RNA–Protein interactions for RNA: ENST00000356924.8

ABCD4-201, Transcript of ATP binding cassette subfamily D member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCD4, Length 3,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-201ENST00000356924 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.75
ABCD4-201ENST00000356924 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
ABCD4-201ENST00000356924 KRTAP19-7Q3SYF9 63 aa4.09□□□□□ -1.75
ABCD4-201ENST00000356924 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
ABCD4-201ENST00000356924 MT1EP04732 61 aa4.01□□□□□ -1.77
ABCD4-201ENST00000356924 LCE1DQ5T752 114 aa4□□□□□ -1.77
ABCD4-201ENST00000356924 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
ABCD4-201ENST00000356924 MT1LQ93083 61 aa3.94□□□□□ -1.78
ABCD4-201ENST00000356924 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
ABCD4-201ENST00000356924 LCE3CQ5T5A8 94 aa3.9□□□□□ -1.78
ABCD4-201ENST00000356924 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
ABCD4-201ENST00000356924 SPRR2FQ96RM1 72 aa3.87□□□□□ -1.79
ABCD4-201ENST00000356924 DSTQ03001 7570 aaKnown RBP3.87□□□□□ -1.79
ABCD4-201ENST00000356924 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
ABCD4-201ENST00000356924 KRTAP19-4Q3LI73 84 aa3.85□□□□□ -1.79
ABCD4-201ENST00000356924 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
ABCD4-201ENST00000356924 KRTAP19-3Q7Z4W3 81 aa3.83□□□□□ -1.8
ABCD4-201ENST00000356924 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
ABCD4-201ENST00000356924 SYNE2Q8WXH0 6885 aaKnown RBP3.8□□□□□ -1.8
ABCD4-201ENST00000356924 MT1GP13640 62 aa3.78□□□□□ -1.8
ABCD4-201ENST00000356924 MT1MQ8N339 61 aa3.77□□□□□ -1.81
ABCD4-201ENST00000356924 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
ABCD4-201ENST00000356924 LCE5AQ5TCM9 118 aa3.76□□□□□ -1.81
ABCD4-201ENST00000356924 KRTAP9-6A8MVA2 160 aa3.73□□□□□ -1.81
ABCD4-201ENST00000356924 KRTAP2-3P0C7H8 128 aa3.73□□□□□ -1.81
ABCD4-201ENST00000356924 KRTAP2-4Q9BYR9 128 aa3.73□□□□□ -1.81
ABCD4-201ENST00000356924 KRTAP2-1Q9BYU5 128 aa3.73□□□□□ -1.81
ABCD4-201ENST00000356924 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
ABCD4-201ENST00000356924 KRTAP4-3Q9BYR4 195 aa3.73□□□□□ -1.81
ABCD4-201ENST00000356924 KRTAP4-11Q9BYQ6 195 aa3.72□□□□□ -1.81
ABCD4-201ENST00000356924 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
ABCD4-201ENST00000356924 SPRR2EP22531 72 aa3.66□□□□□ -1.82
ABCD4-201ENST00000356924 SPRR2BP35325 72 aa3.66□□□□□ -1.82
ABCD4-201ENST00000356924 SPRR2AP35326 72 aa3.66□□□□□ -1.82
ABCD4-201ENST00000356924 KRTAP5-3Q6L8H2 238 aa3.63□□□□□ -1.83
ABCD4-201ENST00000356924 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
ABCD4-201ENST00000356924 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
ABCD4-201ENST00000356924 KRTAP9-7A8MTY7 169 aa3.56□□□□□ -1.84
ABCD4-201ENST00000356924 SPRR2DP22532 72 aa3.52□□□□□ -1.85
ABCD4-201ENST00000356924 NEBP20929 6669 aa3.45□□□□□ -1.86
ABCD4-201ENST00000356924 KRTAP12-4P60329 112 aa3.45□□□□□ -1.86
ABCD4-201ENST00000356924 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
ABCD4-201ENST00000356924 MT1AP04731 61 aa3.34□□□□□ -1.88
ABCD4-201ENST00000356924 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
ABCD4-201ENST00000356924 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
ABCD4-201ENST00000356924 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
ABCD4-201ENST00000356924 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
ABCD4-201ENST00000356924 PRM1P04553 51 aa3.13□□□□□ -1.91
ABCD4-201ENST00000356924 MT4P47944 62 aa3.06□□□□□ -1.92
ABCD4-201ENST00000356924 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
ABCD4-201ENST00000356924 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
ABCD4-201ENST00000356924 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
ABCD4-201ENST00000356924 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
ABCD4-201ENST00000356924 MT3P25713 68 aa3□□□□□ -1.93
ABCD4-201ENST00000356924 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
ABCD4-201ENST00000356924 HMCN1Q96RW7 5635 aa2.92□□□□□ -1.94
ABCD4-201ENST00000356924 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
ABCD4-201ENST00000356924 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
ABCD4-201ENST00000356924 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
ABCD4-201ENST00000356924 AHNAK2Q8IVF2 5795 aa2.58□□□□□ -2
ABCD4-201ENST00000356924 KRTAP5-1Q6L8H4 278 aa2.53□□□□□ -2
ABCD4-201ENST00000356924 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
ABCD4-201ENST00000356924 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
ABCD4-201ENST00000356924 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
ABCD4-201ENST00000356924 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
ABCD4-201ENST00000356924 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
ABCD4-201ENST00000356924 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
ABCD4-201ENST00000356924 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
ABCD4-201ENST00000356924 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
ABCD4-201ENST00000356924 LCE1FQ5T754 118 aa2.28□□□□□ -2.04
ABCD4-201ENST00000356924 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
ABCD4-201ENST00000356924 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
ABCD4-201ENST00000356924 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
ABCD4-201ENST00000356924 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
ABCD4-201ENST00000356924 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
ABCD4-201ENST00000356924 PHGR1C9JFL3 82 aa1.84□□□□□ -2.12
ABCD4-201ENST00000356924 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 9.6 ms