RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 DSTQ03001 7570 aaKnown RBP5.36□□□□□ -1.55
PABPC4-202ENST00000372857 MT1LQ93083 61 aa5.32□□□□□ -1.56
PABPC4-202ENST00000372857 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
PABPC4-202ENST00000372857 MT1EP04732 61 aa5.26□□□□□ -1.57
PABPC4-202ENST00000372857 KRTAP9-6A0A140TA67 174 aa5.23□□□□□ -1.57
PABPC4-202ENST00000372857 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
PABPC4-202ENST00000372857 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
PABPC4-202ENST00000372857 LOC100996750A0A140TA64 210 aa5.2□□□□□ -1.58
PABPC4-202ENST00000372857 KRTAP19-4Q3LI73 84 aa5.14□□□□□ -1.59
PABPC4-202ENST00000372857 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
PABPC4-202ENST00000372857 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
PABPC4-202ENST00000372857 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.59
PABPC4-202ENST00000372857 MT1GP13640 62 aa5.09□□□□□ -1.59
PABPC4-202ENST00000372857 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
PABPC4-202ENST00000372857 SYNE2Q8WXH0 6885 aaKnown RBP5.07□□□□□ -1.6
PABPC4-202ENST00000372857 SYNE1Q8NF91 8797 aaKnown RBP5.03□□□□□ -1.6
PABPC4-202ENST00000372857 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
PABPC4-202ENST00000372857 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
PABPC4-202ENST00000372857 SPRR2FQ96RM1 72 aa4.94□□□□□ -1.62
PABPC4-202ENST00000372857 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.91□□□□□ -1.62
PABPC4-202ENST00000372857 MT1MQ8N339 61 aa4.91□□□□□ -1.62
PABPC4-202ENST00000372857 MDN1Q9NU22 5596 aa4.91□□□□□ -1.62
PABPC4-202ENST00000372857 KRTAP19-3Q7Z4W3 81 aa4.89□□□□□ -1.63
PABPC4-202ENST00000372857 KRTAP9-7A8MTY7 169 aa4.87□□□□□ -1.63
PABPC4-202ENST00000372857 LCE1FQ5T754 118 aa4.86□□□□□ -1.63
PABPC4-202ENST00000372857 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
PABPC4-202ENST00000372857 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
PABPC4-202ENST00000372857 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
PABPC4-202ENST00000372857 KRTAP2-2Q9BYT5 123 aa4.71□□□□□ -1.66
PABPC4-202ENST00000372857 KRTAP6-3Q3LI67 103 aa4.59□□□□□ -1.68
PABPC4-202ENST00000372857 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
PABPC4-202ENST00000372857 LCE1AQ5T7P2 110 aa4.56□□□□□ -1.68
PABPC4-202ENST00000372857 LCE3DQ9BYE3 92 aa4.56□□□□□ -1.68
PABPC4-202ENST00000372857 MT1AP04731 61 aa4.56□□□□□ -1.68
PABPC4-202ENST00000372857 PRM1P04553 51 aa4.56□□□□□ -1.68
PABPC4-202ENST00000372857 KRTAP5-9P26371 169 aa4.53□□□□□ -1.68
PABPC4-202ENST00000372857 LCE3EQ5T5B0 92 aa4.52□□□□□ -1.69
PABPC4-202ENST00000372857 KRTAP5-5Q701N2 237 aaPredicted RBP4.52□□□□□ -1.69
PABPC4-202ENST00000372857 NEBP20929 6669 aa4.47□□□□□ -1.69
PABPC4-202ENST00000372857 SPRR2EP22531 72 aa4.46□□□□□ -1.7
PABPC4-202ENST00000372857 SPRR2BP35325 72 aa4.46□□□□□ -1.7
PABPC4-202ENST00000372857 SPRR2AP35326 72 aa4.46□□□□□ -1.7
PABPC4-202ENST00000372857 LCE1EQ5T753 118 aa4.43□□□□□ -1.7
PABPC4-202ENST00000372857 KRTAP6-2Q3LI66 62 aa4.29□□□□□ -1.72
PABPC4-202ENST00000372857 SPRR2DP22532 72 aa4.24□□□□□ -1.73
PABPC4-202ENST00000372857 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
PABPC4-202ENST00000372857 KRTAP20-1Q3LI63 56 aa4.15□□□□□ -1.75
PABPC4-202ENST00000372857 MT3P25713 68 aa4.09□□□□□ -1.75
PABPC4-202ENST00000372857 MT4P47944 62 aa3.92□□□□□ -1.78
PABPC4-202ENST00000372857 KRTAP4-6Q9BYQ5 205 aa3.88□□□□□ -1.79
PABPC4-202ENST00000372857 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
PABPC4-202ENST00000372857 HMCN1Q96RW7 5635 aa3.75□□□□□ -1.81
PABPC4-202ENST00000372857 KRTAP5-4Q6L8H1 288 aa3.69□□□□□ -1.82
PABPC4-202ENST00000372857 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
PABPC4-202ENST00000372857 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
PABPC4-202ENST00000372857 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
PABPC4-202ENST00000372857 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
PABPC4-202ENST00000372857 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
PABPC4-202ENST00000372857 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
PABPC4-202ENST00000372857 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.86
PABPC4-202ENST00000372857 KRTAP5-3Q6L8H2 238 aa3.39□□□□□ -1.87
PABPC4-202ENST00000372857 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
PABPC4-202ENST00000372857 KRTAP5-10Q6L8G5 202 aa3.27□□□□□ -1.89
PABPC4-202ENST00000372857 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
PABPC4-202ENST00000372857 KRTAP4-2Q9BYR5 136 aa3.06□□□□□ -1.92
PABPC4-202ENST00000372857 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
PABPC4-202ENST00000372857 KRTAP5-7Q6L8G8 165 aa3.01□□□□□ -1.93
PABPC4-202ENST00000372857 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
PABPC4-202ENST00000372857 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
PABPC4-202ENST00000372857 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
PABPC4-202ENST00000372857 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
PABPC4-202ENST00000372857 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
PABPC4-202ENST00000372857 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
PABPC4-202ENST00000372857 AHNAKQ09666 5890 aaKnown RBP2.62□□□□□ -1.99
PABPC4-202ENST00000372857 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
PABPC4-202ENST00000372857 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
PABPC4-202ENST00000372857 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 59.6 ms