RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 KMT2CQ8NEZ4 4911 aaKnown RBP6.28□□□□□ -1.4
CDC42BPB-201ENST00000361246 BIRC6Q9NR09 4857 aa6.24□□□□□ -1.41
CDC42BPB-201ENST00000361246 MT3P25713 68 aa6.22□□□□□ -1.41
CDC42BPB-201ENST00000361246 HERC1Q15751 4861 aa6.2□□□□□ -1.42
CDC42BPB-201ENST00000361246 KRTAP20-1Q3LI63 56 aa6.2□□□□□ -1.42
CDC42BPB-201ENST00000361246 PCLOQ9Y6V0 5065 aa6.18□□□□□ -1.42
CDC42BPB-201ENST00000361246 SYNE2Q8WXH0 6885 aaKnown RBP6.17□□□□□ -1.42
CDC42BPB-201ENST00000361246 PRM1P04553 51 aa6.17□□□□□ -1.42
CDC42BPB-201ENST00000361246 LCE5AQ5TCM9 118 aa6.13□□□□□ -1.43
CDC42BPB-201ENST00000361246 KRTAP4-9Q9BYQ8 210 aa6.12□□□□□ -1.43
CDC42BPB-201ENST00000361246 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.43
CDC42BPB-201ENST00000361246 FSIP2Q5CZC0 6907 aa6.04□□□□□ -1.44
CDC42BPB-201ENST00000361246 LCE2AQ5TA79 106 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPB-201ENST00000361246 EPPK1P58107 5090 aaKnown RBP5.78□□□□□ -1.48
CDC42BPB-201ENST00000361246 HMCN2Q8NDA2 5059 aa5.78□□□□□ -1.48
CDC42BPB-201ENST00000361246 KRTAP19-7Q3SYF9 63 aa5.77□□□□□ -1.49
CDC42BPB-201ENST00000361246 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPB-201ENST00000361246 KRTAP2-3P0C7H8 128 aa5.71□□□□□ -1.5
CDC42BPB-201ENST00000361246 KRTAP2-4Q9BYR9 128 aa5.71□□□□□ -1.5
CDC42BPB-201ENST00000361246 MT1AP04731 61 aa5.71□□□□□ -1.5
CDC42BPB-201ENST00000361246 KRTAP2-1Q9BYU5 128 aa5.71□□□□□ -1.5
CDC42BPB-201ENST00000361246 LCE1CQ5T751 118 aa5.7□□□□□ -1.5
CDC42BPB-201ENST00000361246 LCE1EQ5T753 118 aa5.7□□□□□ -1.5
CDC42BPB-201ENST00000361246 LCE1FQ5T754 118 aa5.7□□□□□ -1.5
CDC42BPB-201ENST00000361246 LCE1AQ5T7P2 110 aa5.7□□□□□ -1.5
CDC42BPB-201ENST00000361246 KRTAP6-2Q3LI66 62 aa5.69□□□□□ -1.5
CDC42BPB-201ENST00000361246 KRTAP6-3Q3LI67 103 aa5.63□□□□□ -1.51
CDC42BPB-201ENST00000361246 FAT4Q6V0I7 4981 aa5.63□□□□□ -1.51
CDC42BPB-201ENST00000361246 KRTAP6-1Q3LI64 71 aa5.61□□□□□ -1.51
CDC42BPB-201ENST00000361246 KRTAP2-2Q9BYT5 123 aa5.49□□□□□ -1.53
CDC42BPB-201ENST00000361246 MUC2Q02817 5179 aa5.48□□□□□ -1.53
CDC42BPB-201ENST00000361246 ABCA13Q86UQ4 5058 aa5.48□□□□□ -1.53
CDC42BPB-201ENST00000361246 KRTAP9-4Q9BYQ2 154 aa5.43□□□□□ -1.54
CDC42BPB-201ENST00000361246 LCE4AQ5TA78 99 aa5.4□□□□□ -1.54
CDC42BPB-201ENST00000361246 UBR4Q5T4S7 5183 aa5.31□□□□□ -1.56
CDC42BPB-201ENST00000361246 RNF213Q63HN8 5207 aa5.31□□□□□ -1.56
CDC42BPB-201ENST00000361246 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
CDC42BPB-201ENST00000361246 KRTAP9-9Q9BYP9 154 aa5.09□□□□□ -1.59
CDC42BPB-201ENST00000361246 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.59
CDC42BPB-201ENST00000361246 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
CDC42BPB-201ENST00000361246 KMT2DO14686 5537 aa4.98□□□□□ -1.61
CDC42BPB-201ENST00000361246 KRTAP4-6Q9BYQ5 205 aa4.9□□□□□ -1.62
CDC42BPB-201ENST00000361246 MACF1Q9UPN3 7388 aaKnown RBP4.74□□□□□ -1.65
CDC42BPB-201ENST00000361246 DSTQ03001 7570 aaKnown RBP4.71□□□□□ -1.66
CDC42BPB-201ENST00000361246 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
CDC42BPB-201ENST00000361246 KRTAP4-12Q9BQ66 201 aa4.69□□□□□ -1.66
CDC42BPB-201ENST00000361246 KRTAP4-2Q9BYR5 136 aa4.69□□□□□ -1.66
CDC42BPB-201ENST00000361246 KRTAP4-4Q9BYR3 166 aa4.69□□□□□ -1.66
CDC42BPB-201ENST00000361246 KRTAP20-2Q3LI61 65 aa4.68□□□□□ -1.66
CDC42BPB-201ENST00000361246 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
CDC42BPB-201ENST00000361246 NEBP20929 6669 aa4.52□□□□□ -1.69
CDC42BPB-201ENST00000361246 USH2AO75445 5202 aa4.5□□□□□ -1.69
CDC42BPB-201ENST00000361246 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
CDC42BPB-201ENST00000361246 SSPOA2VEC9 5147 aa4.4□□□□□ -1.71
CDC42BPB-201ENST00000361246 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
CDC42BPB-201ENST00000361246 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
CDC42BPB-201ENST00000361246 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
CDC42BPB-201ENST00000361246 KRTAP5-3Q6L8H2 238 aa3.75□□□□□ -1.81
CDC42BPB-201ENST00000361246 MUC19Q7Z5P9 8384 aa3.7□□□□□ -1.82
CDC42BPB-201ENST00000361246 MDN1Q9NU22 5596 aa3.63□□□□□ -1.83
CDC42BPB-201ENST00000361246 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
CDC42BPB-201ENST00000361246 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
CDC42BPB-201ENST00000361246 MUC5ACP98088 5654 aa3.4□□□□□ -1.86
CDC42BPB-201ENST00000361246 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
CDC42BPB-201ENST00000361246 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
CDC42BPB-201ENST00000361246 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
CDC42BPB-201ENST00000361246 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
CDC42BPB-201ENST00000361246 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
CDC42BPB-201ENST00000361246 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
CDC42BPB-201ENST00000361246 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
CDC42BPB-201ENST00000361246 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
CDC42BPB-201ENST00000361246 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
CDC42BPB-201ENST00000361246 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.02
CDC42BPB-201ENST00000361246 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.29□□□□□ -2.04
CDC42BPB-201ENST00000361246 KRTAP5-7Q6L8G8 165 aa2.26□□□□□ -2.05
CDC42BPB-201ENST00000361246 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
CDC42BPB-201ENST00000361246 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 167.7 ms