RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 KRTAP2-3P0C7H8 128 aa4.42□□□□□ -1.7
GPC3-201ENST00000370818 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
GPC3-201ENST00000370818 KRTAP2-4Q9BYR9 128 aa4.42□□□□□ -1.7
GPC3-201ENST00000370818 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
GPC3-201ENST00000370818 MUC12Q9UKN1 5478 aa4.37□□□□□ -1.71
GPC3-201ENST00000370818 KRTAP9-2Q9BYQ4 174 aa4.37□□□□□ -1.71
GPC3-201ENST00000370818 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
GPC3-201ENST00000370818 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
GPC3-201ENST00000370818 SPRR2FQ96RM1 72 aa4.26□□□□□ -1.73
GPC3-201ENST00000370818 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
GPC3-201ENST00000370818 MT1GP13640 62 aa4.26□□□□□ -1.73
GPC3-201ENST00000370818 MT1MQ8N339 61 aa4.25□□□□□ -1.73
GPC3-201ENST00000370818 CRCT1Q9UGL9 99 aa4.25□□□□□ -1.73
GPC3-201ENST00000370818 LCE5AQ5TCM9 118 aa4.2□□□□□ -1.74
GPC3-201ENST00000370818 SYNE2Q8WXH0 6885 aaKnown RBP4.16□□□□□ -1.74
GPC3-201ENST00000370818 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.75
GPC3-201ENST00000370818 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.14□□□□□ -1.75
GPC3-201ENST00000370818 MDN1Q9NU22 5596 aa4.12□□□□□ -1.75
GPC3-201ENST00000370818 KRTAP5-9P26371 169 aa4.11□□□□□ -1.75
GPC3-201ENST00000370818 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
GPC3-201ENST00000370818 DSTQ03001 7570 aaKnown RBP4.07□□□□□ -1.76
GPC3-201ENST00000370818 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
GPC3-201ENST00000370818 KRTAP12-4P60329 112 aa4.03□□□□□ -1.77
GPC3-201ENST00000370818 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
GPC3-201ENST00000370818 KRTAP9-9Q9BYP9 154 aa3.96□□□□□ -1.78
GPC3-201ENST00000370818 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
GPC3-201ENST00000370818 SPRR2EP22531 72 aa3.95□□□□□ -1.78
GPC3-201ENST00000370818 SPRR2BP35325 72 aa3.95□□□□□ -1.78
GPC3-201ENST00000370818 SPRR2AP35326 72 aa3.95□□□□□ -1.78
GPC3-201ENST00000370818 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
GPC3-201ENST00000370818 KRTAP6-3Q3LI67 103 aa3.89□□□□□ -1.79
GPC3-201ENST00000370818 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
GPC3-201ENST00000370818 KRTAP4-9Q9BYQ8 210 aa3.82□□□□□ -1.8
GPC3-201ENST00000370818 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
GPC3-201ENST00000370818 SPRR2DP22532 72 aa3.79□□□□□ -1.8
GPC3-201ENST00000370818 MT1AP04731 61 aa3.78□□□□□ -1.8
GPC3-201ENST00000370818 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
GPC3-201ENST00000370818 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
GPC3-201ENST00000370818 NEBP20929 6669 aa3.62□□□□□ -1.83
GPC3-201ENST00000370818 KRTAP9-7A8MTY7 169 aa3.61□□□□□ -1.83
GPC3-201ENST00000370818 PRM1P04553 51 aa3.61□□□□□ -1.83
GPC3-201ENST00000370818 KRTAP4-11Q9BYQ6 195 aa3.59□□□□□ -1.83
GPC3-201ENST00000370818 KRTAP5-3Q6L8H2 238 aa3.58□□□□□ -1.84
GPC3-201ENST00000370818 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
GPC3-201ENST00000370818 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
GPC3-201ENST00000370818 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
GPC3-201ENST00000370818 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
GPC3-201ENST00000370818 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
GPC3-201ENST00000370818 MT3P25713 68 aa3.41□□□□□ -1.86
GPC3-201ENST00000370818 MT4P47944 62 aa3.33□□□□□ -1.88
GPC3-201ENST00000370818 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
GPC3-201ENST00000370818 KRTAP20-2Q3LI61 65 aa3.27□□□□□ -1.89
GPC3-201ENST00000370818 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
GPC3-201ENST00000370818 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
GPC3-201ENST00000370818 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
GPC3-201ENST00000370818 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
GPC3-201ENST00000370818 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
GPC3-201ENST00000370818 MUC5ACP98088 5654 aa2.85□□□□□ -1.95
GPC3-201ENST00000370818 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.96
GPC3-201ENST00000370818 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
GPC3-201ENST00000370818 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
GPC3-201ENST00000370818 LCE1CQ5T751 118 aa2.71□□□□□ -1.98
GPC3-201ENST00000370818 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
GPC3-201ENST00000370818 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
GPC3-201ENST00000370818 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
GPC3-201ENST00000370818 KRTAP5-7Q6L8G8 165 aa2.61□□□□□ -1.99
GPC3-201ENST00000370818 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
GPC3-201ENST00000370818 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
GPC3-201ENST00000370818 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
GPC3-201ENST00000370818 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.03
GPC3-201ENST00000370818 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
GPC3-201ENST00000370818 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
GPC3-201ENST00000370818 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
GPC3-201ENST00000370818 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
GPC3-201ENST00000370818 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
GPC3-201ENST00000370818 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.1
GPC3-201ENST00000370818 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 58.9 ms