RNA–Protein interactions for RNA: ENST00000370110.5

NPM3-201, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM3, Length 877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-201ENST00000370110 GPR98Q8WXG9 6306 aa7.28□□□□□ -1.24
NPM3-201ENST00000370110 TNP1P09430 55 aa7.25□□□□□ -1.25
NPM3-201ENST00000370110 CDC42SE1Q9NRR8 79 aa7.24□□□□□ -1.25
NPM3-201ENST00000370110 DSTQ03001 7570 aaKnown RBP7.13□□□□□ -1.27
NPM3-201ENST00000370110 LCE3AQ5TA76 89 aa7.04□□□□□ -1.28
NPM3-201ENST00000370110 KRTAP4-9Q9BYQ8 210 aa7.03□□□□□ -1.28
NPM3-201ENST00000370110 KRTAP25-1Q3LHN0 102 aa7□□□□□ -1.29
NPM3-201ENST00000370110 KRTAP19-5Q3LI72 72 aa6.99□□□□□ -1.29
NPM3-201ENST00000370110 KRTAP19-7Q3SYF9 63 aa6.99□□□□□ -1.29
NPM3-201ENST00000370110 MT1EP04732 61 aa6.94□□□□□ -1.3
NPM3-201ENST00000370110 LCE5AQ5TCM9 118 aa6.93□□□□□ -1.3
NPM3-201ENST00000370110 ROMO1P60602 79 aa6.89□□□□□ -1.31
NPM3-201ENST00000370110 A0A0A0MQY5 61 aa6.88□□□□□ -1.31
NPM3-201ENST00000370110 KRTAP19-3Q7Z4W3 81 aa6.84□□□□□ -1.31
NPM3-201ENST00000370110 PRAC1Q96KF2 57 aa6.82□□□□□ -1.32
NPM3-201ENST00000370110 LOC100996750A0A140TA64 210 aa6.8□□□□□ -1.32
NPM3-201ENST00000370110 LCE1DQ5T752 114 aa6.8□□□□□ -1.32
NPM3-201ENST00000370110 KRTAP4-6Q9BYQ5 205 aa6.8□□□□□ -1.32
NPM3-201ENST00000370110 KRTAP12-3P60328 96 aa6.77□□□□□ -1.33
NPM3-201ENST00000370110 MT1GP13640 62 aa6.7□□□□□ -1.34
NPM3-201ENST00000370110 MT1LQ93083 61 aa6.7□□□□□ -1.34
NPM3-201ENST00000370110 HMCN1Q96RW7 5635 aa6.7□□□□□ -1.34
NPM3-201ENST00000370110 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
NPM3-201ENST00000370110 PP632Q6XCG6 107 aa6.69□□□□□ -1.34
NPM3-201ENST00000370110 MT4P47944 62 aa6.67□□□□□ -1.34
NPM3-201ENST00000370110 LCE4AQ5TA78 99 aa6.62□□□□□ -1.35
NPM3-201ENST00000370110 AHNAK2Q8IVF2 5795 aa6.61□□□□□ -1.35
NPM3-201ENST00000370110 MT1MQ8N339 61 aa6.59□□□□□ -1.35
NPM3-201ENST00000370110 KRTAP5-10Q6L8G5 202 aa6.53□□□□□ -1.36
NPM3-201ENST00000370110 KRTAP5-4Q6L8H1 288 aa6.48□□□□□ -1.37
NPM3-201ENST00000370110 KRTAP4-3Q9BYR4 195 aa6.47□□□□□ -1.37
NPM3-201ENST00000370110 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.38
NPM3-201ENST00000370110 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
NPM3-201ENST00000370110 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
NPM3-201ENST00000370110 KRTAP5-7Q6L8G8 165 aa6.31□□□□□ -1.4
NPM3-201ENST00000370110 KRTAP5-3Q6L8H2 238 aa6.28□□□□□ -1.4
NPM3-201ENST00000370110 LCE3CQ5T5A8 94 aa6.26□□□□□ -1.41
NPM3-201ENST00000370110 LUZP6Q538Z0 58 aa6.16□□□□□ -1.42
NPM3-201ENST00000370110 KRTAP20-2Q3LI61 65 aa6.14□□□□□ -1.43
NPM3-201ENST00000370110 NDUFAF8A1L188 74 aa6.13□□□□□ -1.43
NPM3-201ENST00000370110 KRTAP5-5Q701N2 237 aaPredicted RBP6.05□□□□□ -1.44
NPM3-201ENST00000370110 SPRR5A0A1B0GTR4 108 aa6.01□□□□□ -1.45
NPM3-201ENST00000370110 SYNE1Q8NF91 8797 aaKnown RBP5.95□□□□□ -1.46
NPM3-201ENST00000370110 KRTAP12-4P60329 112 aa5.91□□□□□ -1.46
NPM3-201ENST00000370110 KRTAP4-12Q9BQ66 201 aa5.9□□□□□ -1.46
NPM3-201ENST00000370110 KRTAP9-6A8MVA2 160 aa5.83□□□□□ -1.48
NPM3-201ENST00000370110 KRTAP9-9Q9BYP9 154 aa5.81□□□□□ -1.48
NPM3-201ENST00000370110 KRTAP9-4Q9BYQ2 154 aa5.81□□□□□ -1.48
NPM3-201ENST00000370110 MT1AP04731 61 aa5.71□□□□□ -1.5
NPM3-201ENST00000370110 KRTAP4-11Q9BYQ6 195 aa5.7□□□□□ -1.5
NPM3-201ENST00000370110 KRTAP6-1Q3LI64 71 aa5.66□□□□□ -1.5
NPM3-201ENST00000370110 KRTAP5-2Q701N4 177 aa5.61□□□□□ -1.51
NPM3-201ENST00000370110 KRTAP5-8O75690 187 aa5.54□□□□□ -1.52
NPM3-201ENST00000370110 AHNAKQ09666 5890 aaKnown RBP5.52□□□□□ -1.53
NPM3-201ENST00000370110 MUC5ACP98088 5654 aa5.5□□□□□ -1.53
NPM3-201ENST00000370110 MUC5BQ9HC84 5762 aaPredicted RBP5.48□□□□□ -1.53
NPM3-201ENST00000370110 OBSCNQ5VST9 7968 aa5.43□□□□□ -1.54
NPM3-201ENST00000370110 KRTAP6-2Q3LI66 62 aa5.35□□□□□ -1.55
NPM3-201ENST00000370110 KRTAP4-2Q9BYR5 136 aa5.32□□□□□ -1.56
NPM3-201ENST00000370110 INE1O15225 51 aa5.27□□□□□ -1.57
NPM3-201ENST00000370110 MT3P25713 68 aa5.24□□□□□ -1.57
NPM3-201ENST00000370110 KRTAP5-1Q6L8H4 278 aa5.11□□□□□ -1.59
NPM3-201ENST00000370110 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
NPM3-201ENST00000370110 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
NPM3-201ENST00000370110 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
NPM3-201ENST00000370110 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
NPM3-201ENST00000370110 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
NPM3-201ENST00000370110 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
NPM3-201ENST00000370110 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
NPM3-201ENST00000370110 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
NPM3-201ENST00000370110 PHGR1C9JFL3 82 aa3.8□□□□□ -1.8
NPM3-201ENST00000370110 KRTAP21-2Q3LI59 83 aa3.68□□□□□ -1.82
NPM3-201ENST00000370110 PRM1P04553 51 aa3.56□□□□□ -1.84
NPM3-201ENST00000370110 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
NPM3-201ENST00000370110 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
NPM3-201ENST00000370110 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
NPM3-201ENST00000370110 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 64.7 ms