RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
ECHDC1-202ENST00000368289 KRTAP25-1Q3LHN0 102 aa3.21□□□□□ -1.9
ECHDC1-202ENST00000368289 ADM2Q7Z4H4 148 aa3.21□□□□□ -1.9
ECHDC1-202ENST00000368289 M0QZ58 72 aa3.19□□□□□ -1.9
ECHDC1-202ENST00000368289 ROMO1P60602 79 aa3.19□□□□□ -1.9
ECHDC1-202ENST00000368289 MT2AP02795 61 aa3.14□□□□□ -1.91
ECHDC1-202ENST00000368289 MT1FP04733 61 aa3.13□□□□□ -1.91
ECHDC1-202ENST00000368289 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
ECHDC1-202ENST00000368289 CRIPTQ9P021 101 aa3.1□□□□□ -1.91
ECHDC1-202ENST00000368289 DSTQ03001 7570 aaKnown RBP3.1□□□□□ -1.91
ECHDC1-202ENST00000368289 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.91
ECHDC1-202ENST00000368289 P0C880 135 aa3.08□□□□□ -1.92
ECHDC1-202ENST00000368289 KRTAP13-4Q3LI77 160 aa3.08□□□□□ -1.92
ECHDC1-202ENST00000368289 A0A0D9SG42 100 aa3.06□□□□□ -1.92
ECHDC1-202ENST00000368289 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
ECHDC1-202ENST00000368289 KRTAP12-2P59991 146 aa3.05□□□□□ -1.92
ECHDC1-202ENST00000368289 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
ECHDC1-202ENST00000368289 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
ECHDC1-202ENST00000368289 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.92
ECHDC1-202ENST00000368289 SPINT4Q6UDR6 99 aa3.02□□□□□ -1.93
ECHDC1-202ENST00000368289 R4GN34 69 aa3.01□□□□□ -1.93
ECHDC1-202ENST00000368289 KRTAP10-10P60014 251 aa2.97□□□□□ -1.93
ECHDC1-202ENST00000368289 PP632Q6XCG6 107 aa2.96□□□□□ -1.94
ECHDC1-202ENST00000368289 SPRR2EP22531 72 aa2.89□□□□□ -1.95
ECHDC1-202ENST00000368289 SPRR2BP35325 72 aa2.89□□□□□ -1.95
ECHDC1-202ENST00000368289 SPRR2AP35326 72 aa2.89□□□□□ -1.95
ECHDC1-202ENST00000368289 C10orf95Q9H7T3 257 aa2.89□□□□□ -1.95
ECHDC1-202ENST00000368289 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
ECHDC1-202ENST00000368289 KRTAP5-1Q6L8H4 278 aa2.84□□□□□ -1.95
ECHDC1-202ENST00000368289 PRO2289Q9P1D8 64 aa2.84□□□□□ -1.95
ECHDC1-202ENST00000368289 PLAC4Q8WY50 150 aa2.83□□□□□ -1.96
ECHDC1-202ENST00000368289 TNP1P09430 55 aa2.81□□□□□ -1.96
ECHDC1-202ENST00000368289 SPRR2DP22532 72 aa2.8□□□□□ -1.96
ECHDC1-202ENST00000368289 SPRR2FQ96RM1 72 aa2.8□□□□□ -1.96
ECHDC1-202ENST00000368289 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
ECHDC1-202ENST00000368289 SPRR2GQ9BYE4 73 aa2.76□□□□□ -1.97
ECHDC1-202ENST00000368289 LCE3AQ5TA76 89 aa2.75□□□□□ -1.97
ECHDC1-202ENST00000368289 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
ECHDC1-202ENST00000368289 MT1BP07438 61 aa2.72□□□□□ -1.97
ECHDC1-202ENST00000368289 SPRR5A0A1B0GTR4 108 aa2.69□□□□□ -1.98
ECHDC1-202ENST00000368289 KRTAP5-4Q6L8H1 288 aa2.69□□□□□ -1.98
ECHDC1-202ENST00000368289 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
ECHDC1-202ENST00000368289 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.99
ECHDC1-202ENST00000368289 KRTAP19-8Q3LI54 63 aa2.64□□□□□ -1.99
ECHDC1-202ENST00000368289 INE1O15225 51 aa2.6□□□□□ -1.99
ECHDC1-202ENST00000368289 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
ECHDC1-202ENST00000368289 KRTAP8-1Q8IUC2 63 aa2.58□□□□□ -2
ECHDC1-202ENST00000368289 MT4P47944 62 aa2.54□□□□□ -2
ECHDC1-202ENST00000368289 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
ECHDC1-202ENST00000368289 KRTAP5-5Q701N2 237 aaPredicted RBP2.5□□□□□ -2.01
ECHDC1-202ENST00000368289 MT1XP80297 61 aa2.49□□□□□ -2.01
ECHDC1-202ENST00000368289 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
ECHDC1-202ENST00000368289 KRTAP4-3Q9BYR4 195 aa2.46□□□□□ -2.02
ECHDC1-202ENST00000368289 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
ECHDC1-202ENST00000368289 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
ECHDC1-202ENST00000368289 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
ECHDC1-202ENST00000368289 KRTAP19-5Q3LI72 72 aa2.3□□□□□ -2.04
ECHDC1-202ENST00000368289 SYNE1Q8NF91 8797 aaKnown RBP2.26□□□□□ -2.05
ECHDC1-202ENST00000368289 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
ECHDC1-202ENST00000368289 KRTAP5-8O75690 187 aa2.24□□□□□ -2.05
ECHDC1-202ENST00000368289 KRTAP19-7Q3SYF9 63 aa2.22□□□□□ -2.05
ECHDC1-202ENST00000368289 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
ECHDC1-202ENST00000368289 MT1EP04732 61 aa2.18□□□□□ -2.06
ECHDC1-202ENST00000368289 MT1LQ93083 61 aa2.18□□□□□ -2.06
ECHDC1-202ENST00000368289 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
ECHDC1-202ENST00000368289 MT1GP13640 62 aa2.12□□□□□ -2.07
ECHDC1-202ENST00000368289 MT1MQ8N339 61 aa2.07□□□□□ -2.08
ECHDC1-202ENST00000368289 KRTAP12-4P60329 112 aa1.95□□□□□ -2.1
ECHDC1-202ENST00000368289 MT1AP04731 61 aa1.94□□□□□ -2.1
ECHDC1-202ENST00000368289 MUC19Q7Z5P9 8384 aa1.81□□□□□ -2.12
ECHDC1-202ENST00000368289 KRTAP6-1Q3LI64 71 aa1.79□□□□□ -2.12
ECHDC1-202ENST00000368289 KRTAP6-2Q3LI66 62 aa1.71□□□□□ -2.14
ECHDC1-202ENST00000368289 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
ECHDC1-202ENST00000368289 PRM1P04553 51 aa1.63□□□□□ -2.15
ECHDC1-202ENST00000368289 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
ECHDC1-202ENST00000368289 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
ECHDC1-202ENST00000368289 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 71.1 ms