RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 MT1GP13640 62 aa7.22□□□□□ -1.25
TMEM53-205ENST00000372244 PSPHP1O15172 72 aa7.2□□□□□ -1.26
TMEM53-205ENST00000372244 BRK1Q8WUW1 75 aa7.19□□□□□ -1.26
TMEM53-205ENST00000372244 MIR22HGQ0VDD5 57 aa7.18□□□□□ -1.26
TMEM53-205ENST00000372244 MT1LQ93083 61 aa7.15□□□□□ -1.27
TMEM53-205ENST00000372244 PP632Q6XCG6 107 aa7.11□□□□□ -1.27
TMEM53-205ENST00000372244 MT1MQ8N339 61 aa7.07□□□□□ -1.28
TMEM53-205ENST00000372244 K7ERS5 55 aa6.99□□□□□ -1.29
TMEM53-205ENST00000372244 CDC42SE1Q9NRR8 79 aa6.98□□□□□ -1.29
TMEM53-205ENST00000372244 KRTAP12-3P60328 96 aa6.98□□□□□ -1.29
TMEM53-205ENST00000372244 KRTAP25-1Q3LHN0 102 aa6.98□□□□□ -1.29
TMEM53-205ENST00000372244 A6NED7 52 aa6.97□□□□□ -1.29
TMEM53-205ENST00000372244 KRTAP4-3Q9BYR4 195 aa6.91□□□□□ -1.3
TMEM53-205ENST00000372244 KRTAP4-9Q9BYQ8 210 aa6.85□□□□□ -1.31
TMEM53-205ENST00000372244 PMAIP1Q13794 54 aa6.83□□□□□ -1.32
TMEM53-205ENST00000372244 KRTAP4-7Q9BYR0 210 aa6.79□□□□□ -1.32
TMEM53-205ENST00000372244 KRTAP23-1A1A580 65 aa6.77□□□□□ -1.33
TMEM53-205ENST00000372244 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
TMEM53-205ENST00000372244 LCE1DQ5T752 114 aa6.73□□□□□ -1.33
TMEM53-205ENST00000372244 KRTAP5-4Q6L8H1 288 aa6.71□□□□□ -1.34
TMEM53-205ENST00000372244 KTN1-AS1Q86SY8 53 aa6.7□□□□□ -1.34
TMEM53-205ENST00000372244 KRTAP19-4Q3LI73 84 aa6.65□□□□□ -1.35
TMEM53-205ENST00000372244 MT4P47944 62 aa6.64□□□□□ -1.35
TMEM53-205ENST00000372244 HMCN1Q96RW7 5635 aa6.63□□□□□ -1.35
TMEM53-205ENST00000372244 ROMO1P60602 79 aa6.58□□□□□ -1.36
TMEM53-205ENST00000372244 GPR98Q8WXG9 6306 aa6.58□□□□□ -1.36
TMEM53-205ENST00000372244 KRTAP15-1Q3LI76 137 aa6.57□□□□□ -1.36
TMEM53-205ENST00000372244 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
TMEM53-205ENST00000372244 KRTAP5-5Q701N2 237 aaPredicted RBP6.51□□□□□ -1.37
TMEM53-205ENST00000372244 LCE3CQ5T5A8 94 aa6.46□□□□□ -1.38
TMEM53-205ENST00000372244 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
TMEM53-205ENST00000372244 PRAC1Q96KF2 57 aa6.37□□□□□ -1.39
TMEM53-205ENST00000372244 AHNAK2Q8IVF2 5795 aa6.32□□□□□ -1.4
TMEM53-205ENST00000372244 SPRR5A0A1B0GTR4 108 aa6.3□□□□□ -1.4
TMEM53-205ENST00000372244 KRTAP20-2Q3LI61 65 aa6.28□□□□□ -1.4
TMEM53-205ENST00000372244 KRTAP12-4P60329 112 aa6.28□□□□□ -1.4
TMEM53-205ENST00000372244 KRTAP5-10Q6L8G5 202 aa6.21□□□□□ -1.42
TMEM53-205ENST00000372244 SYNE1Q8NF91 8797 aaKnown RBP6.2□□□□□ -1.42
TMEM53-205ENST00000372244 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
TMEM53-205ENST00000372244 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
TMEM53-205ENST00000372244 MT1AP04731 61 aa6.07□□□□□ -1.44
TMEM53-205ENST00000372244 KRTAP6-1Q3LI64 71 aa6.03□□□□□ -1.44
TMEM53-205ENST00000372244 KRTAP5-7Q6L8G8 165 aa5.95□□□□□ -1.46
TMEM53-205ENST00000372244 KRTAP5-2Q701N4 177 aa5.9□□□□□ -1.47
TMEM53-205ENST00000372244 KRTAP9-4Q9BYQ2 154 aa5.88□□□□□ -1.47
TMEM53-205ENST00000372244 KRTAP6-2Q3LI66 62 aa5.74□□□□□ -1.49
TMEM53-205ENST00000372244 KRTAP4-11Q9BYQ6 195 aa5.73□□□□□ -1.49
TMEM53-205ENST00000372244 MT3P25713 68 aa5.56□□□□□ -1.52
TMEM53-205ENST00000372244 KRTAP5-8O75690 187 aa5.53□□□□□ -1.52
TMEM53-205ENST00000372244 OBSCNQ5VST9 7968 aa5.53□□□□□ -1.52
TMEM53-205ENST00000372244 H3BS24 57 aa5.29□□□□□ -1.56
TMEM53-205ENST00000372244 KRTAP5-1Q6L8H4 278 aa5.27□□□□□ -1.57
TMEM53-205ENST00000372244 NDUFAF8A1L188 74 aa5.26□□□□□ -1.57
TMEM53-205ENST00000372244 MUC5BQ9HC84 5762 aaPredicted RBP5.23□□□□□ -1.57
TMEM53-205ENST00000372244 KRTAP9-9Q9BYP9 154 aa5.19□□□□□ -1.58
TMEM53-205ENST00000372244 MUC5ACP98088 5654 aa5.17□□□□□ -1.58
TMEM53-205ENST00000372244 AHNAKQ09666 5890 aaKnown RBP5.16□□□□□ -1.58
TMEM53-205ENST00000372244 LCE1EQ5T753 118 aa5.11□□□□□ -1.59
TMEM53-205ENST00000372244 LUZP6Q538Z0 58 aa5.05□□□□□ -1.6
TMEM53-205ENST00000372244 A0A0A0MQY5 61 aa4.86□□□□□ -1.63
TMEM53-205ENST00000372244 KRTAP4-2Q9BYR5 136 aa4.8□□□□□ -1.64
TMEM53-205ENST00000372244 LCE1CQ5T751 118 aa4.74□□□□□ -1.65
TMEM53-205ENST00000372244 LCE1BQ5T7P3 118 aa4.74□□□□□ -1.65
TMEM53-205ENST00000372244 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
TMEM53-205ENST00000372244 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
TMEM53-205ENST00000372244 INE1O15225 51 aa4.39□□□□□ -1.71
TMEM53-205ENST00000372244 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
TMEM53-205ENST00000372244 KRTAP4-12Q9BQ66 201 aa4.26□□□□□ -1.73
TMEM53-205ENST00000372244 KRTAP5-11Q6L8G4 156 aa4.25□□□□□ -1.73
TMEM53-205ENST00000372244 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
TMEM53-205ENST00000372244 KRTAP21-2Q3LI59 83 aa4□□□□□ -1.77
TMEM53-205ENST00000372244 PHGR1C9JFL3 82 aa3.68□□□□□ -1.82
TMEM53-205ENST00000372244 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
TMEM53-205ENST00000372244 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.87
TMEM53-205ENST00000372244 PRM1P04553 51 aa3.35□□□□□ -1.87
TMEM53-205ENST00000372244 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
TMEM53-205ENST00000372244 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 43.3 ms