RNA–Protein interactions for RNA: ENST00000354412.7

LRP8-203, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-203ENST00000354412 MUC12Q9UKN1 5478 aa4.66□□□□□ -1.66
LRP8-203ENST00000354412 LCE2DQ5TA82 110 aaPredicted RBP4.65□□□□□ -1.67
LRP8-203ENST00000354412 MT1EP04732 61 aa4.64□□□□□ -1.67
LRP8-203ENST00000354412 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.67
LRP8-203ENST00000354412 KRTAP9-2Q9BYQ4 174 aa4.58□□□□□ -1.68
LRP8-203ENST00000354412 SYNE2Q8WXH0 6885 aaKnown RBP4.53□□□□□ -1.68
LRP8-203ENST00000354412 DSTQ03001 7570 aaKnown RBP4.45□□□□□ -1.7
LRP8-203ENST00000354412 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
LRP8-203ENST00000354412 CRCT1Q9UGL9 99 aa4.4□□□□□ -1.7
LRP8-203ENST00000354412 LOC100996750A0A140TA64 210 aa4.4□□□□□ -1.71
LRP8-203ENST00000354412 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
LRP8-203ENST00000354412 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
LRP8-203ENST00000354412 MT1GP13640 62 aa4.38□□□□□ -1.71
LRP8-203ENST00000354412 MDN1Q9NU22 5596 aa4.37□□□□□ -1.71
LRP8-203ENST00000354412 KRTAP19-3Q7Z4W3 81 aa4.35□□□□□ -1.71
LRP8-203ENST00000354412 MT1MQ8N339 61 aa4.32□□□□□ -1.72
LRP8-203ENST00000354412 LCE5AQ5TCM9 118 aa4.22□□□□□ -1.73
LRP8-203ENST00000354412 MT1AP04731 61 aa4.15□□□□□ -1.75
LRP8-203ENST00000354412 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
LRP8-203ENST00000354412 KRTAP5-9P26371 169 aa4.09□□□□□ -1.75
LRP8-203ENST00000354412 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
LRP8-203ENST00000354412 KRTAP9-6A0A140TA67 174 aa4.08□□□□□ -1.76
LRP8-203ENST00000354412 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.07□□□□□ -1.76
LRP8-203ENST00000354412 SPRR2EP22531 72 aa4.07□□□□□ -1.76
LRP8-203ENST00000354412 SPRR2BP35325 72 aa4.07□□□□□ -1.76
LRP8-203ENST00000354412 SPRR2AP35326 72 aa4.07□□□□□ -1.76
LRP8-203ENST00000354412 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
LRP8-203ENST00000354412 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
LRP8-203ENST00000354412 KRTAP4-9Q9BYQ8 210 aa4.03□□□□□ -1.76
LRP8-203ENST00000354412 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
LRP8-203ENST00000354412 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.78
LRP8-203ENST00000354412 PRM1P04553 51 aa3.92□□□□□ -1.78
LRP8-203ENST00000354412 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
LRP8-203ENST00000354412 KRTAP6-3Q3LI67 103 aa3.9□□□□□ -1.78
LRP8-203ENST00000354412 SPRR2DP22532 72 aa3.89□□□□□ -1.79
LRP8-203ENST00000354412 KRTAP9-7A8MTY7 169 aa3.89□□□□□ -1.79
LRP8-203ENST00000354412 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
LRP8-203ENST00000354412 NEBP20929 6669 aa3.73□□□□□ -1.81
LRP8-203ENST00000354412 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.81
LRP8-203ENST00000354412 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
LRP8-203ENST00000354412 MT3P25713 68 aa3.57□□□□□ -1.84
LRP8-203ENST00000354412 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
LRP8-203ENST00000354412 MT4P47944 62 aa3.51□□□□□ -1.85
LRP8-203ENST00000354412 KRTAP5-4Q6L8H1 288 aa3.51□□□□□ -1.85
LRP8-203ENST00000354412 KRTAP4-6Q9BYQ5 205 aa3.49□□□□□ -1.85
LRP8-203ENST00000354412 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.87
LRP8-203ENST00000354412 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
LRP8-203ENST00000354412 LCE1DQ5T752 114 aa3.32□□□□□ -1.88
LRP8-203ENST00000354412 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
LRP8-203ENST00000354412 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
LRP8-203ENST00000354412 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
LRP8-203ENST00000354412 KRTAP5-3Q6L8H2 238 aa3.13□□□□□ -1.91
LRP8-203ENST00000354412 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
LRP8-203ENST00000354412 MUC5ACP98088 5654 aa2.92□□□□□ -1.94
LRP8-203ENST00000354412 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.94
LRP8-203ENST00000354412 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
LRP8-203ENST00000354412 KRTAP5-10Q6L8G5 202 aa2.88□□□□□ -1.95
LRP8-203ENST00000354412 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
LRP8-203ENST00000354412 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
LRP8-203ENST00000354412 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
LRP8-203ENST00000354412 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
LRP8-203ENST00000354412 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
LRP8-203ENST00000354412 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
LRP8-203ENST00000354412 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
LRP8-203ENST00000354412 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
LRP8-203ENST00000354412 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
LRP8-203ENST00000354412 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
LRP8-203ENST00000354412 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
LRP8-203ENST00000354412 GPR98Q8WXG9 6306 aa2.51□□□□□ -2.01
LRP8-203ENST00000354412 KRTAP5-11Q6L8G4 156 aa2.41□□□□□ -2.02
LRP8-203ENST00000354412 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
LRP8-203ENST00000354412 MUC19Q7Z5P9 8384 aa2.4□□□□□ -2.02
LRP8-203ENST00000354412 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
LRP8-203ENST00000354412 KRTAP9-9Q9BYP9 154 aa2.36□□□□□ -2.03
LRP8-203ENST00000354412 PHGR1C9JFL3 82 aa2.05□□□□□ -2.08
LRP8-203ENST00000354412 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
LRP8-203ENST00000354412 MUC16Q8WXI7 14507 aa1.37□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 8.1 ms