMD2-206ENST00000373388 KRTAP9-3Q9BYQ3 159 aa2.13□□□□□ -2.07
CSMD2-206ENST00000373388 LOC100996750A0A140TA64 210 aa2.12□□□□□ -2.07
CSMD2-206ENST00000373388 MACF1Q9UPN3 7388 aaKnown RBP2.12□□□□□ -2.07
CSMD2-206ENST00000373388 LCE2DQ5TA82 110 aaPredicted RBP2.11□□□□□ -2.07
CSMD2-206ENST00000373388 MT4P47944 62 aa2.11□□□□□ -2.07
CSMD2-206ENST00000373388 NEBP20929 6669 aa2.09□□□□□ -2.08
CSMD2-206ENST00000373388 MT1AP04731 61 aa2.09□□□□□ -2.08
CSMD2-206ENST00000373388 USH2AO75445 5202 aa2.07□□□□□ -2.08
CSMD2-206ENST00000373388 KRTAP4-3Q9BYR4 195 aa2.07□□□□□ -2.08
CSMD2-206ENST00000373388 SYNE1Q8NF91 8797 aaKnown RBP2.04□□□□□ -2.08
CSMD2-206ENST00000373388 FCGBPQ9Y6R7 5405 aaPredicted RBP2.03□□□□□ -2.08
CSMD2-206ENST00000373388 KRTAP4-9Q9BYQ8 210 aa2.02□□□□□ -2.09
CSMD2-206ENST00000373388 MT1MQ8N339 61 aa2.02□□□□□ -2.09
CSMD2-206ENST00000373388 MUC2Q02817 5179 aa2.01□□□□□ -2.09
CSMD2-206ENST00000373388 KRTAP19-2Q3LHN2 52 aa2.01□□□□□ -2.09
CSMD2-206ENST00000373388 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
CSMD2-206ENST00000373388 LCE1DQ5T752 114 aa1.99□□□□□ -2.09
CSMD2-206ENST00000373388 KRTAP9-2Q9BYQ4 174 aa1.97□□□□□ -2.09
CSMD2-206ENST00000373388 AHNAK2Q8IVF2 5795 aa1.97□□□□□ -2.09
CSMD2-206ENST00000373388 OBSCNQ5VST9 7968 aa1.95□□□□□ -2.1
CSMD2-206ENST00000373388 KRTAP6-2Q3LI66 62 aa1.93□□□□□ -2.1
CSMD2-206ENST00000373388 LCE5AQ5TCM9 118 aa1.89□□□□□ -2.11
CSMD2-206ENST00000373388 KRTAP20-1Q3LI63 56 aa1.88□□□□□ -2.11
CSMD2-206ENST00000373388 KRTAP9-6A0A140TA67 174 aa1.88□□□□□ -2.11
CSMD2-206ENST00000373388 KRTAP2-2Q9BYT5 123 aa1.87□□□□□ -2.11
CSMD2-206ENST00000373388 LCE1AQ5T7P2 110 aa1.87□□□□□ -2.11
CSMD2-206ENST00000373388 KRTAP19-7Q3SYF9 63 aa1.86□□□□□ -2.11
CSMD2-206ENST00000373388 KRTAP19-6Q3LI70 58 aa1.85□□□□□ -2.11
CSMD2-206ENST00000373388 HMCN1Q96RW7 5635 aa1.83□□□□□ -2.12
CSMD2-206ENST00000373388 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
CSMD2-206ENST00000373388 LCE1EQ5T753 118 aa1.83□□□□□ -2.12
CSMD2-206ENST00000373388 LCE1FQ5T754 118 aa1.83□□□□□ -2.12
CSMD2-206ENST00000373388 KRTAP9-6A8MVA2 160 aa1.82□□□□□ -2.12
CSMD2-206ENST00000373388 KRTAP6-1Q3LI64 71 aa1.81□□□□□ -2.12
CSMD2-206ENST00000373388 KRTAP9-7A8MTY7 169 aa1.81□□□□□ -2.12
CSMD2-206ENST00000373388 SSPOA2VEC9 5147 aa1.8□□□□□ -2.12
CSMD2-206ENST00000373388 LCE4AQ5TA78 99 aa1.73□□□□□ -2.13
CSMD2-206ENST00000373388 MUC5BQ9HC84 5762 aaPredicted RBP1.73□□□□□ -2.13
CSMD2-206ENST00000373388 LCE2AQ5TA79 106 aaPredicted RBP1.72□□□□□ -2.13
CSMD2-206ENST00000373388 KRTAP9-4Q9BYQ2 154 aa1.72□□□□□ -2.13
CSMD2-206ENST00000373388 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
CSMD2-206ENST00000373388 AHNAKQ09666 5890 aaKnown RBP1.66□□□□□ -2.14
CSMD2-206ENST00000373388 KRTAP6-3Q3LI67 103 aa1.65□□□□□ -2.15
CSMD2-206ENST00000373388 KRTAP9-9Q9BYP9 154 aa1.63□□□□□ -2.15
CSMD2-206ENST00000373388 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.62□□□□□ -2.15
CSMD2-206ENST00000373388 KRTAP4-11Q9BYQ6 195 aa1.58□□□□□ -2.16
CSMD2-206ENST00000373388 KRTAP20-2Q3LI61 65 aa1.48□□□□□ -2.17
CSMD2-206ENST00000373388 KRTAP4-4Q9BYR3 166 aa1.48□□□□□ -2.17
CSMD2-206ENST00000373388 KRTAP4-6Q9BYQ5 205 aa1.47□□□□□ -2.17
CSMD2-206ENST00000373388 MUC19Q7Z5P9 8384 aa1.46□□□□□ -2.18
CSMD2-206ENST00000373388 KRTAP5-9P26371 169 aa1.44□□□□□ -2.18
CSMD2-206ENST00000373388 KRTAP5-5Q701N2 237 aaPredicted RBP1.42□□□□□ -2.18
CSMD2-206ENST00000373388 KRTAP4-12Q9BQ66 201 aa1.41□□□□□ -2.18
CSMD2-206ENST00000373388 KRTAP4-2Q9BYR5 136 aa1.41□□□□□ -2.18
CSMD2-206ENST00000373388 KRTAP5-4Q6L8H1 288 aa1.27□□□□□ -2.21
CSMD2-206ENST00000373388 KRTAP5-3Q6L8H2 238 aa1.13□□□□□ -2.23
CSMD2-206ENST00000373388 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
CSMD2-206ENST00000373388 PHGR1C9JFL3 82 aa1.1□□□□□ -2.23
CSMD2-206ENST00000373388 KRTAP5-2Q701N4 177 aa1.01□□□□□ -2.25
CSMD2-206ENST00000373388 KRTAP5-8O75690 187 aa1.01□□□□□ -2.25
CSMD2-206ENST00000373388 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
CSMD2-206ENST00000373388 KRTAP5-11Q6L8G4 156 aa0.98□□□□□ -2.25
CSMD2-206ENST00000373388 KRTAP5-1Q6L8H4 278 aa0.93□□□□□ -2.26
CSMD2-206ENST00000373388 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.92□□□□□ -2.26
CSMD2-206ENST00000373388 KRTAP21-2Q3LI59 83 aa0.85□□□□□ -2.27
CSMD2-206ENST00000373388 KRTAP5-7Q6L8G8 165 aa0.73□□□□□ -2.29
CSMD2-206ENST00000373388 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 117.3 ms