RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 FAT4Q6V0I7 4981 aa2.01□□□□□ -2.09
VPS13B-202ENST00000357162 KRTAP19-2Q3LHN2 52 aa2□□□□□ -2.09
VPS13B-202ENST00000357162 SPRR2EP22531 72 aa1.98□□□□□ -2.09
VPS13B-202ENST00000357162 SPRR2DP22532 72 aa1.97□□□□□ -2.09
VPS13B-202ENST00000357162 LPAP08519 4548 aa1.97□□□□□ -2.09
VPS13B-202ENST00000357162 KRTAP19-6Q3LI70 58 aa1.96□□□□□ -2.1
VPS13B-202ENST00000357162 KMT2DO14686 5537 aa1.95□□□□□ -2.1
VPS13B-202ENST00000357162 PRM1P04553 51 aa1.94□□□□□ -2.1
VPS13B-202ENST00000357162 LCE1AQ5T7P2 110 aa1.92□□□□□ -2.1
VPS13B-202ENST00000357162 KRTAP19-7Q3SYF9 63 aa1.89□□□□□ -2.11
VPS13B-202ENST00000357162 KRTAP4-8A0A0G2JLE6 195 aa1.89□□□□□ -2.11
VPS13B-202ENST00000357162 KRTAP4-8Q9BYQ9 185 aa1.89□□□□□ -2.11
VPS13B-202ENST00000357162 SYNE1Q8NF91 8797 aaKnown RBP1.88□□□□□ -2.11
VPS13B-202ENST00000357162 GPR98Q8WXG9 6306 aa1.84□□□□□ -2.11
VPS13B-202ENST00000357162 USH2AO75445 5202 aa1.84□□□□□ -2.12
VPS13B-202ENST00000357162 FCGBPQ9Y6R7 5405 aaPredicted RBP1.82□□□□□ -2.12
VPS13B-202ENST00000357162 MUC2Q02817 5179 aa1.81□□□□□ -2.12
VPS13B-202ENST00000357162 LCE2DQ5TA82 110 aaPredicted RBP1.8□□□□□ -2.12
VPS13B-202ENST00000357162 LCE5AQ5TCM9 118 aa1.79□□□□□ -2.12
VPS13B-202ENST00000357162 KRTAP4-7Q9BYR0 210 aa1.74□□□□□ -2.13
VPS13B-202ENST00000357162 LCE4AQ5TA78 99 aa1.73□□□□□ -2.13
VPS13B-202ENST00000357162 KRTAP6-2Q3LI66 62 aa1.72□□□□□ -2.13
VPS13B-202ENST00000357162 LCE2AQ5TA79 106 aaPredicted RBP1.71□□□□□ -2.13
VPS13B-202ENST00000357162 KRTAP9-6A8MVA2 160 aa1.71□□□□□ -2.14
VPS13B-202ENST00000357162 KRTAP9-4Q9BYQ2 154 aa1.7□□□□□ -2.14
VPS13B-202ENST00000357162 LCE1DQ5T752 114 aa1.69□□□□□ -2.14
VPS13B-202ENST00000357162 KRTAP2-2Q9BYT5 123 aa1.69□□□□□ -2.14
VPS13B-202ENST00000357162 KRTAP9-2Q9BYQ4 174 aa1.69□□□□□ -2.14
VPS13B-202ENST00000357162 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
VPS13B-202ENST00000357162 KRTAP6-1Q3LI64 71 aa1.67□□□□□ -2.14
VPS13B-202ENST00000357162 LOC100996750A0A140TA64 210 aa1.65□□□□□ -2.14
VPS13B-202ENST00000357162 KRTAP6-3Q3LI67 103 aa1.63□□□□□ -2.15
VPS13B-202ENST00000357162 LCE1BQ5T7P3 118 aa1.63□□□□□ -2.15
VPS13B-202ENST00000357162 MT4P47944 62 aa1.57□□□□□ -2.16
VPS13B-202ENST00000357162 HMCN1Q96RW7 5635 aa1.57□□□□□ -2.16
VPS13B-202ENST00000357162 KRTAP4-3Q9BYR4 195 aa1.57□□□□□ -2.16
VPS13B-202ENST00000357162 DSTQ03001 7570 aaKnown RBP1.55□□□□□ -2.16
VPS13B-202ENST00000357162 SSPOA2VEC9 5147 aa1.55□□□□□ -2.16
VPS13B-202ENST00000357162 KRTAP9-7A8MTY7 169 aa1.55□□□□□ -2.16
VPS13B-202ENST00000357162 KRTAP4-9Q9BYQ8 210 aa1.54□□□□□ -2.16
VPS13B-202ENST00000357162 KRTAP9-6A0A140TA67 174 aa1.54□□□□□ -2.16
VPS13B-202ENST00000357162 FSIP2Q5CZC0 6907 aa1.51□□□□□ -2.17
VPS13B-202ENST00000357162 KRTAP5-9P26371 169 aa1.51□□□□□ -2.17
VPS13B-202ENST00000357162 SYNE2Q8WXH0 6885 aaKnown RBP1.49□□□□□ -2.17
VPS13B-202ENST00000357162 KRTAP20-1Q3LI63 56 aa1.48□□□□□ -2.17
VPS13B-202ENST00000357162 MACF1Q9UPN3 7388 aaKnown RBP1.46□□□□□ -2.18
VPS13B-202ENST00000357162 LCE1EQ5T753 118 aa1.45□□□□□ -2.18
VPS13B-202ENST00000357162 MUC5ACP98088 5654 aa1.43□□□□□ -2.18
VPS13B-202ENST00000357162 KRTAP9-9Q9BYP9 154 aa1.43□□□□□ -2.18
VPS13B-202ENST00000357162 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
VPS13B-202ENST00000357162 NEBP20929 6669 aa1.42□□□□□ -2.18
VPS13B-202ENST00000357162 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.42□□□□□ -2.18
VPS13B-202ENST00000357162 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
VPS13B-202ENST00000357162 LCE1CQ5T751 118 aa1.36□□□□□ -2.19
VPS13B-202ENST00000357162 LCE1FQ5T754 118 aa1.36□□□□□ -2.19
VPS13B-202ENST00000357162 KRTAP5-5Q701N2 237 aaPredicted RBP1.36□□□□□ -2.19
VPS13B-202ENST00000357162 OBSCNQ5VST9 7968 aa1.34□□□□□ -2.19
VPS13B-202ENST00000357162 KRTAP20-2Q3LI61 65 aa1.34□□□□□ -2.2
VPS13B-202ENST00000357162 KRTAP5-4Q6L8H1 288 aa1.33□□□□□ -2.2
VPS13B-202ENST00000357162 KRTAP4-11Q9BYQ6 195 aa1.25□□□□□ -2.21
VPS13B-202ENST00000357162 KRTAP5-3Q6L8H2 238 aa1.18□□□□□ -2.22
VPS13B-202ENST00000357162 MUC19Q7Z5P9 8384 aa1.18□□□□□ -2.22
VPS13B-202ENST00000357162 KRTAP4-6Q9BYQ5 205 aa1.16□□□□□ -2.22
VPS13B-202ENST00000357162 KRTAP5-2Q701N4 177 aa1.13□□□□□ -2.23
VPS13B-202ENST00000357162 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
VPS13B-202ENST00000357162 KRTAP5-11Q6L8G4 156 aa1.08□□□□□ -2.24
VPS13B-202ENST00000357162 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.06□□□□□ -2.24
VPS13B-202ENST00000357162 KRTAP5-8O75690 187 aa1□□□□□ -2.25
VPS13B-202ENST00000357162 KRTAP4-4Q9BYR3 166 aa0.99□□□□□ -2.25
VPS13B-202ENST00000357162 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
VPS13B-202ENST00000357162 KRTAP5-1Q6L8H4 278 aa0.97□□□□□ -2.25
VPS13B-202ENST00000357162 KRTAP4-2Q9BYR5 136 aa0.96□□□□□ -2.26
VPS13B-202ENST00000357162 KRTAP21-2Q3LI59 83 aa0.91□□□□□ -2.26
VPS13B-202ENST00000357162 KRTAP4-12Q9BQ66 201 aa0.9□□□□□ -2.27
VPS13B-202ENST00000357162 KRTAP5-7Q6L8G8 165 aa0.87□□□□□ -2.27
VPS13B-202ENST00000357162 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
VPS13B-202ENST00000357162 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 81.3 ms