RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 LOC100996750A0A140TA64 210 aa3.38□□□□□ -1.87
NUDCD3-202ENST00000355451 KRTAP9-7A8MTY7 169 aa3.32□□□□□ -1.88
NUDCD3-202ENST00000355451 RYR3Q15413 4870 aa3.31□□□□□ -1.88
NUDCD3-202ENST00000355451 MUC17Q685J3 4493 aa3.31□□□□□ -1.88
NUDCD3-202ENST00000355451 LCE4AQ5TA78 99 aa3.28□□□□□ -1.88
NUDCD3-202ENST00000355451 KRTAP2-3P0C7H8 128 aa3.28□□□□□ -1.89
NUDCD3-202ENST00000355451 KRTAP2-4Q9BYR9 128 aa3.28□□□□□ -1.89
NUDCD3-202ENST00000355451 SYNE2Q8WXH0 6885 aaKnown RBP3.27□□□□□ -1.89
NUDCD3-202ENST00000355451 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
NUDCD3-202ENST00000355451 KRTAP4-9Q9BYQ8 210 aa3.26□□□□□ -1.89
NUDCD3-202ENST00000355451 LCE2AQ5TA79 106 aaPredicted RBP3.24□□□□□ -1.89
NUDCD3-202ENST00000355451 KMT2CQ8NEZ4 4911 aaKnown RBP3.21□□□□□ -1.9
NUDCD3-202ENST00000355451 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
NUDCD3-202ENST00000355451 KRTAP2-1Q9BYU5 128 aa3.16□□□□□ -1.9
NUDCD3-202ENST00000355451 MT1AP04731 61 aa3.15□□□□□ -1.91
NUDCD3-202ENST00000355451 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
NUDCD3-202ENST00000355451 KRTAP19-2Q3LHN2 52 aa3.1□□□□□ -1.91
NUDCD3-202ENST00000355451 KRTAP2-2Q9BYT5 123 aa3.1□□□□□ -1.91
NUDCD3-202ENST00000355451 KRTAP6-3Q3LI67 103 aa3□□□□□ -1.93
NUDCD3-202ENST00000355451 KRTAP19-7Q3SYF9 63 aa2.98□□□□□ -1.93
NUDCD3-202ENST00000355451 FSIP2Q5CZC0 6907 aa2.98□□□□□ -1.93
NUDCD3-202ENST00000355451 HMCN2Q8NDA2 5059 aa2.98□□□□□ -1.93
NUDCD3-202ENST00000355451 HERC2O95714 4834 aa2.96□□□□□ -1.94
NUDCD3-202ENST00000355451 KRTAP9-4Q9BYQ2 154 aa2.96□□□□□ -1.94
NUDCD3-202ENST00000355451 KIAA1109Q2LD37 5005 aa2.94□□□□□ -1.94
NUDCD3-202ENST00000355451 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.94□□□□□ -1.94
NUDCD3-202ENST00000355451 KRTAP20-2Q3LI61 65 aa2.92□□□□□ -1.94
NUDCD3-202ENST00000355451 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.94
NUDCD3-202ENST00000355451 HERC1Q15751 4861 aa2.88□□□□□ -1.95
NUDCD3-202ENST00000355451 RYR2Q92736 4967 aa2.87□□□□□ -1.95
NUDCD3-202ENST00000355451 MUC2Q02817 5179 aa2.86□□□□□ -1.95
NUDCD3-202ENST00000355451 BIRC6Q9NR09 4857 aa2.84□□□□□ -1.96
NUDCD3-202ENST00000355451 KMT2DO14686 5537 aa2.74□□□□□ -1.97
NUDCD3-202ENST00000355451 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
NUDCD3-202ENST00000355451 PCLOQ9Y6V0 5065 aa2.72□□□□□ -1.97
NUDCD3-202ENST00000355451 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
NUDCD3-202ENST00000355451 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
NUDCD3-202ENST00000355451 KRTAP4-6Q9BYQ5 205 aa2.62□□□□□ -1.99
NUDCD3-202ENST00000355451 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
NUDCD3-202ENST00000355451 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
NUDCD3-202ENST00000355451 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
NUDCD3-202ENST00000355451 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
NUDCD3-202ENST00000355451 EPPK1P58107 5090 aaKnown RBP2.58□□□□□ -2
NUDCD3-202ENST00000355451 FAT4Q6V0I7 4981 aa2.57□□□□□ -2
NUDCD3-202ENST00000355451 UBR4Q5T4S7 5183 aa2.54□□□□□ -2
NUDCD3-202ENST00000355451 ABCA13Q86UQ4 5058 aa2.5□□□□□ -2.01
NUDCD3-202ENST00000355451 OBSCNQ5VST9 7968 aa2.49□□□□□ -2.01
NUDCD3-202ENST00000355451 FCGBPQ9Y6R7 5405 aaPredicted RBP2.46□□□□□ -2.02
NUDCD3-202ENST00000355451 MACF1Q9UPN3 7388 aaKnown RBP2.43□□□□□ -2.02
NUDCD3-202ENST00000355451 RNF213Q63HN8 5207 aa2.38□□□□□ -2.03
NUDCD3-202ENST00000355451 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
NUDCD3-202ENST00000355451 NEBP20929 6669 aa2.16□□□□□ -2.06
NUDCD3-202ENST00000355451 USH2AO75445 5202 aa2.15□□□□□ -2.07
NUDCD3-202ENST00000355451 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
NUDCD3-202ENST00000355451 MUC12Q9UKN1 5478 aa2.14□□□□□ -2.07
NUDCD3-202ENST00000355451 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
NUDCD3-202ENST00000355451 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
NUDCD3-202ENST00000355451 SSPOA2VEC9 5147 aa2.12□□□□□ -2.07
NUDCD3-202ENST00000355451 KRTAP5-9P26371 169 aa2.11□□□□□ -2.07
NUDCD3-202ENST00000355451 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
NUDCD3-202ENST00000355451 MDN1Q9NU22 5596 aa1.9□□□□□ -2.11
NUDCD3-202ENST00000355451 KRTAP5-3Q6L8H2 238 aa1.89□□□□□ -2.11
NUDCD3-202ENST00000355451 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
NUDCD3-202ENST00000355451 KRTAP5-8O75690 187 aa1.73□□□□□ -2.13
NUDCD3-202ENST00000355451 KRTAP5-10Q6L8G5 202 aa1.54□□□□□ -2.16
NUDCD3-202ENST00000355451 KRTAP5-2Q701N4 177 aa1.52□□□□□ -2.17
NUDCD3-202ENST00000355451 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
NUDCD3-202ENST00000355451 HMCN1Q96RW7 5635 aa1.5□□□□□ -2.17
NUDCD3-202ENST00000355451 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
NUDCD3-202ENST00000355451 KRTAP5-1Q6L8H4 278 aa1.42□□□□□ -2.18
NUDCD3-202ENST00000355451 KRTAP5-11Q6L8G4 156 aa1.34□□□□□ -2.19
NUDCD3-202ENST00000355451 KRTAP21-2Q3LI59 83 aa1.34□□□□□ -2.2
NUDCD3-202ENST00000355451 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
NUDCD3-202ENST00000355451 AHNAKQ09666 5890 aaKnown RBP1.25□□□□□ -2.21
NUDCD3-202ENST00000355451 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.19□□□□□ -2.22
NUDCD3-202ENST00000355451 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
NUDCD3-202ENST00000355451 KRTAP5-7Q6L8G8 165 aa1.04□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 8.3 ms