RNA–Protein interactions for RNA: ENST00000355628.9

FAM208A-201, Transcript of family with sequence similarity 208 member A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM208A, Length 5,239 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM208A-201ENST00000355628 KRTAP19-3Q7Z4W3 81 aa5.24□□□□□ -1.57
FAM208A-201ENST00000355628 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
FAM208A-201ENST00000355628 LCE3DQ9BYE3 92 aa5.17□□□□□ -1.58
FAM208A-201ENST00000355628 MT1EP04732 61 aa5.12□□□□□ -1.59
FAM208A-201ENST00000355628 LCE3EQ5T5B0 92 aa5.12□□□□□ -1.59
FAM208A-201ENST00000355628 MT1LQ93083 61 aa5.12□□□□□ -1.59
FAM208A-201ENST00000355628 MUC2Q02817 5179 aa5.05□□□□□ -1.6
FAM208A-201ENST00000355628 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.01□□□□□ -1.61
FAM208A-201ENST00000355628 KRTAP6-3Q3LI67 103 aa5□□□□□ -1.61
FAM208A-201ENST00000355628 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
FAM208A-201ENST00000355628 KRTAP20-1Q3LI63 56 aa4.98□□□□□ -1.61
FAM208A-201ENST00000355628 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
FAM208A-201ENST00000355628 MT1MQ8N339 61 aa4.97□□□□□ -1.61
FAM208A-201ENST00000355628 SYNE2Q8WXH0 6885 aaKnown RBP4.96□□□□□ -1.61
FAM208A-201ENST00000355628 MT4P47944 62 aa4.94□□□□□ -1.62
FAM208A-201ENST00000355628 KRTAP2-3P0C7H8 128 aa4.8□□□□□ -1.64
FAM208A-201ENST00000355628 KRTAP2-4Q9BYR9 128 aa4.8□□□□□ -1.64
FAM208A-201ENST00000355628 KRTAP19-7Q3SYF9 63 aa4.79□□□□□ -1.64
FAM208A-201ENST00000355628 LCE1AQ5T7P2 110 aa4.79□□□□□ -1.64
FAM208A-201ENST00000355628 MT3P25713 68 aa4.76□□□□□ -1.65
FAM208A-201ENST00000355628 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
FAM208A-201ENST00000355628 PRM1P04553 51 aa4.72□□□□□ -1.65
FAM208A-201ENST00000355628 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.66
FAM208A-201ENST00000355628 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
FAM208A-201ENST00000355628 USH2AO75445 5202 aa4.66□□□□□ -1.66
FAM208A-201ENST00000355628 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.67
FAM208A-201ENST00000355628 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
FAM208A-201ENST00000355628 MT1AP04731 61 aa4.59□□□□□ -1.68
FAM208A-201ENST00000355628 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
FAM208A-201ENST00000355628 LCE4AQ5TA78 99 aa4.49□□□□□ -1.69
FAM208A-201ENST00000355628 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
FAM208A-201ENST00000355628 LCE1DQ5T752 114 aa4.44□□□□□ -1.7
FAM208A-201ENST00000355628 MACF1Q9UPN3 7388 aaKnown RBP4.42□□□□□ -1.7
FAM208A-201ENST00000355628 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
FAM208A-201ENST00000355628 FCGBPQ9Y6R7 5405 aaPredicted RBP4.4□□□□□ -1.7
FAM208A-201ENST00000355628 KMT2DO14686 5537 aa4.39□□□□□ -1.71
FAM208A-201ENST00000355628 KRTAP9-6A8MVA2 160 aa4.38□□□□□ -1.71
FAM208A-201ENST00000355628 SSPOA2VEC9 5147 aa4.37□□□□□ -1.71
FAM208A-201ENST00000355628 NEBP20929 6669 aa4.34□□□□□ -1.71
FAM208A-201ENST00000355628 KRTAP5-9P26371 169 aa4.33□□□□□ -1.72
FAM208A-201ENST00000355628 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
FAM208A-201ENST00000355628 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
FAM208A-201ENST00000355628 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.73
FAM208A-201ENST00000355628 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
FAM208A-201ENST00000355628 MDN1Q9NU22 5596 aa4.11□□□□□ -1.75
FAM208A-201ENST00000355628 MUC12Q9UKN1 5478 aa4.05□□□□□ -1.76
FAM208A-201ENST00000355628 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
FAM208A-201ENST00000355628 KRTAP4-6Q9BYQ5 205 aa3.88□□□□□ -1.79
FAM208A-201ENST00000355628 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
FAM208A-201ENST00000355628 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
FAM208A-201ENST00000355628 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
FAM208A-201ENST00000355628 LCE1CQ5T751 118 aa3.74□□□□□ -1.81
FAM208A-201ENST00000355628 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
FAM208A-201ENST00000355628 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
FAM208A-201ENST00000355628 KRTAP5-4Q6L8H1 288 aa3.64□□□□□ -1.83
FAM208A-201ENST00000355628 KRTAP4-11Q9BYQ6 195 aa3.5□□□□□ -1.85
FAM208A-201ENST00000355628 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
FAM208A-201ENST00000355628 KRTAP5-3Q6L8H2 238 aa3.38□□□□□ -1.87
FAM208A-201ENST00000355628 AHNAK2Q8IVF2 5795 aa3.29□□□□□ -1.88
FAM208A-201ENST00000355628 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.89
FAM208A-201ENST00000355628 KRTAP4-2Q9BYR5 136 aa3.21□□□□□ -1.89
FAM208A-201ENST00000355628 MUC5ACP98088 5654 aa3.2□□□□□ -1.9
FAM208A-201ENST00000355628 HMCN1Q96RW7 5635 aa3.19□□□□□ -1.9
FAM208A-201ENST00000355628 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
FAM208A-201ENST00000355628 KRTAP5-8O75690 187 aa3.03□□□□□ -1.92
FAM208A-201ENST00000355628 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
FAM208A-201ENST00000355628 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
FAM208A-201ENST00000355628 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
FAM208A-201ENST00000355628 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
FAM208A-201ENST00000355628 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
FAM208A-201ENST00000355628 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
FAM208A-201ENST00000355628 PHGR1C9JFL3 82 aa2.58□□□□□ -2
FAM208A-201ENST00000355628 KRTAP5-11Q6L8G4 156 aa2.51□□□□□ -2.01
FAM208A-201ENST00000355628 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
FAM208A-201ENST00000355628 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
FAM208A-201ENST00000355628 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
FAM208A-201ENST00000355628 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 127.8 ms