RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 MT1EP04732 61 aa5.29□□□□□ -1.56
CHD1L-203ENST00000369259 CRCT1Q9UGL9 99 aa5.29□□□□□ -1.56
CHD1L-203ENST00000369259 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
CHD1L-203ENST00000369259 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.58
CHD1L-203ENST00000369259 SSPOA2VEC9 5147 aa5.08□□□□□ -1.6
CHD1L-203ENST00000369259 MT1GP13640 62 aa5.07□□□□□ -1.6
CHD1L-203ENST00000369259 KRTAP4-3Q9BYR4 195 aa5.06□□□□□ -1.6
CHD1L-203ENST00000369259 FCGBPQ9Y6R7 5405 aaPredicted RBP4.97□□□□□ -1.61
CHD1L-203ENST00000369259 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.92□□□□□ -1.62
CHD1L-203ENST00000369259 MT1MQ8N339 61 aa4.91□□□□□ -1.62
CHD1L-203ENST00000369259 MACF1Q9UPN3 7388 aaKnown RBP4.86□□□□□ -1.63
CHD1L-203ENST00000369259 KRTAP9-7A8MTY7 169 aa4.86□□□□□ -1.63
CHD1L-203ENST00000369259 KRTAP19-6Q3LI70 58 aa4.86□□□□□ -1.63
CHD1L-203ENST00000369259 SYNE2Q8WXH0 6885 aaKnown RBP4.85□□□□□ -1.63
CHD1L-203ENST00000369259 KRTAP19-3Q7Z4W3 81 aa4.84□□□□□ -1.64
CHD1L-203ENST00000369259 LCE3BQ5TA77 95 aa4.82□□□□□ -1.64
CHD1L-203ENST00000369259 KRTAP4-9Q9BYQ8 210 aa4.81□□□□□ -1.64
CHD1L-203ENST00000369259 MT1AP04731 61 aa4.8□□□□□ -1.64
CHD1L-203ENST00000369259 PRM1P04553 51 aa4.72□□□□□ -1.65
CHD1L-203ENST00000369259 LCE3DQ9BYE3 92 aa4.7□□□□□ -1.66
CHD1L-203ENST00000369259 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
CHD1L-203ENST00000369259 LCE3EQ5T5B0 92 aa4.69□□□□□ -1.66
CHD1L-203ENST00000369259 MUC12Q9UKN1 5478 aa4.67□□□□□ -1.66
CHD1L-203ENST00000369259 SYNE1Q8NF91 8797 aaKnown RBP4.65□□□□□ -1.67
CHD1L-203ENST00000369259 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
CHD1L-203ENST00000369259 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
CHD1L-203ENST00000369259 KRTAP6-1Q3LI64 71 aa4.57□□□□□ -1.68
CHD1L-203ENST00000369259 DSTQ03001 7570 aaKnown RBP4.53□□□□□ -1.68
CHD1L-203ENST00000369259 NEBP20929 6669 aa4.46□□□□□ -1.7
CHD1L-203ENST00000369259 KRTAP6-2Q3LI66 62 aa4.42□□□□□ -1.7
CHD1L-203ENST00000369259 SPRR2FQ96RM1 72 aa4.4□□□□□ -1.71
CHD1L-203ENST00000369259 MDN1Q9NU22 5596 aa4.4□□□□□ -1.71
CHD1L-203ENST00000369259 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
CHD1L-203ENST00000369259 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
CHD1L-203ENST00000369259 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
CHD1L-203ENST00000369259 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
CHD1L-203ENST00000369259 SPRR2EP22531 72 aa4.19□□□□□ -1.74
CHD1L-203ENST00000369259 SPRR2BP35325 72 aa4.19□□□□□ -1.74
CHD1L-203ENST00000369259 SPRR2AP35326 72 aa4.19□□□□□ -1.74
CHD1L-203ENST00000369259 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
CHD1L-203ENST00000369259 SPRR2DP22532 72 aa4.05□□□□□ -1.76
CHD1L-203ENST00000369259 MT3P25713 68 aa4.02□□□□□ -1.77
CHD1L-203ENST00000369259 OBSCNQ5VST9 7968 aa3.92□□□□□ -1.78
CHD1L-203ENST00000369259 LCE1EQ5T753 118 aa3.9□□□□□ -1.78
CHD1L-203ENST00000369259 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
CHD1L-203ENST00000369259 GPR98Q8WXG9 6306 aa3.59□□□□□ -1.84
CHD1L-203ENST00000369259 KRTAP5-4Q6L8H1 288 aa3.58□□□□□ -1.84
CHD1L-203ENST00000369259 MT4P47944 62 aa3.57□□□□□ -1.84
CHD1L-203ENST00000369259 HMCN1Q96RW7 5635 aa3.57□□□□□ -1.84
CHD1L-203ENST00000369259 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
CHD1L-203ENST00000369259 KRTAP4-11Q9BYQ6 195 aa3.51□□□□□ -1.85
CHD1L-203ENST00000369259 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
CHD1L-203ENST00000369259 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
CHD1L-203ENST00000369259 AHNAK2Q8IVF2 5795 aa3.38□□□□□ -1.87
CHD1L-203ENST00000369259 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
CHD1L-203ENST00000369259 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
CHD1L-203ENST00000369259 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
CHD1L-203ENST00000369259 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
CHD1L-203ENST00000369259 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
CHD1L-203ENST00000369259 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
CHD1L-203ENST00000369259 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
CHD1L-203ENST00000369259 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
CHD1L-203ENST00000369259 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
CHD1L-203ENST00000369259 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
CHD1L-203ENST00000369259 KRTAP4-2Q9BYR5 136 aa2.97□□□□□ -1.93
CHD1L-203ENST00000369259 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
CHD1L-203ENST00000369259 KRTAP5-8O75690 187 aa2.93□□□□□ -1.94
CHD1L-203ENST00000369259 KRTAP21-2Q3LI59 83 aa2.93□□□□□ -1.94
CHD1L-203ENST00000369259 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
CHD1L-203ENST00000369259 MUC5BQ9HC84 5762 aaPredicted RBP2.83□□□□□ -1.96
CHD1L-203ENST00000369259 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
CHD1L-203ENST00000369259 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
CHD1L-203ENST00000369259 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
CHD1L-203ENST00000369259 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
CHD1L-203ENST00000369259 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
CHD1L-203ENST00000369259 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
CHD1L-203ENST00000369259 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 53.9 ms