RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 KRTAP9-2Q9BYQ4 174 aa3.31□□□□□ -1.88
TPR-201ENST00000367478 RYR3Q15413 4870 aa3.31□□□□□ -1.88
TPR-201ENST00000367478 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
TPR-201ENST00000367478 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
TPR-201ENST00000367478 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
TPR-201ENST00000367478 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
TPR-201ENST00000367478 LRP2P98164 4655 aa3.29□□□□□ -1.88
TPR-201ENST00000367478 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
TPR-201ENST00000367478 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.89
TPR-201ENST00000367478 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
TPR-201ENST00000367478 LPAP08519 4548 aa3.23□□□□□ -1.89
TPR-201ENST00000367478 MUC17Q685J3 4493 aa3.22□□□□□ -1.89
TPR-201ENST00000367478 KRTAP6-1Q3LI64 71 aa3.17□□□□□ -1.9
TPR-201ENST00000367478 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
TPR-201ENST00000367478 SYNE2Q8WXH0 6885 aaKnown RBP3.16□□□□□ -1.9
TPR-201ENST00000367478 KMT2CQ8NEZ4 4911 aaKnown RBP3.15□□□□□ -1.91
TPR-201ENST00000367478 KRTAP9-6A0A140TA67 174 aa3.12□□□□□ -1.91
TPR-201ENST00000367478 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
TPR-201ENST00000367478 HERC2O95714 4834 aa3.1□□□□□ -1.91
TPR-201ENST00000367478 KRTAP6-3Q3LI67 103 aa3.09□□□□□ -1.91
TPR-201ENST00000367478 KRTAP9-7A8MTY7 169 aa3.05□□□□□ -1.92
TPR-201ENST00000367478 LCE2AQ5TA79 106 aaPredicted RBP3.01□□□□□ -1.93
TPR-201ENST00000367478 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
TPR-201ENST00000367478 PCLOQ9Y6V0 5065 aa3□□□□□ -1.93
TPR-201ENST00000367478 RYR2Q92736 4967 aa3□□□□□ -1.93
TPR-201ENST00000367478 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
TPR-201ENST00000367478 BIRC6Q9NR09 4857 aa2.93□□□□□ -1.94
TPR-201ENST00000367478 HERC1Q15751 4861 aa2.86□□□□□ -1.95
TPR-201ENST00000367478 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.82□□□□□ -1.96
TPR-201ENST00000367478 HMCN2Q8NDA2 5059 aa2.8□□□□□ -1.96
TPR-201ENST00000367478 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
TPR-201ENST00000367478 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
TPR-201ENST00000367478 KIAA1109Q2LD37 5005 aa2.74□□□□□ -1.97
TPR-201ENST00000367478 FSIP2Q5CZC0 6907 aa2.73□□□□□ -1.97
TPR-201ENST00000367478 EPPK1P58107 5090 aaKnown RBP2.73□□□□□ -1.97
TPR-201ENST00000367478 HYDINQ4G0P3 5121 aa2.67□□□□□ -1.98
TPR-201ENST00000367478 KRTAP20-2Q3LI61 65 aa2.6□□□□□ -1.99
TPR-201ENST00000367478 MUC2Q02817 5179 aa2.6□□□□□ -1.99
TPR-201ENST00000367478 RNF213Q63HN8 5207 aa2.49□□□□□ -2.01
TPR-201ENST00000367478 UBR4Q5T4S7 5183 aa2.49□□□□□ -2.01
TPR-201ENST00000367478 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
TPR-201ENST00000367478 KRTAP4-6Q9BYQ5 205 aa2.44□□□□□ -2.02
TPR-201ENST00000367478 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
TPR-201ENST00000367478 FAT4Q6V0I7 4981 aa2.4□□□□□ -2.03
TPR-201ENST00000367478 DSTQ03001 7570 aaKnown RBP2.4□□□□□ -2.03
TPR-201ENST00000367478 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
TPR-201ENST00000367478 MACF1Q9UPN3 7388 aaKnown RBP2.35□□□□□ -2.03
TPR-201ENST00000367478 KRTAP4-12Q9BQ66 201 aa2.3□□□□□ -2.04
TPR-201ENST00000367478 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
TPR-201ENST00000367478 FCGBPQ9Y6R7 5405 aaPredicted RBP2.3□□□□□ -2.04
TPR-201ENST00000367478 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
TPR-201ENST00000367478 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
TPR-201ENST00000367478 NEBP20929 6669 aa2.26□□□□□ -2.05
TPR-201ENST00000367478 ABCA13Q86UQ4 5058 aa2.2□□□□□ -2.06
TPR-201ENST00000367478 MDN1Q9NU22 5596 aa2.18□□□□□ -2.06
TPR-201ENST00000367478 KMT2DO14686 5537 aa2.13□□□□□ -2.07
TPR-201ENST00000367478 USH2AO75445 5202 aa2.08□□□□□ -2.08
TPR-201ENST00000367478 KRTAP5-3Q6L8H2 238 aa2.05□□□□□ -2.08
TPR-201ENST00000367478 GPR98Q8WXG9 6306 aa1.97□□□□□ -2.09
TPR-201ENST00000367478 MUC5ACP98088 5654 aa1.96□□□□□ -2.1
TPR-201ENST00000367478 MUC12Q9UKN1 5478 aa1.92□□□□□ -2.1
TPR-201ENST00000367478 SSPOA2VEC9 5147 aa1.89□□□□□ -2.11
TPR-201ENST00000367478 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
TPR-201ENST00000367478 PHGR1C9JFL3 82 aa1.84□□□□□ -2.12
TPR-201ENST00000367478 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
TPR-201ENST00000367478 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
TPR-201ENST00000367478 KRTAP5-2Q701N4 177 aa1.72□□□□□ -2.13
TPR-201ENST00000367478 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
TPR-201ENST00000367478 HMCN1Q96RW7 5635 aa1.65□□□□□ -2.14
TPR-201ENST00000367478 AHNAK2Q8IVF2 5795 aa1.6□□□□□ -2.15
TPR-201ENST00000367478 KRTAP5-1Q6L8H4 278 aa1.6□□□□□ -2.15
TPR-201ENST00000367478 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
TPR-201ENST00000367478 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
TPR-201ENST00000367478 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
TPR-201ENST00000367478 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.43□□□□□ -2.18
TPR-201ENST00000367478 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
TPR-201ENST00000367478 KRTAP5-7Q6L8G8 165 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 432.7 ms