RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 LCE3AQ5TA76 89 aa8.06□□□□□ -1.12
SNX3-202ENST00000349379 MT1GP13640 62 aa7.94□□□□□ -1.14
SNX3-202ENST00000349379 RPS28P62857 69 aaKnown RBP7.94□□□□□ -1.14
SNX3-202ENST00000349379 MT1LQ93083 61 aa7.9□□□□□ -1.14
SNX3-202ENST00000349379 K7ERS5 55 aa7.89□□□□□ -1.15
SNX3-202ENST00000349379 PP632Q6XCG6 107 aa7.83□□□□□ -1.16
SNX3-202ENST00000349379 KRTAP25-1Q3LHN0 102 aa7.82□□□□□ -1.16
SNX3-202ENST00000349379 A6NED7 52 aa7.81□□□□□ -1.16
SNX3-202ENST00000349379 MT1MQ8N339 61 aa7.81□□□□□ -1.16
SNX3-202ENST00000349379 DSTQ03001 7570 aaKnown RBP7.79□□□□□ -1.16
SNX3-202ENST00000349379 KRTAP12-3P60328 96 aa7.75□□□□□ -1.17
SNX3-202ENST00000349379 KRTAP4-12Q9BQ66 201 aa7.6□□□□□ -1.19
SNX3-202ENST00000349379 KRTAP4-3Q9BYR4 195 aa7.6□□□□□ -1.19
SNX3-202ENST00000349379 KRTAP23-1A1A580 65 aa7.58□□□□□ -1.2
SNX3-202ENST00000349379 KRTAP4-9Q9BYQ8 210 aa7.58□□□□□ -1.2
SNX3-202ENST00000349379 CDC42SE1Q9NRR8 79 aa7.53□□□□□ -1.2
SNX3-202ENST00000349379 KRTAP4-7Q9BYR0 210 aa7.5□□□□□ -1.21
SNX3-202ENST00000349379 ROMO1P60602 79 aa7.44□□□□□ -1.22
SNX3-202ENST00000349379 AHNAK2Q8IVF2 5795 aa7.42□□□□□ -1.22
SNX3-202ENST00000349379 HMCN1Q96RW7 5635 aa7.42□□□□□ -1.22
SNX3-202ENST00000349379 LCE4AQ5TA78 99 aa7.41□□□□□ -1.22
SNX3-202ENST00000349379 KRTAP9-9Q9BYP9 154 aa7.39□□□□□ -1.23
SNX3-202ENST00000349379 KRTAP9-4Q9BYQ2 154 aa7.39□□□□□ -1.23
SNX3-202ENST00000349379 KRTAP19-4Q3LI73 84 aa7.37□□□□□ -1.23
SNX3-202ENST00000349379 KRTAP5-10Q6L8G5 202 aa7.35□□□□□ -1.23
SNX3-202ENST00000349379 KRTAP5-4Q6L8H1 288 aa7.35□□□□□ -1.23
SNX3-202ENST00000349379 LCE1DQ5T752 114 aa7.33□□□□□ -1.24
SNX3-202ENST00000349379 KRTAP15-1Q3LI76 137 aa7.32□□□□□ -1.24
SNX3-202ENST00000349379 MT4P47944 62 aa7.24□□□□□ -1.25
SNX3-202ENST00000349379 KRTAP5-7Q6L8G8 165 aa7.18□□□□□ -1.26
SNX3-202ENST00000349379 KRTAP5-5Q701N2 237 aaPredicted RBP7.18□□□□□ -1.26
SNX3-202ENST00000349379 LCE3CQ5T5A8 94 aa7.16□□□□□ -1.26
SNX3-202ENST00000349379 BRK1Q8WUW1 75 aa6.96□□□□□ -1.3
SNX3-202ENST00000349379 SPRR5A0A1B0GTR4 108 aa6.93□□□□□ -1.3
SNX3-202ENST00000349379 KRTAP20-2Q3LI61 65 aa6.89□□□□□ -1.31
SNX3-202ENST00000349379 KRTAP5-3Q6L8H2 238 aa6.89□□□□□ -1.31
SNX3-202ENST00000349379 KRTAP12-4P60329 112 aa6.86□□□□□ -1.31
SNX3-202ENST00000349379 SYNE1Q8NF91 8797 aaKnown RBP6.81□□□□□ -1.32
SNX3-202ENST00000349379 KRTAP9-6A8MVA2 160 aa6.79□□□□□ -1.32
SNX3-202ENST00000349379 KRTAP4-2Q9BYR5 136 aa6.77□□□□□ -1.33
SNX3-202ENST00000349379 MT1AP04731 61 aa6.72□□□□□ -1.33
SNX3-202ENST00000349379 KRTAP4-11Q9BYQ6 195 aa6.67□□□□□ -1.34
SNX3-202ENST00000349379 KRTAP6-1Q3LI64 71 aa6.66□□□□□ -1.34
SNX3-202ENST00000349379 PMAIP1Q13794 54 aa6.59□□□□□ -1.35
SNX3-202ENST00000349379 PRO0628Q9UI54 55 aa6.55□□□□□ -1.36
SNX3-202ENST00000349379 KRTAP5-2Q701N4 177 aa6.5□□□□□ -1.37
SNX3-202ENST00000349379 AHNAKQ09666 5890 aaKnown RBP6.48□□□□□ -1.37
SNX3-202ENST00000349379 MUC5ACP98088 5654 aa6.35□□□□□ -1.39
SNX3-202ENST00000349379 KRTAP6-2Q3LI66 62 aa6.3□□□□□ -1.4
SNX3-202ENST00000349379 H3BS24 57 aa6.29□□□□□ -1.4
SNX3-202ENST00000349379 MUC5BQ9HC84 5762 aaPredicted RBP6.27□□□□□ -1.41
SNX3-202ENST00000349379 PRAC1Q96KF2 57 aa6.25□□□□□ -1.41
SNX3-202ENST00000349379 KTN1-AS1Q86SY8 53 aa6.13□□□□□ -1.43
SNX3-202ENST00000349379 MT3P25713 68 aa6.11□□□□□ -1.43
SNX3-202ENST00000349379 KRTAP5-8O75690 187 aa6.04□□□□□ -1.44
SNX3-202ENST00000349379 OBSCNQ5VST9 7968 aa5.9□□□□□ -1.47
SNX3-202ENST00000349379 KRTAP5-1Q6L8H4 278 aa5.77□□□□□ -1.49
SNX3-202ENST00000349379 SVIPQ8NHG7 77 aa5.74□□□□□ -1.49
SNX3-202ENST00000349379 LCE1EQ5T753 118 aa5.6□□□□□ -1.51
SNX3-202ENST00000349379 LUZP6Q538Z0 58 aa5.2□□□□□ -1.58
SNX3-202ENST00000349379 LCE1CQ5T751 118 aa5.19□□□□□ -1.58
SNX3-202ENST00000349379 LCE1BQ5T7P3 118 aa5.19□□□□□ -1.58
SNX3-202ENST00000349379 LCE3DQ9BYE3 92 aa5.19□□□□□ -1.58
SNX3-202ENST00000349379 LCE3EQ5T5B0 92 aa4.93□□□□□ -1.62
SNX3-202ENST00000349379 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.79□□□□□ -1.64
SNX3-202ENST00000349379 KRTAP5-11Q6L8G4 156 aa4.7□□□□□ -1.66
SNX3-202ENST00000349379 NDUFAF8A1L188 74 aa4.61□□□□□ -1.67
SNX3-202ENST00000349379 LCE1FQ5T754 118 aa4.51□□□□□ -1.69
SNX3-202ENST00000349379 KRTAP21-2Q3LI59 83 aa4.41□□□□□ -1.7
SNX3-202ENST00000349379 PHGR1C9JFL3 82 aa4.28□□□□□ -1.72
SNX3-202ENST00000349379 A0A0A0MQY5 61 aa4.05□□□□□ -1.76
SNX3-202ENST00000349379 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
SNX3-202ENST00000349379 INE1O15225 51 aa3.85□□□□□ -1.79
SNX3-202ENST00000349379 PRM1P04553 51 aa3.81□□□□□ -1.8
SNX3-202ENST00000349379 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
SNX3-202ENST00000349379 KRTAP21-1Q3LI58 79 aa3.25□□□□□ -1.89
SNX3-202ENST00000349379 MUC16Q8WXI7 14507 aa2.64□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms