RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
TSPAN6-201ENST00000373020 KRTAP4-12Q9BQ66 201 aa4.48□□□□□ -1.69
TSPAN6-201ENST00000373020 INE1O15225 51 aa4.44□□□□□ -1.7
TSPAN6-201ENST00000373020 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
TSPAN6-201ENST00000373020 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
TSPAN6-201ENST00000373020 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
TSPAN6-201ENST00000373020 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
TSPAN6-201ENST00000373020 MT1EP04732 61 aa4.4□□□□□ -1.71
TSPAN6-201ENST00000373020 KRTAP19-6Q3LI70 58 aa4.4□□□□□ -1.71
TSPAN6-201ENST00000373020 MT1LQ93083 61 aa4.38□□□□□ -1.71
TSPAN6-201ENST00000373020 KRTAP2-3P0C7H8 128 aa4.29□□□□□ -1.72
TSPAN6-201ENST00000373020 KRTAP2-4Q9BYR9 128 aa4.29□□□□□ -1.72
TSPAN6-201ENST00000373020 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
TSPAN6-201ENST00000373020 FSIP2Q5CZC0 6907 aa4.12□□□□□ -1.75
TSPAN6-201ENST00000373020 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
TSPAN6-201ENST00000373020 KRTAP19-3Q7Z4W3 81 aa4.11□□□□□ -1.75
TSPAN6-201ENST00000373020 MT1MQ8N339 61 aa4.11□□□□□ -1.75
TSPAN6-201ENST00000373020 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
TSPAN6-201ENST00000373020 MT1GP13640 62 aa4.09□□□□□ -1.75
TSPAN6-201ENST00000373020 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.75
TSPAN6-201ENST00000373020 MUC12Q9UKN1 5478 aa4.06□□□□□ -1.76
TSPAN6-201ENST00000373020 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
TSPAN6-201ENST00000373020 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
TSPAN6-201ENST00000373020 CRCT1Q9UGL9 99 aa3.87□□□□□ -1.79
TSPAN6-201ENST00000373020 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.8
TSPAN6-201ENST00000373020 KRTAP9-7A8MTY7 169 aa3.78□□□□□ -1.8
TSPAN6-201ENST00000373020 KRTAP5-9P26371 169 aa3.76□□□□□ -1.81
TSPAN6-201ENST00000373020 DSTQ03001 7570 aaKnown RBP3.75□□□□□ -1.81
TSPAN6-201ENST00000373020 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
TSPAN6-201ENST00000373020 MT1AP04731 61 aa3.7□□□□□ -1.82
TSPAN6-201ENST00000373020 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
TSPAN6-201ENST00000373020 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
TSPAN6-201ENST00000373020 MDN1Q9NU22 5596 aa3.7□□□□□ -1.82
TSPAN6-201ENST00000373020 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
TSPAN6-201ENST00000373020 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
TSPAN6-201ENST00000373020 SPRR2EP22531 72 aa3.6□□□□□ -1.83
TSPAN6-201ENST00000373020 SPRR2BP35325 72 aa3.6□□□□□ -1.83
TSPAN6-201ENST00000373020 SPRR2AP35326 72 aa3.6□□□□□ -1.83
TSPAN6-201ENST00000373020 SYNE1Q8NF91 8797 aaKnown RBP3.59□□□□□ -1.83
TSPAN6-201ENST00000373020 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
TSPAN6-201ENST00000373020 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
TSPAN6-201ENST00000373020 HMCN1Q96RW7 5635 aa3.47□□□□□ -1.85
TSPAN6-201ENST00000373020 SPRR2DP22532 72 aa3.45□□□□□ -1.86
TSPAN6-201ENST00000373020 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
TSPAN6-201ENST00000373020 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
TSPAN6-201ENST00000373020 KRTAP6-2Q3LI66 62 aa3.31□□□□□ -1.88
TSPAN6-201ENST00000373020 MT3P25713 68 aa3.3□□□□□ -1.88
TSPAN6-201ENST00000373020 PRM1P04553 51 aa3.28□□□□□ -1.88
TSPAN6-201ENST00000373020 LCE4AQ5TA78 99 aa3.27□□□□□ -1.89
TSPAN6-201ENST00000373020 KRTAP5-4Q6L8H1 288 aa3.27□□□□□ -1.89
TSPAN6-201ENST00000373020 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
TSPAN6-201ENST00000373020 NEBP20929 6669 aa3.25□□□□□ -1.89
TSPAN6-201ENST00000373020 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
TSPAN6-201ENST00000373020 OBSCNQ5VST9 7968 aa3.08□□□□□ -1.92
TSPAN6-201ENST00000373020 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
TSPAN6-201ENST00000373020 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.93
TSPAN6-201ENST00000373020 MT4P47944 62 aa3□□□□□ -1.93
TSPAN6-201ENST00000373020 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
TSPAN6-201ENST00000373020 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
TSPAN6-201ENST00000373020 LCE1EQ5T753 118 aa2.75□□□□□ -1.97
TSPAN6-201ENST00000373020 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
TSPAN6-201ENST00000373020 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
TSPAN6-201ENST00000373020 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
TSPAN6-201ENST00000373020 KRTAP5-10Q6L8G5 202 aa2.64□□□□□ -1.99
TSPAN6-201ENST00000373020 LCE1BQ5T7P3 118 aa2.6□□□□□ -1.99
TSPAN6-201ENST00000373020 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
TSPAN6-201ENST00000373020 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
TSPAN6-201ENST00000373020 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
TSPAN6-201ENST00000373020 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
TSPAN6-201ENST00000373020 KRTAP21-2Q3LI59 83 aa2.42□□□□□ -2.02
TSPAN6-201ENST00000373020 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
TSPAN6-201ENST00000373020 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
TSPAN6-201ENST00000373020 KRTAP21-1Q3LI58 79 aa2.1□□□□□ -2.07
TSPAN6-201ENST00000373020 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
TSPAN6-201ENST00000373020 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
TSPAN6-201ENST00000373020 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
TSPAN6-201ENST00000373020 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 9.8 ms