RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 KRTAP2-4Q9BYR9 128 aa5.66□□□□□ -1.5
PCIF1-201ENST00000372409 KRTAP2-1Q9BYU5 128 aa5.66□□□□□ -1.5
PCIF1-201ENST00000372409 KRTAP19-6Q3LI70 58 aa5.64□□□□□ -1.51
PCIF1-201ENST00000372409 KRTAP4-3Q9BYR4 195 aa5.56□□□□□ -1.52
PCIF1-201ENST00000372409 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
PCIF1-201ENST00000372409 LCE2DQ5TA82 110 aaPredicted RBP5.46□□□□□ -1.53
PCIF1-201ENST00000372409 MT1GP13640 62 aa5.45□□□□□ -1.54
PCIF1-201ENST00000372409 CRCT1Q9UGL9 99 aa5.44□□□□□ -1.54
PCIF1-201ENST00000372409 MACF1Q9UPN3 7388 aaKnown RBP5.41□□□□□ -1.54
PCIF1-201ENST00000372409 KRTAP19-3Q7Z4W3 81 aa5.4□□□□□ -1.55
PCIF1-201ENST00000372409 MT1MQ8N339 61 aa5.4□□□□□ -1.55
PCIF1-201ENST00000372409 SYNE2Q8WXH0 6885 aaKnown RBP5.36□□□□□ -1.55
PCIF1-201ENST00000372409 MDN1Q9NU22 5596 aa5.3□□□□□ -1.56
PCIF1-201ENST00000372409 SPRR2FQ96RM1 72 aa5.26□□□□□ -1.57
PCIF1-201ENST00000372409 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
PCIF1-201ENST00000372409 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
PCIF1-201ENST00000372409 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
PCIF1-201ENST00000372409 LCE3BQ5TA77 95 aa5.07□□□□□ -1.6
PCIF1-201ENST00000372409 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
PCIF1-201ENST00000372409 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.61
PCIF1-201ENST00000372409 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
PCIF1-201ENST00000372409 KRTAP6-1Q3LI64 71 aa4.92□□□□□ -1.62
PCIF1-201ENST00000372409 MT1AP04731 61 aa4.84□□□□□ -1.63
PCIF1-201ENST00000372409 LCE1AQ5T7P2 110 aa4.84□□□□□ -1.63
PCIF1-201ENST00000372409 SPRR2EP22531 72 aa4.77□□□□□ -1.65
PCIF1-201ENST00000372409 SPRR2BP35325 72 aa4.77□□□□□ -1.65
PCIF1-201ENST00000372409 SPRR2AP35326 72 aa4.77□□□□□ -1.65
PCIF1-201ENST00000372409 KRTAP5-9P26371 169 aa4.75□□□□□ -1.65
PCIF1-201ENST00000372409 LCE3DQ9BYE3 92 aa4.74□□□□□ -1.65
PCIF1-201ENST00000372409 KRTAP5-5Q701N2 237 aaPredicted RBP4.72□□□□□ -1.65
PCIF1-201ENST00000372409 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
PCIF1-201ENST00000372409 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
PCIF1-201ENST00000372409 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
PCIF1-201ENST00000372409 SPRR2DP22532 72 aa4.55□□□□□ -1.68
PCIF1-201ENST00000372409 KRTAP9-6A0A140TA67 174 aa4.53□□□□□ -1.68
PCIF1-201ENST00000372409 PRM1P04553 51 aa4.5□□□□□ -1.69
PCIF1-201ENST00000372409 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.43□□□□□ -1.7
PCIF1-201ENST00000372409 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
PCIF1-201ENST00000372409 MT3P25713 68 aa4.36□□□□□ -1.71
PCIF1-201ENST00000372409 KRTAP6-3Q3LI67 103 aa4.34□□□□□ -1.72
PCIF1-201ENST00000372409 MT4P47944 62 aa4.15□□□□□ -1.74
PCIF1-201ENST00000372409 KRTAP4-6Q9BYQ5 205 aa4.15□□□□□ -1.75
PCIF1-201ENST00000372409 NEBP20929 6669 aa4.14□□□□□ -1.75
PCIF1-201ENST00000372409 KRTAP5-4Q6L8H1 288 aa4.12□□□□□ -1.75
PCIF1-201ENST00000372409 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
PCIF1-201ENST00000372409 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
PCIF1-201ENST00000372409 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
PCIF1-201ENST00000372409 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
PCIF1-201ENST00000372409 KRTAP5-2Q701N4 177 aa3.86□□□□□ -1.79
PCIF1-201ENST00000372409 LCE1DQ5T752 114 aa3.82□□□□□ -1.8
PCIF1-201ENST00000372409 KRTAP20-1Q3LI63 56 aa3.69□□□□□ -1.82
PCIF1-201ENST00000372409 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
PCIF1-201ENST00000372409 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
PCIF1-201ENST00000372409 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
PCIF1-201ENST00000372409 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
PCIF1-201ENST00000372409 KRTAP5-10Q6L8G5 202 aa3.43□□□□□ -1.86
PCIF1-201ENST00000372409 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
PCIF1-201ENST00000372409 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
PCIF1-201ENST00000372409 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
PCIF1-201ENST00000372409 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
PCIF1-201ENST00000372409 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
PCIF1-201ENST00000372409 AHNAK2Q8IVF2 5795 aa3.17□□□□□ -1.9
PCIF1-201ENST00000372409 KRTAP21-2Q3LI59 83 aa3.15□□□□□ -1.91
PCIF1-201ENST00000372409 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
PCIF1-201ENST00000372409 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
PCIF1-201ENST00000372409 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
PCIF1-201ENST00000372409 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
PCIF1-201ENST00000372409 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
PCIF1-201ENST00000372409 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
PCIF1-201ENST00000372409 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
PCIF1-201ENST00000372409 KRTAP4-12Q9BQ66 201 aa2.93□□□□□ -1.94
PCIF1-201ENST00000372409 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.95
PCIF1-201ENST00000372409 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
PCIF1-201ENST00000372409 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.98
PCIF1-201ENST00000372409 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
PCIF1-201ENST00000372409 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
PCIF1-201ENST00000372409 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 6.4 ms