RNA–Protein interactions for RNA: ENST00000372862.7

PABPC4-204, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5 BASIC

Gene PABPC4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-204ENST00000372862 MT1GP13640 62 aa6.84□□□□□ -1.31
PABPC4-204ENST00000372862 SPRR2FQ96RM1 72 aa6.79□□□□□ -1.32
PABPC4-204ENST00000372862 MT1MQ8N339 61 aa6.78□□□□□ -1.32
PABPC4-204ENST00000372862 MUC12Q9UKN1 5478 aa6.76□□□□□ -1.33
PABPC4-204ENST00000372862 MACF1Q9UPN3 7388 aaKnown RBP6.74□□□□□ -1.33
PABPC4-204ENST00000372862 CRCT1Q9UGL9 99 aa6.73□□□□□ -1.33
PABPC4-204ENST00000372862 KRTAP4-3Q9BYR4 195 aa6.71□□□□□ -1.34
PABPC4-204ENST00000372862 LCE5AQ5TCM9 118 aa6.68□□□□□ -1.34
PABPC4-204ENST00000372862 KRTAP2-3P0C7H8 128 aa6.63□□□□□ -1.35
PABPC4-204ENST00000372862 KRTAP2-4Q9BYR9 128 aa6.63□□□□□ -1.35
PABPC4-204ENST00000372862 KRTAP2-1Q9BYU5 128 aa6.63□□□□□ -1.35
PABPC4-204ENST00000372862 LOC100996750A0A140TA64 210 aa6.59□□□□□ -1.35
PABPC4-204ENST00000372862 INE1O15225 51 aa6.58□□□□□ -1.36
PABPC4-204ENST00000372862 KRTAP5-9P26371 169 aa6.52□□□□□ -1.37
PABPC4-204ENST00000372862 SYNE2Q8WXH0 6885 aaKnown RBP6.47□□□□□ -1.37
PABPC4-204ENST00000372862 LCE1AQ5T7P2 110 aa6.4□□□□□ -1.38
PABPC4-204ENST00000372862 DSTQ03001 7570 aaKnown RBP6.36□□□□□ -1.39
PABPC4-204ENST00000372862 SPRR2EP22531 72 aa6.32□□□□□ -1.4
PABPC4-204ENST00000372862 SPRR2BP35325 72 aa6.32□□□□□ -1.4
PABPC4-204ENST00000372862 SPRR2AP35326 72 aa6.32□□□□□ -1.4
PABPC4-204ENST00000372862 MDN1Q9NU22 5596 aa6.31□□□□□ -1.4
PABPC4-204ENST00000372862 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.2□□□□□ -1.42
PABPC4-204ENST00000372862 KRTAP6-3Q3LI67 103 aa6.19□□□□□ -1.42
PABPC4-204ENST00000372862 KRTAP9-6A0A140TA67 174 aa6.14□□□□□ -1.43
PABPC4-204ENST00000372862 SPRR2DP22532 72 aa6.07□□□□□ -1.44
PABPC4-204ENST00000372862 MT1AP04731 61 aa6.06□□□□□ -1.44
PABPC4-204ENST00000372862 KRTAP5-5Q701N2 237 aaPredicted RBP6.04□□□□□ -1.44
PABPC4-204ENST00000372862 KRTAP6-1Q3LI64 71 aa6.04□□□□□ -1.44
PABPC4-204ENST00000372862 LCE3BQ5TA77 95 aa6□□□□□ -1.45
PABPC4-204ENST00000372862 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
PABPC4-204ENST00000372862 KRTAP12-4P60329 112 aa5.75□□□□□ -1.49
PABPC4-204ENST00000372862 KRTAP4-9Q9BYQ8 210 aa5.74□□□□□ -1.49
PABPC4-204ENST00000372862 KRTAP9-4Q9BYQ2 154 aa5.73□□□□□ -1.49
PABPC4-204ENST00000372862 KRTAP9-7A8MTY7 169 aa5.7□□□□□ -1.5
PABPC4-204ENST00000372862 NEBP20929 6669 aa5.64□□□□□ -1.51
PABPC4-204ENST00000372862 LCE3DQ9BYE3 92 aa5.6□□□□□ -1.51
PABPC4-204ENST00000372862 KRTAP5-4Q6L8H1 288 aa5.54□□□□□ -1.52
PABPC4-204ENST00000372862 LCE3EQ5T5B0 92 aa5.5□□□□□ -1.53
PABPC4-204ENST00000372862 MT3P25713 68 aa5.49□□□□□ -1.53
PABPC4-204ENST00000372862 KRTAP6-2Q3LI66 62 aa5.49□□□□□ -1.53
PABPC4-204ENST00000372862 LCE4AQ5TA78 99 aa5.35□□□□□ -1.55
PABPC4-204ENST00000372862 MT4P47944 62 aa5.28□□□□□ -1.56
PABPC4-204ENST00000372862 KRTAP4-6Q9BYQ5 205 aa5.28□□□□□ -1.56
PABPC4-204ENST00000372862 KRTAP2-2Q9BYT5 123 aa5.25□□□□□ -1.57
PABPC4-204ENST00000372862 OBSCNQ5VST9 7968 aa5.2□□□□□ -1.58
PABPC4-204ENST00000372862 KRTAP20-2Q3LI61 65 aa5.19□□□□□ -1.58
PABPC4-204ENST00000372862 KRTAP5-2Q701N4 177 aa5.11□□□□□ -1.59
PABPC4-204ENST00000372862 KRTAP20-1Q3LI63 56 aa5.08□□□□□ -1.6
PABPC4-204ENST00000372862 LCE1DQ5T752 114 aa5.08□□□□□ -1.6
PABPC4-204ENST00000372862 PRM1P04553 51 aa5.02□□□□□ -1.61
PABPC4-204ENST00000372862 HMCN1Q96RW7 5635 aa5.02□□□□□ -1.61
PABPC4-204ENST00000372862 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
PABPC4-204ENST00000372862 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
PABPC4-204ENST00000372862 MUC5ACP98088 5654 aa4.46□□□□□ -1.7
PABPC4-204ENST00000372862 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
PABPC4-204ENST00000372862 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
PABPC4-204ENST00000372862 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
PABPC4-204ENST00000372862 KRTAP5-10Q6L8G5 202 aa4.35□□□□□ -1.71
PABPC4-204ENST00000372862 LCE1CQ5T751 118 aa4.33□□□□□ -1.72
PABPC4-204ENST00000372862 KRTAP4-2Q9BYR5 136 aa4.31□□□□□ -1.72
PABPC4-204ENST00000372862 KRTAP5-8O75690 187 aa4.21□□□□□ -1.74
PABPC4-204ENST00000372862 AHNAK2Q8IVF2 5795 aa4.2□□□□□ -1.74
PABPC4-204ENST00000372862 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
PABPC4-204ENST00000372862 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
PABPC4-204ENST00000372862 KRTAP21-2Q3LI59 83 aa3.93□□□□□ -1.78
PABPC4-204ENST00000372862 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
PABPC4-204ENST00000372862 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
PABPC4-204ENST00000372862 GPR98Q8WXG9 6306 aa3.69□□□□□ -1.82
PABPC4-204ENST00000372862 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
PABPC4-204ENST00000372862 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
PABPC4-204ENST00000372862 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
PABPC4-204ENST00000372862 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
PABPC4-204ENST00000372862 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
PABPC4-204ENST00000372862 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
PABPC4-204ENST00000372862 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
PABPC4-204ENST00000372862 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
PABPC4-204ENST00000372862 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms