RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 SPTSSBQ8NFR3 76 aa3.37□□□□□ -1.87
YBX3-204ENST00000366290 PRO0628Q9UI54 55 aa3.36□□□□□ -1.87
YBX3-204ENST00000366290 ATP5EP56381 51 aaPredicted RBP3.34□□□□□ -1.87
YBX3-204ENST00000366290 TMEM258P61165 79 aa3.34□□□□□ -1.87
YBX3-204ENST00000366290 A6NN06 94 aa3.32□□□□□ -1.88
YBX3-204ENST00000366290 KRTAP20-1Q3LI63 56 aa3.3□□□□□ -1.88
YBX3-204ENST00000366290 KMT2DO14686 5537 aa3.28□□□□□ -1.88
YBX3-204ENST00000366290 M0QZ58 72 aa3.28□□□□□ -1.88
YBX3-204ENST00000366290 R4GN34 69 aa3.28□□□□□ -1.88
YBX3-204ENST00000366290 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
YBX3-204ENST00000366290 KRTAP13-4Q3LI77 160 aa3.27□□□□□ -1.89
YBX3-204ENST00000366290 SERP1Q9Y6X1 66 aa3.23□□□□□ -1.89
YBX3-204ENST00000366290 MT1XP80297 61 aa3.21□□□□□ -1.9
YBX3-204ENST00000366290 LINC01554Q52M75 96 aa3.21□□□□□ -1.9
YBX3-204ENST00000366290 A0A1B0GU69 56 aa3.2□□□□□ -1.9
YBX3-204ENST00000366290 PRO2289Q9P1D8 64 aa3.2□□□□□ -1.9
YBX3-204ENST00000366290 LINC01558Q9Y6Z2 57 aa3.2□□□□□ -1.9
YBX3-204ENST00000366290 A0A1B0GU33 70 aa3.19□□□□□ -1.9
YBX3-204ENST00000366290 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
YBX3-204ENST00000366290 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
YBX3-204ENST00000366290 SPATA8Q6RVD6 105 aa3.18□□□□□ -1.9
YBX3-204ENST00000366290 PLAC4Q8WY50 150 aa3.18□□□□□ -1.9
YBX3-204ENST00000366290 K7ERS5 55 aa3.15□□□□□ -1.91
YBX3-204ENST00000366290 PRR15LQ9BU68 103 aa3.13□□□□□ -1.91
YBX3-204ENST00000366290 A0A0D9SG42 100 aa3.12□□□□□ -1.91
YBX3-204ENST00000366290 RPS28P62857 69 aaKnown RBP3.12□□□□□ -1.91
YBX3-204ENST00000366290 Q1T7F1 81 aa3.12□□□□□ -1.91
YBX3-204ENST00000366290 KRTAP25-1Q3LHN0 102 aa3.12□□□□□ -1.91
YBX3-204ENST00000366290 KRTAP12-1P59990 96 aa3.11□□□□□ -1.91
YBX3-204ENST00000366290 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.91
YBX3-204ENST00000366290 SPRR2EP22531 72 aa3.08□□□□□ -1.92
YBX3-204ENST00000366290 SPRR2BP35325 72 aa3.08□□□□□ -1.92
YBX3-204ENST00000366290 SPRR2AP35326 72 aa3.08□□□□□ -1.92
YBX3-204ENST00000366290 KRTAP2-1Q9BYU5 128 aa3.08□□□□□ -1.92
YBX3-204ENST00000366290 KRTAP8-1Q8IUC2 63 aa3.06□□□□□ -1.92
YBX3-204ENST00000366290 UQCR11O14957 56 aa3.05□□□□□ -1.92
YBX3-204ENST00000366290 A6NED7 52 aa3.03□□□□□ -1.92
YBX3-204ENST00000366290 MIR22HGQ0VDD5 57 aa3.01□□□□□ -1.93
YBX3-204ENST00000366290 SPRR2DP22532 72 aa2.97□□□□□ -1.93
YBX3-204ENST00000366290 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
YBX3-204ENST00000366290 C10orf95Q9H7T3 257 aa2.96□□□□□ -1.94
YBX3-204ENST00000366290 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
YBX3-204ENST00000366290 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
YBX3-204ENST00000366290 CDC42SE1Q9NRR8 79 aa2.89□□□□□ -1.95
YBX3-204ENST00000366290 KRTAP12-3P60328 96 aa2.88□□□□□ -1.95
YBX3-204ENST00000366290 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
YBX3-204ENST00000366290 KRTAP19-7Q3SYF9 63 aa2.87□□□□□ -1.95
YBX3-204ENST00000366290 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
YBX3-204ENST00000366290 TNP1P09430 55 aa2.86□□□□□ -1.95
YBX3-204ENST00000366290 MT1EP04732 61 aa2.84□□□□□ -1.95
YBX3-204ENST00000366290 KRTAP19-3Q7Z4W3 81 aa2.81□□□□□ -1.96
YBX3-204ENST00000366290 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
YBX3-204ENST00000366290 ROMO1P60602 79 aa2.76□□□□□ -1.97
YBX3-204ENST00000366290 MT1GP13640 62 aa2.75□□□□□ -1.97
YBX3-204ENST00000366290 KRTAP12-4P60329 112 aa2.75□□□□□ -1.97
YBX3-204ENST00000366290 BRK1Q8WUW1 75 aa2.75□□□□□ -1.97
YBX3-204ENST00000366290 PMAIP1Q13794 54 aa2.73□□□□□ -1.97
YBX3-204ENST00000366290 MT1LQ93083 61 aa2.71□□□□□ -1.98
YBX3-204ENST00000366290 MT1MQ8N339 61 aa2.69□□□□□ -1.98
YBX3-204ENST00000366290 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
YBX3-204ENST00000366290 KRTAP5-10Q6L8G5 202 aa2.65□□□□□ -1.99
YBX3-204ENST00000366290 MT4P47944 62 aa2.64□□□□□ -1.99
YBX3-204ENST00000366290 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
YBX3-204ENST00000366290 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
YBX3-204ENST00000366290 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
YBX3-204ENST00000366290 KTN1-AS1Q86SY8 53 aa2.45□□□□□ -2.02
YBX3-204ENST00000366290 SYNE1Q8NF91 8797 aaKnown RBP2.37□□□□□ -2.03
YBX3-204ENST00000366290 MT1AP04731 61 aa2.31□□□□□ -2.04
YBX3-204ENST00000366290 KRTAP6-1Q3LI64 71 aa2.29□□□□□ -2.04
YBX3-204ENST00000366290 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
YBX3-204ENST00000366290 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
YBX3-204ENST00000366290 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
YBX3-204ENST00000366290 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
YBX3-204ENST00000366290 INE1O15225 51 aa1.89□□□□□ -2.11
YBX3-204ENST00000366290 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
YBX3-204ENST00000366290 PRM1P04553 51 aa1.44□□□□□ -2.18
YBX3-204ENST00000366290 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
YBX3-204ENST00000366290 KRTAP21-1Q3LI58 79 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 145.4 ms