RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 KRTAP2-4Q9BYR9 128 aa6.9□□□□□ -1.3
VEGFA-204ENST00000372064 KRTAP2-1Q9BYU5 128 aa6.9□□□□□ -1.3
VEGFA-204ENST00000372064 MUC12Q9UKN1 5478 aa6.9□□□□□ -1.3
VEGFA-204ENST00000372064 KRTAP4-3Q9BYR4 195 aa6.84□□□□□ -1.31
VEGFA-204ENST00000372064 KRTAP19-3Q7Z4W3 81 aa6.83□□□□□ -1.32
VEGFA-204ENST00000372064 MT1MQ8N339 61 aa6.79□□□□□ -1.32
VEGFA-204ENST00000372064 MT1GP13640 62 aa6.78□□□□□ -1.32
VEGFA-204ENST00000372064 LOC100996750A0A140TA64 210 aa6.74□□□□□ -1.33
VEGFA-204ENST00000372064 SPRR2FQ96RM1 72 aa6.71□□□□□ -1.34
VEGFA-204ENST00000372064 MACF1Q9UPN3 7388 aaKnown RBP6.69□□□□□ -1.34
VEGFA-204ENST00000372064 LCE5AQ5TCM9 118 aa6.63□□□□□ -1.35
VEGFA-204ENST00000372064 KRTAP9-2Q9BYQ4 174 aa6.59□□□□□ -1.35
VEGFA-204ENST00000372064 CRCT1Q9UGL9 99 aa6.55□□□□□ -1.36
VEGFA-204ENST00000372064 DSTQ03001 7570 aaKnown RBP6.52□□□□□ -1.37
VEGFA-204ENST00000372064 SYNE2Q8WXH0 6885 aaKnown RBP6.48□□□□□ -1.37
VEGFA-204ENST00000372064 MDN1Q9NU22 5596 aa6.37□□□□□ -1.39
VEGFA-204ENST00000372064 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
VEGFA-204ENST00000372064 LCE1AQ5T7P2 110 aa6.3□□□□□ -1.4
VEGFA-204ENST00000372064 SPRR2EP22531 72 aa6.18□□□□□ -1.42
VEGFA-204ENST00000372064 SPRR2BP35325 72 aa6.18□□□□□ -1.42
VEGFA-204ENST00000372064 SPRR2AP35326 72 aa6.18□□□□□ -1.42
VEGFA-204ENST00000372064 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
VEGFA-204ENST00000372064 KRTAP6-1Q3LI64 71 aa6.11□□□□□ -1.43
VEGFA-204ENST00000372064 MT1AP04731 61 aa6.08□□□□□ -1.44
VEGFA-204ENST00000372064 KRTAP5-5Q701N2 237 aaPredicted RBP6.07□□□□□ -1.44
VEGFA-204ENST00000372064 KRTAP12-4P60329 112 aa5.98□□□□□ -1.45
VEGFA-204ENST00000372064 SYNE1Q8NF91 8797 aaKnown RBP5.97□□□□□ -1.45
VEGFA-204ENST00000372064 KRTAP4-9Q9BYQ8 210 aa5.96□□□□□ -1.46
VEGFA-204ENST00000372064 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.94□□□□□ -1.46
VEGFA-204ENST00000372064 SPRR2DP22532 72 aa5.92□□□□□ -1.46
VEGFA-204ENST00000372064 KRTAP6-3Q3LI67 103 aa5.92□□□□□ -1.46
VEGFA-204ENST00000372064 OBSCNQ5VST9 7968 aa5.8□□□□□ -1.48
VEGFA-204ENST00000372064 KRTAP9-6A0A140TA67 174 aa5.77□□□□□ -1.49
VEGFA-204ENST00000372064 KRTAP9-4Q9BYQ2 154 aa5.73□□□□□ -1.49
VEGFA-204ENST00000372064 LCE3DQ9BYE3 92 aa5.71□□□□□ -1.49
VEGFA-204ENST00000372064 LCE3EQ5T5B0 92 aa5.63□□□□□ -1.51
VEGFA-204ENST00000372064 KRTAP6-2Q3LI66 62 aa5.51□□□□□ -1.53
VEGFA-204ENST00000372064 NEBP20929 6669 aa5.51□□□□□ -1.53
VEGFA-204ENST00000372064 MT3P25713 68 aa5.46□□□□□ -1.54
VEGFA-204ENST00000372064 KRTAP5-4Q6L8H1 288 aa5.45□□□□□ -1.54
VEGFA-204ENST00000372064 KRTAP9-7A8MTY7 169 aa5.4□□□□□ -1.55
VEGFA-204ENST00000372064 PRM1P04553 51 aa5.26□□□□□ -1.57
VEGFA-204ENST00000372064 KRTAP4-6Q9BYQ5 205 aa5.25□□□□□ -1.57
VEGFA-204ENST00000372064 MT4P47944 62 aa5.21□□□□□ -1.57
VEGFA-204ENST00000372064 LCE4AQ5TA78 99 aa5.14□□□□□ -1.59
VEGFA-204ENST00000372064 KRTAP20-2Q3LI61 65 aa5.1□□□□□ -1.59
VEGFA-204ENST00000372064 KRTAP5-2Q701N4 177 aa5.07□□□□□ -1.6
VEGFA-204ENST00000372064 KRTAP2-2Q9BYT5 123 aa5.01□□□□□ -1.61
VEGFA-204ENST00000372064 HMCN1Q96RW7 5635 aa4.99□□□□□ -1.61
VEGFA-204ENST00000372064 LCE1DQ5T752 114 aa4.96□□□□□ -1.61
VEGFA-204ENST00000372064 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
VEGFA-204ENST00000372064 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
VEGFA-204ENST00000372064 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
VEGFA-204ENST00000372064 KRTAP9-9Q9BYP9 154 aa4.6□□□□□ -1.67
VEGFA-204ENST00000372064 MUC5ACP98088 5654 aa4.56□□□□□ -1.68
VEGFA-204ENST00000372064 LCE1FQ5T754 118 aa4.53□□□□□ -1.68
VEGFA-204ENST00000372064 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
VEGFA-204ENST00000372064 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
VEGFA-204ENST00000372064 KRTAP5-10Q6L8G5 202 aa4.35□□□□□ -1.71
VEGFA-204ENST00000372064 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
VEGFA-204ENST00000372064 KRTAP4-2Q9BYR5 136 aa4.3□□□□□ -1.72
VEGFA-204ENST00000372064 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
VEGFA-204ENST00000372064 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
VEGFA-204ENST00000372064 KRTAP5-8O75690 187 aa4.1□□□□□ -1.75
VEGFA-204ENST00000372064 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
VEGFA-204ENST00000372064 AHNAK2Q8IVF2 5795 aa4.07□□□□□ -1.76
VEGFA-204ENST00000372064 KRTAP5-7Q6L8G8 165 aa4.05□□□□□ -1.76
VEGFA-204ENST00000372064 KRTAP21-2Q3LI59 83 aa3.97□□□□□ -1.77
VEGFA-204ENST00000372064 MUC19Q7Z5P9 8384 aa3.95□□□□□ -1.78
VEGFA-204ENST00000372064 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
VEGFA-204ENST00000372064 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
VEGFA-204ENST00000372064 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
VEGFA-204ENST00000372064 GPR98Q8WXG9 6306 aa3.48□□□□□ -1.85
VEGFA-204ENST00000372064 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
VEGFA-204ENST00000372064 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
VEGFA-204ENST00000372064 AHNAKQ09666 5890 aaKnown RBP2.86□□□□□ -1.95
VEGFA-204ENST00000372064 MUC16Q8WXI7 14507 aa2.18□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 69.8 ms