RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 PP632Q6XCG6 107 aa5.42□□□□□ -1.54
CTSD-202ENST00000367196 MT1GP13640 62 aa5.41□□□□□ -1.54
CTSD-202ENST00000367196 CDC42SE1Q9NRR8 79 aa5.41□□□□□ -1.54
CTSD-202ENST00000367196 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.54
CTSD-202ENST00000367196 A8MU10 97 aa5.38□□□□□ -1.55
CTSD-202ENST00000367196 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
CTSD-202ENST00000367196 KRTAP19-5Q3LI72 72 aa5.38□□□□□ -1.55
CTSD-202ENST00000367196 LCE4AQ5TA78 99 aa5.29□□□□□ -1.56
CTSD-202ENST00000367196 K7ERS5 55 aa5.28□□□□□ -1.56
CTSD-202ENST00000367196 LCE1DQ5T752 114 aa5.28□□□□□ -1.56
CTSD-202ENST00000367196 MT1MQ8N339 61 aa5.28□□□□□ -1.56
CTSD-202ENST00000367196 MT1LQ93083 61 aa5.26□□□□□ -1.57
CTSD-202ENST00000367196 TNP1P09430 55 aa5.25□□□□□ -1.57
CTSD-202ENST00000367196 PMAIP1Q13794 54 aa5.25□□□□□ -1.57
CTSD-202ENST00000367196 MT4P47944 62 aa5.22□□□□□ -1.57
CTSD-202ENST00000367196 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
CTSD-202ENST00000367196 LCE3AQ5TA76 89 aa5.19□□□□□ -1.58
CTSD-202ENST00000367196 HMCN1Q96RW7 5635 aa5.16□□□□□ -1.58
CTSD-202ENST00000367196 KRTAP5-4Q6L8H1 288 aa5.12□□□□□ -1.59
CTSD-202ENST00000367196 KTN1-AS1Q86SY8 53 aa5.11□□□□□ -1.59
CTSD-202ENST00000367196 KRTAP4-3Q9BYR4 195 aa5.09□□□□□ -1.59
CTSD-202ENST00000367196 KRTAP12-3P60328 96 aa5.03□□□□□ -1.6
CTSD-202ENST00000367196 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
CTSD-202ENST00000367196 ROMO1P60602 79 aa4.99□□□□□ -1.61
CTSD-202ENST00000367196 AHNAK2Q8IVF2 5795 aa4.98□□□□□ -1.61
CTSD-202ENST00000367196 KRTAP5-10Q6L8G5 202 aa4.98□□□□□ -1.61
CTSD-202ENST00000367196 KRTAP4-7Q9BYR0 210 aa4.93□□□□□ -1.62
CTSD-202ENST00000367196 KRTAP25-1Q3LHN0 102 aa4.91□□□□□ -1.62
CTSD-202ENST00000367196 KRTAP20-2Q3LI61 65 aa4.85□□□□□ -1.63
CTSD-202ENST00000367196 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
CTSD-202ENST00000367196 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
CTSD-202ENST00000367196 KRTAP5-5Q701N2 237 aaPredicted RBP4.84□□□□□ -1.63
CTSD-202ENST00000367196 KRTAP12-4P60329 112 aa4.83□□□□□ -1.64
CTSD-202ENST00000367196 KRTAP5-7Q6L8G8 165 aa4.83□□□□□ -1.64
CTSD-202ENST00000367196 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
CTSD-202ENST00000367196 PRAC1Q96KF2 57 aa4.82□□□□□ -1.64
CTSD-202ENST00000367196 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
CTSD-202ENST00000367196 LOC100996750A0A140TA64 210 aa4.69□□□□□ -1.66
CTSD-202ENST00000367196 SYNE1Q8NF91 8797 aaKnown RBP4.67□□□□□ -1.66
CTSD-202ENST00000367196 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.67
CTSD-202ENST00000367196 LCE3CQ5T5A8 94 aa4.6□□□□□ -1.67
CTSD-202ENST00000367196 MT1AP04731 61 aa4.49□□□□□ -1.69
CTSD-202ENST00000367196 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
CTSD-202ENST00000367196 KRTAP5-2Q701N4 177 aa4.46□□□□□ -1.7
CTSD-202ENST00000367196 KRTAP6-1Q3LI64 71 aa4.43□□□□□ -1.7
CTSD-202ENST00000367196 KRTAP9-4Q9BYQ2 154 aa4.34□□□□□ -1.71
CTSD-202ENST00000367196 KRTAP5-8O75690 187 aa4.3□□□□□ -1.72
CTSD-202ENST00000367196 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
CTSD-202ENST00000367196 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
CTSD-202ENST00000367196 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
CTSD-202ENST00000367196 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
CTSD-202ENST00000367196 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
CTSD-202ENST00000367196 MUC5BQ9HC84 5762 aaPredicted RBP4.15□□□□□ -1.75
CTSD-202ENST00000367196 MT3P25713 68 aa4.14□□□□□ -1.75
CTSD-202ENST00000367196 H3BS24 57 aa4.13□□□□□ -1.75
CTSD-202ENST00000367196 AHNAKQ09666 5890 aaKnown RBP4.11□□□□□ -1.75
CTSD-202ENST00000367196 LUZP6Q538Z0 58 aa4.06□□□□□ -1.76
CTSD-202ENST00000367196 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
CTSD-202ENST00000367196 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
CTSD-202ENST00000367196 LCE1EQ5T753 118 aa3.84□□□□□ -1.79
CTSD-202ENST00000367196 KRTAP4-12Q9BQ66 201 aa3.83□□□□□ -1.8
CTSD-202ENST00000367196 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
CTSD-202ENST00000367196 LCE1BQ5T7P3 118 aa3.6□□□□□ -1.83
CTSD-202ENST00000367196 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
CTSD-202ENST00000367196 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
CTSD-202ENST00000367196 INE1O15225 51 aa3.36□□□□□ -1.87
CTSD-202ENST00000367196 LCE3DQ9BYE3 92 aa3.31□□□□□ -1.88
CTSD-202ENST00000367196 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
CTSD-202ENST00000367196 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
CTSD-202ENST00000367196 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.22□□□□□ -1.89
CTSD-202ENST00000367196 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
CTSD-202ENST00000367196 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
CTSD-202ENST00000367196 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
CTSD-202ENST00000367196 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
CTSD-202ENST00000367196 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
CTSD-202ENST00000367196 PRM1P04553 51 aa2.58□□□□□ -2
CTSD-202ENST00000367196 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
CTSD-202ENST00000367196 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 77 ms