RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 LCE1DQ5T752 114 aa1.19□□□□□ -2.22
SYNE2-204ENST00000358025 KRTAP9-6A8MVA2 160 aa1.19□□□□□ -2.22
SYNE2-204ENST00000358025 KRTAP4-9Q9BYQ8 210 aa1.19□□□□□ -2.22
SYNE2-204ENST00000358025 RYR3Q15413 4870 aa1.18□□□□□ -2.22
SYNE2-204ENST00000358025 PRM1P04553 51 aa1.18□□□□□ -2.22
SYNE2-204ENST00000358025 SYNE1Q8NF91 8797 aaKnown RBP1.16□□□□□ -2.22
SYNE2-204ENST00000358025 LCE2AQ5TA79 106 aaPredicted RBP1.15□□□□□ -2.23
SYNE2-204ENST00000358025 KMT2DO14686 5537 aa1.15□□□□□ -2.23
SYNE2-204ENST00000358025 HERC1Q15751 4861 aa1.12□□□□□ -2.23
SYNE2-204ENST00000358025 KRTAP2-2Q9BYT5 123 aa1.12□□□□□ -2.23
SYNE2-204ENST00000358025 HERC2O95714 4834 aa1.12□□□□□ -2.23
SYNE2-204ENST00000358025 LCE1CQ5T751 118 aa1.12□□□□□ -2.23
SYNE2-204ENST00000358025 LCE1EQ5T753 118 aa1.12□□□□□ -2.23
SYNE2-204ENST00000358025 LCE1FQ5T754 118 aa1.12□□□□□ -2.23
SYNE2-204ENST00000358025 KRTAP9-4Q9BYQ2 154 aa1.12□□□□□ -2.23
SYNE2-204ENST00000358025 KRTAP9-2Q9BYQ4 174 aa1.11□□□□□ -2.23
SYNE2-204ENST00000358025 LCE4AQ5TA78 99 aa1.09□□□□□ -2.24
SYNE2-204ENST00000358025 EPPK1P58107 5090 aaKnown RBP1.08□□□□□ -2.24
SYNE2-204ENST00000358025 LPAP08519 4548 aa1.08□□□□□ -2.24
SYNE2-204ENST00000358025 RYR2Q92736 4967 aa1.07□□□□□ -2.24
SYNE2-204ENST00000358025 KRTAP20-1Q3LI63 56 aa1.07□□□□□ -2.24
SYNE2-204ENST00000358025 KMT2CQ8NEZ4 4911 aaKnown RBP1.07□□□□□ -2.24
SYNE2-204ENST00000358025 KRTAP6-1Q3LI64 71 aa1.06□□□□□ -2.24
SYNE2-204ENST00000358025 KRTAP6-2Q3LI66 62 aa1.05□□□□□ -2.24
SYNE2-204ENST00000358025 KRTAP9-6A0A140TA67 174 aa1.05□□□□□ -2.24
SYNE2-204ENST00000358025 GPR98Q8WXG9 6306 aa1.05□□□□□ -2.24
SYNE2-204ENST00000358025 PCLOQ9Y6V0 5065 aa1.04□□□□□ -2.24
SYNE2-204ENST00000358025 KRTAP9-7A8MTY7 169 aa1.04□□□□□ -2.24
SYNE2-204ENST00000358025 SYNE2Q8WXH0 6885 aaKnown RBP1.04□□□□□ -2.24
SYNE2-204ENST00000358025 KRTAP6-3Q3LI67 103 aa1.04□□□□□ -2.24
SYNE2-204ENST00000358025 KIAA1109Q2LD37 5005 aa1.04□□□□□ -2.24
SYNE2-204ENST00000358025 FSIP2Q5CZC0 6907 aa1.01□□□□□ -2.25
SYNE2-204ENST00000358025 HMCN2Q8NDA2 5059 aa1.01□□□□□ -2.25
SYNE2-204ENST00000358025 HYDINQ4G0P3 5121 aa1□□□□□ -2.25
SYNE2-204ENST00000358025 ABCA13Q86UQ4 5058 aa1□□□□□ -2.25
SYNE2-204ENST00000358025 KRTAP5-5Q701N2 237 aaPredicted RBP0.99□□□□□ -2.25
SYNE2-204ENST00000358025 KRTAP5-9P26371 169 aa0.98□□□□□ -2.25
SYNE2-204ENST00000358025 MDN1Q9NU22 5596 aa0.98□□□□□ -2.25
SYNE2-204ENST00000358025 KRTAP4-4Q9BYR3 166 aa0.98□□□□□ -2.25
SYNE2-204ENST00000358025 KRTAP20-2Q3LI61 65 aa0.98□□□□□ -2.25
SYNE2-204ENST00000358025 KRTAP4-6Q9BYQ5 205 aa0.96□□□□□ -2.26
SYNE2-204ENST00000358025 KRTAP4-12Q9BQ66 201 aa0.96□□□□□ -2.26
SYNE2-204ENST00000358025 KRTAP4-2Q9BYR5 136 aa0.96□□□□□ -2.26
SYNE2-204ENST00000358025 RNF213Q63HN8 5207 aa0.96□□□□□ -2.26
SYNE2-204ENST00000358025 KRTAP4-11Q9BYQ6 195 aa0.95□□□□□ -2.26
SYNE2-204ENST00000358025 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.92□□□□□ -2.26
SYNE2-204ENST00000358025 FAT4Q6V0I7 4981 aa0.92□□□□□ -2.26
SYNE2-204ENST00000358025 UBR4Q5T4S7 5183 aa0.92□□□□□ -2.26
SYNE2-204ENST00000358025 MACF1Q9UPN3 7388 aaKnown RBP0.92□□□□□ -2.26
SYNE2-204ENST00000358025 USH2AO75445 5202 aa0.91□□□□□ -2.26
SYNE2-204ENST00000358025 MUC12Q9UKN1 5478 aa0.89□□□□□ -2.27
SYNE2-204ENST00000358025 DSTQ03001 7570 aaKnown RBP0.88□□□□□ -2.27
SYNE2-204ENST00000358025 MUC2Q02817 5179 aa0.88□□□□□ -2.27
SYNE2-204ENST00000358025 OBSCNQ5VST9 7968 aa0.87□□□□□ -2.27
SYNE2-204ENST00000358025 KRTAP5-4Q6L8H1 288 aa0.87□□□□□ -2.27
SYNE2-204ENST00000358025 NEBP20929 6669 aa0.84□□□□□ -2.27
SYNE2-204ENST00000358025 KRTAP9-9Q9BYP9 154 aa0.84□□□□□ -2.28
SYNE2-204ENST00000358025 MUC5BQ9HC84 5762 aaPredicted RBP0.83□□□□□ -2.28
SYNE2-204ENST00000358025 AHNAK2Q8IVF2 5795 aa0.82□□□□□ -2.28
SYNE2-204ENST00000358025 FCGBPQ9Y6R7 5405 aaPredicted RBP0.82□□□□□ -2.28
SYNE2-204ENST00000358025 MUC5ACP98088 5654 aa0.82□□□□□ -2.28
SYNE2-204ENST00000358025 KRTAP5-2Q701N4 177 aa0.82□□□□□ -2.28
SYNE2-204ENST00000358025 MUC19Q7Z5P9 8384 aa0.81□□□□□ -2.28
SYNE2-204ENST00000358025 AHNAKQ09666 5890 aaKnown RBP0.8□□□□□ -2.28
SYNE2-204ENST00000358025 HMCN1Q96RW7 5635 aa0.78□□□□□ -2.28
SYNE2-204ENST00000358025 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.76□□□□□ -2.29
SYNE2-204ENST00000358025 SSPOA2VEC9 5147 aa0.76□□□□□ -2.29
SYNE2-204ENST00000358025 KRTAP5-10Q6L8G5 202 aa0.75□□□□□ -2.29
SYNE2-204ENST00000358025 KRTAP5-1Q6L8H4 278 aa0.75□□□□□ -2.29
SYNE2-204ENST00000358025 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
SYNE2-204ENST00000358025 KRTAP5-11Q6L8G4 156 aa0.72□□□□□ -2.29
SYNE2-204ENST00000358025 KRTAP5-3Q6L8H2 238 aa0.71□□□□□ -2.3
SYNE2-204ENST00000358025 KRTAP5-8O75690 187 aa0.7□□□□□ -2.3
SYNE2-204ENST00000358025 KRTAP5-7Q6L8G8 165 aa0.68□□□□□ -2.3
SYNE2-204ENST00000358025 MUC16Q8WXI7 14507 aa0.65□□□□□ -2.31
SYNE2-204ENST00000358025 PHGR1C9JFL3 82 aa0.64□□□□□ -2.31
SYNE2-204ENST00000358025 KRTAP21-2Q3LI59 83 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 95.1 ms