RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 MIR22HGQ0VDD5 57 aa3.95□□□□□ -1.78
ITM2A-201ENST00000373298 KMT2DO14686 5537 aa3.94□□□□□ -1.78
ITM2A-201ENST00000373298 KRTAP12-2P59991 146 aa3.9□□□□□ -1.79
ITM2A-201ENST00000373298 KRTAP12-1P59990 96 aa3.89□□□□□ -1.79
ITM2A-201ENST00000373298 SPINT4Q6UDR6 99 aa3.88□□□□□ -1.79
ITM2A-201ENST00000373298 PRO2289Q9P1D8 64 aa3.87□□□□□ -1.79
ITM2A-201ENST00000373298 CAMK2N1Q7Z7J9 78 aa3.83□□□□□ -1.8
ITM2A-201ENST00000373298 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
ITM2A-201ENST00000373298 MT3P25713 68 aa3.78□□□□□ -1.8
ITM2A-201ENST00000373298 KRTAP6-3Q3LI67 103 aa3.78□□□□□ -1.8
ITM2A-201ENST00000373298 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
ITM2A-201ENST00000373298 K7ERS5 55 aa3.77□□□□□ -1.81
ITM2A-201ENST00000373298 KRTAP10-12P60413 245 aa3.77□□□□□ -1.81
ITM2A-201ENST00000373298 NEBP20929 6669 aa3.77□□□□□ -1.81
ITM2A-201ENST00000373298 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
ITM2A-201ENST00000373298 C10orf95Q9H7T3 257 aa3.73□□□□□ -1.81
ITM2A-201ENST00000373298 MDN1Q9NU22 5596 aa3.73□□□□□ -1.81
ITM2A-201ENST00000373298 KRTAP20-1Q3LI63 56 aa3.71□□□□□ -1.82
ITM2A-201ENST00000373298 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
ITM2A-201ENST00000373298 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
ITM2A-201ENST00000373298 SPRR2FQ96RM1 72 aa3.66□□□□□ -1.82
ITM2A-201ENST00000373298 ROMO1P60602 79 aa3.63□□□□□ -1.83
ITM2A-201ENST00000373298 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.84
ITM2A-201ENST00000373298 TNP1P09430 55 aa3.58□□□□□ -1.84
ITM2A-201ENST00000373298 LCE3AQ5TA76 89 aa3.57□□□□□ -1.84
ITM2A-201ENST00000373298 KRTAP19-5Q3LI72 72 aa3.55□□□□□ -1.84
ITM2A-201ENST00000373298 SPRR2EP22531 72 aa3.54□□□□□ -1.84
ITM2A-201ENST00000373298 SPRR2BP35325 72 aa3.54□□□□□ -1.84
ITM2A-201ENST00000373298 SPRR2AP35326 72 aa3.54□□□□□ -1.84
ITM2A-201ENST00000373298 MT1EP04732 61 aa3.52□□□□□ -1.85
ITM2A-201ENST00000373298 DSTQ03001 7570 aaKnown RBP3.5□□□□□ -1.85
ITM2A-201ENST00000373298 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
ITM2A-201ENST00000373298 KRTAP2-3P0C7H8 128 aa3.48□□□□□ -1.85
ITM2A-201ENST00000373298 KRTAP2-4Q9BYR9 128 aa3.48□□□□□ -1.85
ITM2A-201ENST00000373298 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
ITM2A-201ENST00000373298 SPRR2DP22532 72 aa3.41□□□□□ -1.86
ITM2A-201ENST00000373298 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
ITM2A-201ENST00000373298 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
ITM2A-201ENST00000373298 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
ITM2A-201ENST00000373298 MT1LQ93083 61 aa3.41□□□□□ -1.86
ITM2A-201ENST00000373298 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
ITM2A-201ENST00000373298 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
ITM2A-201ENST00000373298 LUZP6Q538Z0 58 aa3.37□□□□□ -1.87
ITM2A-201ENST00000373298 KRTAP2-1Q9BYU5 128 aa3.36□□□□□ -1.87
ITM2A-201ENST00000373298 MT1GP13640 62 aa3.33□□□□□ -1.88
ITM2A-201ENST00000373298 MT1MQ8N339 61 aa3.33□□□□□ -1.88
ITM2A-201ENST00000373298 PP632Q6XCG6 107 aa3.27□□□□□ -1.89
ITM2A-201ENST00000373298 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
ITM2A-201ENST00000373298 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
ITM2A-201ENST00000373298 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
ITM2A-201ENST00000373298 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
ITM2A-201ENST00000373298 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
ITM2A-201ENST00000373298 MT4P47944 62 aa3.01□□□□□ -1.93
ITM2A-201ENST00000373298 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
ITM2A-201ENST00000373298 SPRR5A0A1B0GTR4 108 aa3□□□□□ -1.93
ITM2A-201ENST00000373298 KRTAP5-8O75690 187 aa2.97□□□□□ -1.93
ITM2A-201ENST00000373298 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
ITM2A-201ENST00000373298 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
ITM2A-201ENST00000373298 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.95
ITM2A-201ENST00000373298 KRTAP5-7Q6L8G8 165 aa2.88□□□□□ -1.95
ITM2A-201ENST00000373298 MT1AP04731 61 aa2.86□□□□□ -1.95
ITM2A-201ENST00000373298 KRTAP20-2Q3LI61 65 aa2.86□□□□□ -1.95
ITM2A-201ENST00000373298 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
ITM2A-201ENST00000373298 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
ITM2A-201ENST00000373298 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
ITM2A-201ENST00000373298 INE1O15225 51 aa2.75□□□□□ -1.97
ITM2A-201ENST00000373298 KRTAP6-2Q3LI66 62 aa2.71□□□□□ -1.97
ITM2A-201ENST00000373298 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
ITM2A-201ENST00000373298 MUC5ACP98088 5654 aa2.57□□□□□ -2
ITM2A-201ENST00000373298 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
ITM2A-201ENST00000373298 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
ITM2A-201ENST00000373298 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
ITM2A-201ENST00000373298 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
ITM2A-201ENST00000373298 PRM1P04553 51 aa1.9□□□□□ -2.11
ITM2A-201ENST00000373298 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
ITM2A-201ENST00000373298 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
ITM2A-201ENST00000373298 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 163 ms