RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 SPRR2BP35325 72 aa4.5□□□□□ -1.69
EXOSC1-203ENST00000370886 SPRR2AP35326 72 aa4.5□□□□□ -1.69
EXOSC1-203ENST00000370886 PRO2289Q9P1D8 64 aa4.49□□□□□ -1.69
EXOSC1-203ENST00000370886 ROMO1P60602 79 aa4.48□□□□□ -1.69
EXOSC1-203ENST00000370886 MT1XP80297 61 aa4.47□□□□□ -1.69
EXOSC1-203ENST00000370886 SPRR2FQ96RM1 72 aa4.47□□□□□ -1.69
EXOSC1-203ENST00000370886 KRTAP25-1Q3LHN0 102 aa4.45□□□□□ -1.7
EXOSC1-203ENST00000370886 SPINT4Q6UDR6 99 aa4.45□□□□□ -1.7
EXOSC1-203ENST00000370886 CAMK2N1Q7Z7J9 78 aa4.44□□□□□ -1.7
EXOSC1-203ENST00000370886 K7ERS5 55 aa4.41□□□□□ -1.7
EXOSC1-203ENST00000370886 KRTAP12-1P59990 96 aa4.37□□□□□ -1.71
EXOSC1-203ENST00000370886 SPRR2DP22532 72 aa4.36□□□□□ -1.71
EXOSC1-203ENST00000370886 KRTAP12-2P59991 146 aa4.36□□□□□ -1.71
EXOSC1-203ENST00000370886 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
EXOSC1-203ENST00000370886 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
EXOSC1-203ENST00000370886 KRTAP8-1Q8IUC2 63 aa4.33□□□□□ -1.72
EXOSC1-203ENST00000370886 KRTAP10-7P60409 375 aaPredicted RBP4.29□□□□□ -1.72
EXOSC1-203ENST00000370886 GPR98Q8WXG9 6306 aa4.27□□□□□ -1.73
EXOSC1-203ENST00000370886 LCE5AQ5TCM9 118 aa4.24□□□□□ -1.73
EXOSC1-203ENST00000370886 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
EXOSC1-203ENST00000370886 KRTAP10-12P60413 245 aa4.22□□□□□ -1.73
EXOSC1-203ENST00000370886 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
EXOSC1-203ENST00000370886 DSTQ03001 7570 aaKnown RBP4.12□□□□□ -1.75
EXOSC1-203ENST00000370886 TNP1P09430 55 aa4.12□□□□□ -1.75
EXOSC1-203ENST00000370886 NDUFAF8A1L188 74 aa4.07□□□□□ -1.76
EXOSC1-203ENST00000370886 LUZP6Q538Z0 58 aa4.01□□□□□ -1.77
EXOSC1-203ENST00000370886 LCE3AQ5TA76 89 aa4.01□□□□□ -1.77
EXOSC1-203ENST00000370886 KRTAP19-5Q3LI72 72 aa3.99□□□□□ -1.77
EXOSC1-203ENST00000370886 KRTAP19-7Q3SYF9 63 aa3.97□□□□□ -1.77
EXOSC1-203ENST00000370886 MT1EP04732 61 aa3.94□□□□□ -1.78
EXOSC1-203ENST00000370886 KRTAP12-3P60328 96 aa3.86□□□□□ -1.79
EXOSC1-203ENST00000370886 HMCN1Q96RW7 5635 aa3.85□□□□□ -1.79
EXOSC1-203ENST00000370886 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
EXOSC1-203ENST00000370886 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
EXOSC1-203ENST00000370886 AHNAK2Q8IVF2 5795 aa3.83□□□□□ -1.8
EXOSC1-203ENST00000370886 MT4P47944 62 aa3.83□□□□□ -1.8
EXOSC1-203ENST00000370886 MT1LQ93083 61 aa3.81□□□□□ -1.8
EXOSC1-203ENST00000370886 PP632Q6XCG6 107 aa3.8□□□□□ -1.8
EXOSC1-203ENST00000370886 MT1GP13640 62 aa3.79□□□□□ -1.8
EXOSC1-203ENST00000370886 KRTAP5-7Q6L8G8 165 aa3.76□□□□□ -1.81
EXOSC1-203ENST00000370886 MT1MQ8N339 61 aa3.74□□□□□ -1.81
EXOSC1-203ENST00000370886 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
EXOSC1-203ENST00000370886 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
EXOSC1-203ENST00000370886 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
EXOSC1-203ENST00000370886 INE1O15225 51 aa3.58□□□□□ -1.84
EXOSC1-203ENST00000370886 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
EXOSC1-203ENST00000370886 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
EXOSC1-203ENST00000370886 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
EXOSC1-203ENST00000370886 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
EXOSC1-203ENST00000370886 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
EXOSC1-203ENST00000370886 KRTAP9-6A8MVA2 160 aa3.34□□□□□ -1.87
EXOSC1-203ENST00000370886 MT3P25713 68 aa3.32□□□□□ -1.88
EXOSC1-203ENST00000370886 AHNAKQ09666 5890 aaKnown RBP3.26□□□□□ -1.89
EXOSC1-203ENST00000370886 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
EXOSC1-203ENST00000370886 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
EXOSC1-203ENST00000370886 MT1AP04731 61 aa3.24□□□□□ -1.89
EXOSC1-203ENST00000370886 MUC5BQ9HC84 5762 aaPredicted RBP3.23□□□□□ -1.89
EXOSC1-203ENST00000370886 KRTAP6-1Q3LI64 71 aa3.22□□□□□ -1.89
EXOSC1-203ENST00000370886 KRTAP5-8O75690 187 aa3.19□□□□□ -1.9
EXOSC1-203ENST00000370886 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
EXOSC1-203ENST00000370886 KRTAP5-2Q701N4 177 aa3.13□□□□□ -1.91
EXOSC1-203ENST00000370886 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
EXOSC1-203ENST00000370886 KRTAP6-2Q3LI66 62 aa3.05□□□□□ -1.92
EXOSC1-203ENST00000370886 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
EXOSC1-203ENST00000370886 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
EXOSC1-203ENST00000370886 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
EXOSC1-203ENST00000370886 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
EXOSC1-203ENST00000370886 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
EXOSC1-203ENST00000370886 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
EXOSC1-203ENST00000370886 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
EXOSC1-203ENST00000370886 LCE1CQ5T751 118 aa2.45□□□□□ -2.02
EXOSC1-203ENST00000370886 PHGR1C9JFL3 82 aa2.28□□□□□ -2.04
EXOSC1-203ENST00000370886 PRM1P04553 51 aa2.18□□□□□ -2.06
EXOSC1-203ENST00000370886 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
EXOSC1-203ENST00000370886 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
EXOSC1-203ENST00000370886 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
EXOSC1-203ENST00000370886 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 85 ms