RNA–Protein interactions for RNA: ENST00000357985.6

FAM3B-201, Transcript of family with sequence similarity 3 member B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FAM3B, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-201ENST00000357985 A0A1B0GU33 70 aa4.96□□□□□ -1.62
FAM3B-201ENST00000357985 LINC01558Q9Y6Z2 57 aa4.95□□□□□ -1.62
FAM3B-201ENST00000357985 V9GYY9 64 aa4.94□□□□□ -1.62
FAM3B-201ENST00000357985 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
FAM3B-201ENST00000357985 SMIM26A0A096LP01 95 aa4.87□□□□□ -1.63
FAM3B-201ENST00000357985 RPS28P62857 69 aaKnown RBP4.87□□□□□ -1.63
FAM3B-201ENST00000357985 PP632Q6XCG6 107 aa4.87□□□□□ -1.63
FAM3B-201ENST00000357985 A0A0D9SG42 100 aa4.86□□□□□ -1.63
FAM3B-201ENST00000357985 MT1GP13640 62 aa4.86□□□□□ -1.63
FAM3B-201ENST00000357985 Q1T7F1 81 aa4.85□□□□□ -1.63
FAM3B-201ENST00000357985 UQCR11O14957 56 aa4.83□□□□□ -1.64
FAM3B-201ENST00000357985 KRTAP19-5Q3LI72 72 aa4.83□□□□□ -1.64
FAM3B-201ENST00000357985 SPATA8Q6RVD6 105 aa4.83□□□□□ -1.64
FAM3B-201ENST00000357985 MT4P47944 62 aa4.8□□□□□ -1.64
FAM3B-201ENST00000357985 SPINT4Q6UDR6 99 aa4.79□□□□□ -1.64
FAM3B-201ENST00000357985 MT1MQ8N339 61 aa4.78□□□□□ -1.64
FAM3B-201ENST00000357985 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
FAM3B-201ENST00000357985 PSPHP1O15172 72 aa4.74□□□□□ -1.65
FAM3B-201ENST00000357985 MT1LQ93083 61 aa4.73□□□□□ -1.65
FAM3B-201ENST00000357985 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
FAM3B-201ENST00000357985 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
FAM3B-201ENST00000357985 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
FAM3B-201ENST00000357985 A8MU10 97 aa4.69□□□□□ -1.66
FAM3B-201ENST00000357985 KRTAP5-4Q6L8H1 288 aa4.68□□□□□ -1.66
FAM3B-201ENST00000357985 K7ERS5 55 aa4.66□□□□□ -1.66
FAM3B-201ENST00000357985 A6NED7 52 aa4.65□□□□□ -1.67
FAM3B-201ENST00000357985 KRTAP5-10Q6L8G5 202 aa4.65□□□□□ -1.67
FAM3B-201ENST00000357985 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
FAM3B-201ENST00000357985 C10orf95Q9H7T3 257 aa4.64□□□□□ -1.67
FAM3B-201ENST00000357985 LCE3AQ5TA76 89 aa4.63□□□□□ -1.67
FAM3B-201ENST00000357985 TNP1P09430 55 aa4.6□□□□□ -1.67
FAM3B-201ENST00000357985 KRTAP5-7Q6L8G8 165 aa4.52□□□□□ -1.69
FAM3B-201ENST00000357985 CDC42SE1Q9NRR8 79 aa4.51□□□□□ -1.69
FAM3B-201ENST00000357985 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
FAM3B-201ENST00000357985 KRTAP20-2Q3LI61 65 aa4.45□□□□□ -1.7
FAM3B-201ENST00000357985 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
FAM3B-201ENST00000357985 KRTAP25-1Q3LHN0 102 aa4.39□□□□□ -1.71
FAM3B-201ENST00000357985 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
FAM3B-201ENST00000357985 KRTAP12-4P60329 112 aa4.36□□□□□ -1.71
FAM3B-201ENST00000357985 ROMO1P60602 79 aa4.32□□□□□ -1.72
FAM3B-201ENST00000357985 BRK1Q8WUW1 75 aa4.32□□□□□ -1.72
FAM3B-201ENST00000357985 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
FAM3B-201ENST00000357985 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
FAM3B-201ENST00000357985 PMAIP1Q13794 54 aa4.1□□□□□ -1.75
FAM3B-201ENST00000357985 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
FAM3B-201ENST00000357985 PRO0628Q9UI54 55 aa4.07□□□□□ -1.76
FAM3B-201ENST00000357985 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
FAM3B-201ENST00000357985 MT1AP04731 61 aa4.04□□□□□ -1.76
FAM3B-201ENST00000357985 KRTAP6-1Q3LI64 71 aa4□□□□□ -1.77
FAM3B-201ENST00000357985 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
FAM3B-201ENST00000357985 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
FAM3B-201ENST00000357985 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.78
FAM3B-201ENST00000357985 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
FAM3B-201ENST00000357985 KRTAP6-2Q3LI66 62 aa3.87□□□□□ -1.79
FAM3B-201ENST00000357985 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
FAM3B-201ENST00000357985 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
FAM3B-201ENST00000357985 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
FAM3B-201ENST00000357985 NDUFAF8A1L188 74 aa3.73□□□□□ -1.81
FAM3B-201ENST00000357985 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.72□□□□□ -1.81
FAM3B-201ENST00000357985 MT3P25713 68 aa3.71□□□□□ -1.82
FAM3B-201ENST00000357985 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
FAM3B-201ENST00000357985 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
FAM3B-201ENST00000357985 LCE1EQ5T753 118 aa3.46□□□□□ -1.86
FAM3B-201ENST00000357985 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
FAM3B-201ENST00000357985 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
FAM3B-201ENST00000357985 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
FAM3B-201ENST00000357985 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
FAM3B-201ENST00000357985 KRTAP4-4Q9BYR3 166 aa3.11□□□□□ -1.91
FAM3B-201ENST00000357985 LCE3EQ5T5B0 92 aa3.08□□□□□ -1.92
FAM3B-201ENST00000357985 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
FAM3B-201ENST00000357985 PHGR1C9JFL3 82 aa2.74□□□□□ -1.97
FAM3B-201ENST00000357985 KRTAP21-2Q3LI59 83 aa2.63□□□□□ -1.99
FAM3B-201ENST00000357985 INE1O15225 51 aa2.44□□□□□ -2.02
FAM3B-201ENST00000357985 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
FAM3B-201ENST00000357985 PRM1P04553 51 aa2.18□□□□□ -2.06
FAM3B-201ENST00000357985 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
FAM3B-201ENST00000357985 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 129.7 ms