RNA–Protein interactions for RNA: ENST00000352591.9

CEACAM1-203, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 3,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-203ENST00000352591 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
CEACAM1-203ENST00000352591 FCGBPQ9Y6R7 5405 aaPredicted RBP2.5□□□□□ -2.01
CEACAM1-203ENST00000352591 KRTAP4-7Q9BYR0 210 aa2.49□□□□□ -2.01
CEACAM1-203ENST00000352591 KRTAP9-9Q9BYP9 154 aa2.48□□□□□ -2.01
CEACAM1-203ENST00000352591 KRTAP9-4Q9BYQ2 154 aa2.48□□□□□ -2.01
CEACAM1-203ENST00000352591 CRCT1Q9UGL9 99 aa2.47□□□□□ -2.01
CEACAM1-203ENST00000352591 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
CEACAM1-203ENST00000352591 LCE1DQ5T752 114 aa2.43□□□□□ -2.02
CEACAM1-203ENST00000352591 KRTAP9-7A8MTY7 169 aa2.41□□□□□ -2.02
CEACAM1-203ENST00000352591 SYNE2Q8WXH0 6885 aaKnown RBP2.37□□□□□ -2.03
CEACAM1-203ENST00000352591 KRTAP4-9Q9BYQ8 210 aa2.37□□□□□ -2.03
CEACAM1-203ENST00000352591 KRTAP19-6Q3LI70 58 aa2.36□□□□□ -2.03
CEACAM1-203ENST00000352591 LCE3CQ5T5A8 94 aa2.35□□□□□ -2.03
CEACAM1-203ENST00000352591 KRTAP19-7Q3SYF9 63 aa2.35□□□□□ -2.03
CEACAM1-203ENST00000352591 KRTAP4-3Q9BYR4 195 aa2.35□□□□□ -2.03
CEACAM1-203ENST00000352591 KRTAP9-6A8MVA2 160 aa2.33□□□□□ -2.04
CEACAM1-203ENST00000352591 MACF1Q9UPN3 7388 aaKnown RBP2.31□□□□□ -2.04
CEACAM1-203ENST00000352591 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
CEACAM1-203ENST00000352591 KRTAP19-4Q3LI73 84 aa2.3□□□□□ -2.04
CEACAM1-203ENST00000352591 MT1EP04732 61 aa2.28□□□□□ -2.04
CEACAM1-203ENST00000352591 MT1GP13640 62 aa2.27□□□□□ -2.05
CEACAM1-203ENST00000352591 MT1LQ93083 61 aa2.26□□□□□ -2.05
CEACAM1-203ENST00000352591 KRTAP6-3Q3LI67 103 aa2.25□□□□□ -2.05
CEACAM1-203ENST00000352591 SPRR2FQ96RM1 72 aa2.25□□□□□ -2.05
CEACAM1-203ENST00000352591 KRTAP4-11Q9BYQ6 195 aa2.24□□□□□ -2.05
CEACAM1-203ENST00000352591 MDN1Q9NU22 5596 aa2.22□□□□□ -2.05
CEACAM1-203ENST00000352591 KRTAP19-3Q7Z4W3 81 aa2.15□□□□□ -2.07
CEACAM1-203ENST00000352591 LCE5AQ5TCM9 118 aa2.14□□□□□ -2.07
CEACAM1-203ENST00000352591 MT1MQ8N339 61 aa2.14□□□□□ -2.07
CEACAM1-203ENST00000352591 KRTAP20-1Q3LI63 56 aa2.13□□□□□ -2.07
CEACAM1-203ENST00000352591 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
CEACAM1-203ENST00000352591 KRTAP2-2Q9BYT5 123 aa2.11□□□□□ -2.07
CEACAM1-203ENST00000352591 KRTAP2-3P0C7H8 128 aa2.1□□□□□ -2.07
CEACAM1-203ENST00000352591 KRTAP2-4Q9BYR9 128 aa2.1□□□□□ -2.07
CEACAM1-203ENST00000352591 KRTAP2-1Q9BYU5 128 aa2.1□□□□□ -2.07
CEACAM1-203ENST00000352591 NEBP20929 6669 aa2.08□□□□□ -2.08
CEACAM1-203ENST00000352591 LCE4AQ5TA78 99 aa2.06□□□□□ -2.08
CEACAM1-203ENST00000352591 KRTAP5-9P26371 169 aa2.04□□□□□ -2.08
CEACAM1-203ENST00000352591 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
CEACAM1-203ENST00000352591 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
CEACAM1-203ENST00000352591 SPRR2EP22531 72 aa2.02□□□□□ -2.09
CEACAM1-203ENST00000352591 SPRR2BP35325 72 aa2.02□□□□□ -2.09
CEACAM1-203ENST00000352591 SPRR2AP35326 72 aa2.02□□□□□ -2.09
CEACAM1-203ENST00000352591 LCE1AQ5T7P2 110 aa2.01□□□□□ -2.09
CEACAM1-203ENST00000352591 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
CEACAM1-203ENST00000352591 KRTAP6-1Q3LI64 71 aa1.97□□□□□ -2.09
CEACAM1-203ENST00000352591 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
CEACAM1-203ENST00000352591 KRTAP5-5Q701N2 237 aaPredicted RBP1.92□□□□□ -2.1
CEACAM1-203ENST00000352591 SPRR2DP22532 72 aa1.91□□□□□ -2.1
CEACAM1-203ENST00000352591 MT3P25713 68 aa1.91□□□□□ -2.1
CEACAM1-203ENST00000352591 MT1AP04731 61 aa1.9□□□□□ -2.11
CEACAM1-203ENST00000352591 LCE1FQ5T754 118 aa1.89□□□□□ -2.11
CEACAM1-203ENST00000352591 KRTAP5-10Q6L8G5 202 aa1.87□□□□□ -2.11
CEACAM1-203ENST00000352591 LCE3DQ9BYE3 92 aa1.87□□□□□ -2.11
CEACAM1-203ENST00000352591 MT4P47944 62 aa1.84□□□□□ -2.12
CEACAM1-203ENST00000352591 LCE1EQ5T753 118 aa1.82□□□□□ -2.12
CEACAM1-203ENST00000352591 KRTAP6-2Q3LI66 62 aa1.81□□□□□ -2.12
CEACAM1-203ENST00000352591 PRM1P04553 51 aa1.81□□□□□ -2.12
CEACAM1-203ENST00000352591 LCE3EQ5T5B0 92 aa1.81□□□□□ -2.12
CEACAM1-203ENST00000352591 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
CEACAM1-203ENST00000352591 KRTAP5-4Q6L8H1 288 aa1.74□□□□□ -2.13
CEACAM1-203ENST00000352591 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.7□□□□□ -2.14
CEACAM1-203ENST00000352591 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
CEACAM1-203ENST00000352591 HMCN1Q96RW7 5635 aa1.65□□□□□ -2.15
CEACAM1-203ENST00000352591 KRTAP20-2Q3LI61 65 aa1.63□□□□□ -2.15
CEACAM1-203ENST00000352591 LCE1BQ5T7P3 118 aa1.62□□□□□ -2.15
CEACAM1-203ENST00000352591 KRTAP5-2Q701N4 177 aa1.61□□□□□ -2.15
CEACAM1-203ENST00000352591 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
CEACAM1-203ENST00000352591 KRTAP5-11Q6L8G4 156 aa1.47□□□□□ -2.17
CEACAM1-203ENST00000352591 KRTAP4-4Q9BYR3 166 aa1.45□□□□□ -2.18
CEACAM1-203ENST00000352591 KRTAP5-1Q6L8H4 278 aa1.43□□□□□ -2.18
CEACAM1-203ENST00000352591 KRTAP5-8O75690 187 aa1.35□□□□□ -2.19
CEACAM1-203ENST00000352591 LCE1CQ5T751 118 aa1.35□□□□□ -2.19
CEACAM1-203ENST00000352591 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
CEACAM1-203ENST00000352591 KRTAP21-1Q3LI58 79 aa1.07□□□□□ -2.24
CEACAM1-203ENST00000352591 PHGR1C9JFL3 82 aa1.02□□□□□ -2.25
CEACAM1-203ENST00000352591 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 13 ms