RNA–Protein interactions for RNA: ENST00000358070.9

DCX-202, Transcript of doublecortin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene DCX, Length 9,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCX-202ENST00000358070 KRTAP19-6Q3LI70 58 aa1.52□□□□□ -2.17
DCX-202ENST00000358070 KRTAP9-9Q9BYP9 154 aa1.52□□□□□ -2.17
DCX-202ENST00000358070 KRTAP9-7A8MTY7 169 aa1.52□□□□□ -2.17
DCX-202ENST00000358070 MT1XP80297 61 aa1.51□□□□□ -2.17
DCX-202ENST00000358070 TNXBP22105 4242 aa1.51□□□□□ -2.17
DCX-202ENST00000358070 FAT1Q14517 4588 aa1.51□□□□□ -2.17
DCX-202ENST00000358070 HMCN2Q8NDA2 5059 aa1.51□□□□□ -2.17
DCX-202ENST00000358070 MYCBP2O75592 4640 aa1.5□□□□□ -2.17
DCX-202ENST00000358070 KRTAP2-3P0C7H8 128 aa1.5□□□□□ -2.17
DCX-202ENST00000358070 KRTAP2-4Q9BYR9 128 aa1.5□□□□□ -2.17
DCX-202ENST00000358070 MT1BP07438 61 aa1.49□□□□□ -2.17
DCX-202ENST00000358070 KRTAP9-8Q9BYQ0 159 aa1.48□□□□□ -2.17
DCX-202ENST00000358070 KRTAP9-3Q9BYQ3 159 aa1.45□□□□□ -2.18
DCX-202ENST00000358070 LOC100996750A0A140TA64 210 aa1.45□□□□□ -2.18
DCX-202ENST00000358070 KRTAP4-6Q9BYQ5 205 aa1.45□□□□□ -2.18
DCX-202ENST00000358070 LRP1Q07954 4544 aaKnown RBP1.44□□□□□ -2.18
DCX-202ENST00000358070 KRTAP4-7Q9BYR0 210 aa1.43□□□□□ -2.18
DCX-202ENST00000358070 KRTAP19-2Q3LHN2 52 aa1.43□□□□□ -2.18
DCX-202ENST00000358070 FAT4Q6V0I7 4981 aa1.42□□□□□ -2.18
DCX-202ENST00000358070 SYNE1Q8NF91 8797 aaKnown RBP1.42□□□□□ -2.18
DCX-202ENST00000358070 KRTAP2-2Q9BYT5 123 aa1.42□□□□□ -2.18
DCX-202ENST00000358070 KRTAP2-1Q9BYU5 128 aa1.42□□□□□ -2.18
DCX-202ENST00000358070 MT1MQ8N339 61 aa1.41□□□□□ -2.18
DCX-202ENST00000358070 KRTAP4-9Q9BYQ8 210 aa1.41□□□□□ -2.18
DCX-202ENST00000358070 MT1EP04732 61 aa1.39□□□□□ -2.19
DCX-202ENST00000358070 SYNE2Q8WXH0 6885 aaKnown RBP1.38□□□□□ -2.19
DCX-202ENST00000358070 KRTAP19-7Q3SYF9 63 aa1.38□□□□□ -2.19
DCX-202ENST00000358070 LPAP08519 4548 aa1.38□□□□□ -2.19
DCX-202ENST00000358070 KRTAP4-3Q9BYR4 195 aa1.36□□□□□ -2.19
DCX-202ENST00000358070 USH2AO75445 5202 aa1.35□□□□□ -2.19
DCX-202ENST00000358070 MUC17Q685J3 4493 aa1.35□□□□□ -2.19
DCX-202ENST00000358070 KRTAP20-2Q3LI61 65 aa1.34□□□□□ -2.19
DCX-202ENST00000358070 LRP2P98164 4655 aa1.33□□□□□ -2.2
DCX-202ENST00000358070 KRTAP6-3Q3LI67 103 aa1.32□□□□□ -2.2
DCX-202ENST00000358070 KRTAP5-3Q6L8H2 238 aa1.32□□□□□ -2.2
DCX-202ENST00000358070 OBSCNQ5VST9 7968 aa1.31□□□□□ -2.2
DCX-202ENST00000358070 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.31□□□□□ -2.2
DCX-202ENST00000358070 KRTAP6-2Q3LI66 62 aa1.3□□□□□ -2.2
DCX-202ENST00000358070 DSTQ03001 7570 aaKnown RBP1.29□□□□□ -2.2
DCX-202ENST00000358070 MT1AP04731 61 aa1.29□□□□□ -2.2
DCX-202ENST00000358070 FSIP2Q5CZC0 6907 aa1.29□□□□□ -2.2
DCX-202ENST00000358070 KRTAP9-4Q9BYQ2 154 aa1.28□□□□□ -2.2
DCX-202ENST00000358070 SSPOA2VEC9 5147 aa1.27□□□□□ -2.21
DCX-202ENST00000358070 MACF1Q9UPN3 7388 aaKnown RBP1.22□□□□□ -2.21
DCX-202ENST00000358070 MUC2Q02817 5179 aa1.21□□□□□ -2.22
DCX-202ENST00000358070 MUC19Q7Z5P9 8384 aa1.2□□□□□ -2.22
DCX-202ENST00000358070 KRTAP6-1Q3LI64 71 aa1.19□□□□□ -2.22
DCX-202ENST00000358070 KRTAP4-2Q9BYR5 136 aa1.18□□□□□ -2.22
DCX-202ENST00000358070 KRTAP9-6A8MVA2 160 aa1.15□□□□□ -2.22
DCX-202ENST00000358070 KRTAP4-11Q9BYQ6 195 aa1.14□□□□□ -2.23
DCX-202ENST00000358070 KRTAP4-12Q9BQ66 201 aa1.12□□□□□ -2.23
DCX-202ENST00000358070 KRTAP4-4Q9BYR3 166 aa1.1□□□□□ -2.23
DCX-202ENST00000358070 KMT2DO14686 5537 aa1.05□□□□□ -2.24
DCX-202ENST00000358070 FCGBPQ9Y6R7 5405 aaPredicted RBP1.03□□□□□ -2.25
DCX-202ENST00000358070 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
DCX-202ENST00000358070 NEBP20929 6669 aa1.01□□□□□ -2.25
DCX-202ENST00000358070 KRTAP5-9P26371 169 aa1.01□□□□□ -2.25
DCX-202ENST00000358070 MUC5BQ9HC84 5762 aaPredicted RBP1□□□□□ -2.25
DCX-202ENST00000358070 MDN1Q9NU22 5596 aa0.99□□□□□ -2.25
DCX-202ENST00000358070 KRTAP5-5Q701N2 237 aaPredicted RBP0.98□□□□□ -2.25
DCX-202ENST00000358070 KRTAP5-4Q6L8H1 288 aa0.96□□□□□ -2.26
DCX-202ENST00000358070 MUC12Q9UKN1 5478 aa0.96□□□□□ -2.26
DCX-202ENST00000358070 AHNAKQ09666 5890 aaKnown RBP0.95□□□□□ -2.26
DCX-202ENST00000358070 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.94□□□□□ -2.26
DCX-202ENST00000358070 KRTAP5-2Q701N4 177 aa0.93□□□□□ -2.26
DCX-202ENST00000358070 GPR98Q8WXG9 6306 aa0.91□□□□□ -2.26
DCX-202ENST00000358070 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
DCX-202ENST00000358070 HMCN1Q96RW7 5635 aa0.87□□□□□ -2.27
DCX-202ENST00000358070 MUC5ACP98088 5654 aa0.78□□□□□ -2.28
DCX-202ENST00000358070 KRTAP5-8O75690 187 aa0.77□□□□□ -2.29
DCX-202ENST00000358070 MUC16Q8WXI7 14507 aa0.73□□□□□ -2.29
DCX-202ENST00000358070 KRTAP5-1Q6L8H4 278 aa0.71□□□□□ -2.3
DCX-202ENST00000358070 KRTAP5-11Q6L8G4 156 aa0.7□□□□□ -2.3
DCX-202ENST00000358070 KRTAP5-10Q6L8G5 202 aa0.7□□□□□ -2.3
DCX-202ENST00000358070 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
DCX-202ENST00000358070 KRTAP5-7Q6L8G8 165 aa0.65□□□□□ -2.31
DCX-202ENST00000358070 KRTAP21-2Q3LI59 83 aa0.62□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 55 ms