RNA–Protein interactions for RNA: ENST00000367505.6

SHPRH-203, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SHPRH, Length 7,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-203ENST00000367505 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
SHPRH-203ENST00000367505 KRTAP19-7Q3SYF9 63 aa2.5□□□□□ -2.01
SHPRH-203ENST00000367505 PRM1P04553 51 aa2.48□□□□□ -2.01
SHPRH-203ENST00000367505 LOC100996750A0A140TA64 210 aa2.44□□□□□ -2.02
SHPRH-203ENST00000367505 MT1AP04731 61 aa2.43□□□□□ -2.02
SHPRH-203ENST00000367505 EPPK1P58107 5090 aaKnown RBP2.42□□□□□ -2.02
SHPRH-203ENST00000367505 LCE2DQ5TA82 110 aaPredicted RBP2.42□□□□□ -2.02
SHPRH-203ENST00000367505 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
SHPRH-203ENST00000367505 LCE2AQ5TA79 106 aaPredicted RBP2.39□□□□□ -2.03
SHPRH-203ENST00000367505 HMCN2Q8NDA2 5059 aa2.39□□□□□ -2.03
SHPRH-203ENST00000367505 ABCA13Q86UQ4 5058 aa2.39□□□□□ -2.03
SHPRH-203ENST00000367505 UBR4Q5T4S7 5183 aa2.34□□□□□ -2.03
SHPRH-203ENST00000367505 RNF213Q63HN8 5207 aa2.33□□□□□ -2.04
SHPRH-203ENST00000367505 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
SHPRH-203ENST00000367505 FAT4Q6V0I7 4981 aa2.32□□□□□ -2.04
SHPRH-203ENST00000367505 MT4P47944 62 aa2.29□□□□□ -2.04
SHPRH-203ENST00000367505 LCE1AQ5T7P2 110 aa2.29□□□□□ -2.04
SHPRH-203ENST00000367505 KRTAP4-9Q9BYQ8 210 aa2.28□□□□□ -2.05
SHPRH-203ENST00000367505 LCE1DQ5T752 114 aa2.27□□□□□ -2.05
SHPRH-203ENST00000367505 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
SHPRH-203ENST00000367505 LCE5AQ5TCM9 118 aa2.25□□□□□ -2.05
SHPRH-203ENST00000367505 KRTAP9-2Q9BYQ4 174 aa2.25□□□□□ -2.05
SHPRH-203ENST00000367505 OBSCNQ5VST9 7968 aa2.24□□□□□ -2.05
SHPRH-203ENST00000367505 KRTAP6-1Q3LI64 71 aa2.23□□□□□ -2.05
SHPRH-203ENST00000367505 KRTAP9-4Q9BYQ2 154 aa2.21□□□□□ -2.06
SHPRH-203ENST00000367505 KRTAP6-2Q3LI66 62 aa2.21□□□□□ -2.06
SHPRH-203ENST00000367505 MUC2Q02817 5179 aa2.18□□□□□ -2.06
SHPRH-203ENST00000367505 FSIP2Q5CZC0 6907 aa2.16□□□□□ -2.06
SHPRH-203ENST00000367505 KRTAP9-6A0A140TA67 174 aa2.14□□□□□ -2.07
SHPRH-203ENST00000367505 KRTAP6-3Q3LI67 103 aa2.13□□□□□ -2.07
SHPRH-203ENST00000367505 LCE4AQ5TA78 99 aa2.12□□□□□ -2.07
SHPRH-203ENST00000367505 KRTAP9-7A8MTY7 169 aa2.11□□□□□ -2.07
SHPRH-203ENST00000367505 SYNE2Q8WXH0 6885 aaKnown RBP2.1□□□□□ -2.07
SHPRH-203ENST00000367505 KRTAP20-1Q3LI63 56 aa2.03□□□□□ -2.08
SHPRH-203ENST00000367505 KRTAP2-2Q9BYT5 123 aa2.02□□□□□ -2.09
SHPRH-203ENST00000367505 FCGBPQ9Y6R7 5405 aaPredicted RBP2.02□□□□□ -2.09
SHPRH-203ENST00000367505 USH2AO75445 5202 aa1.98□□□□□ -2.09
SHPRH-203ENST00000367505 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.97□□□□□ -2.09
SHPRH-203ENST00000367505 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
SHPRH-203ENST00000367505 KRTAP5-9P26371 169 aa1.91□□□□□ -2.1
SHPRH-203ENST00000367505 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
SHPRH-203ENST00000367505 LCE1EQ5T753 118 aa1.87□□□□□ -2.11
SHPRH-203ENST00000367505 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
SHPRH-203ENST00000367505 KMT2DO14686 5537 aa1.86□□□□□ -2.11
SHPRH-203ENST00000367505 KRTAP4-11Q9BYQ6 195 aa1.8□□□□□ -2.12
SHPRH-203ENST00000367505 SSPOA2VEC9 5147 aa1.79□□□□□ -2.12
SHPRH-203ENST00000367505 KRTAP20-2Q3LI61 65 aa1.78□□□□□ -2.12
SHPRH-203ENST00000367505 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
SHPRH-203ENST00000367505 KRTAP5-5Q701N2 237 aaPredicted RBP1.76□□□□□ -2.13
SHPRH-203ENST00000367505 MACF1Q9UPN3 7388 aaKnown RBP1.76□□□□□ -2.13
SHPRH-203ENST00000367505 MUC12Q9UKN1 5478 aa1.76□□□□□ -2.13
SHPRH-203ENST00000367505 KRTAP9-9Q9BYP9 154 aa1.75□□□□□ -2.13
SHPRH-203ENST00000367505 KRTAP4-6Q9BYQ5 205 aa1.74□□□□□ -2.13
SHPRH-203ENST00000367505 NEBP20929 6669 aa1.69□□□□□ -2.14
SHPRH-203ENST00000367505 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
SHPRH-203ENST00000367505 KRTAP5-4Q6L8H1 288 aa1.66□□□□□ -2.14
SHPRH-203ENST00000367505 KRTAP4-4Q9BYR3 166 aa1.55□□□□□ -2.16
SHPRH-203ENST00000367505 KRTAP4-12Q9BQ66 201 aa1.49□□□□□ -2.17
SHPRH-203ENST00000367505 KRTAP4-2Q9BYR5 136 aa1.49□□□□□ -2.17
SHPRH-203ENST00000367505 GPR98Q8WXG9 6306 aa1.49□□□□□ -2.17
SHPRH-203ENST00000367505 KRTAP5-3Q6L8H2 238 aa1.45□□□□□ -2.18
SHPRH-203ENST00000367505 MUC5ACP98088 5654 aa1.44□□□□□ -2.18
SHPRH-203ENST00000367505 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
SHPRH-203ENST00000367505 MUC5BQ9HC84 5762 aaPredicted RBP1.38□□□□□ -2.19
SHPRH-203ENST00000367505 KRTAP5-2Q701N4 177 aa1.38□□□□□ -2.19
SHPRH-203ENST00000367505 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
SHPRH-203ENST00000367505 AHNAK2Q8IVF2 5795 aa1.31□□□□□ -2.2
SHPRH-203ENST00000367505 KRTAP5-8O75690 187 aa1.26□□□□□ -2.21
SHPRH-203ENST00000367505 KRTAP5-11Q6L8G4 156 aa1.25□□□□□ -2.21
SHPRH-203ENST00000367505 KRTAP5-1Q6L8H4 278 aa1.2□□□□□ -2.22
SHPRH-203ENST00000367505 KRTAP21-2Q3LI59 83 aa1.18□□□□□ -2.22
SHPRH-203ENST00000367505 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.16□□□□□ -2.22
SHPRH-203ENST00000367505 KRTAP21-1Q3LI58 79 aa1.16□□□□□ -2.22
SHPRH-203ENST00000367505 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
SHPRH-203ENST00000367505 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
SHPRH-203ENST00000367505 KRTAP5-7Q6L8G8 165 aa1.05□□□□□ -2.24
SHPRH-203ENST00000367505 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 8.9 ms