RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 KRTAP2-4Q9BYR9 128 aa5.28□□□□□ -1.56
TNFSF13-202ENST00000349228 KRTAP2-1Q9BYU5 128 aa5.28□□□□□ -1.56
TNFSF13-202ENST00000349228 FSIP2Q5CZC0 6907 aa5.27□□□□□ -1.57
TNFSF13-202ENST00000349228 SSPOA2VEC9 5147 aa5.26□□□□□ -1.57
TNFSF13-202ENST00000349228 LCE5AQ5TCM9 118 aa5.25□□□□□ -1.57
TNFSF13-202ENST00000349228 MT1GP13640 62 aa5.11□□□□□ -1.59
TNFSF13-202ENST00000349228 KRTAP19-3Q7Z4W3 81 aa5.08□□□□□ -1.6
TNFSF13-202ENST00000349228 CRCT1Q9UGL9 99 aa5.07□□□□□ -1.6
TNFSF13-202ENST00000349228 FCGBPQ9Y6R7 5405 aaPredicted RBP5.04□□□□□ -1.6
TNFSF13-202ENST00000349228 MT1MQ8N339 61 aa5.04□□□□□ -1.6
TNFSF13-202ENST00000349228 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
TNFSF13-202ENST00000349228 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
TNFSF13-202ENST00000349228 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
TNFSF13-202ENST00000349228 SPRR2FQ96RM1 72 aa4.86□□□□□ -1.63
TNFSF13-202ENST00000349228 LCE1FQ5T754 118 aa4.82□□□□□ -1.64
TNFSF13-202ENST00000349228 KRTAP9-7A8MTY7 169 aa4.82□□□□□ -1.64
TNFSF13-202ENST00000349228 MACF1Q9UPN3 7388 aaKnown RBP4.81□□□□□ -1.64
TNFSF13-202ENST00000349228 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
TNFSF13-202ENST00000349228 KRTAP4-6Q9BYQ5 205 aa4.8□□□□□ -1.64
TNFSF13-202ENST00000349228 KRTAP6-3Q3LI67 103 aa4.77□□□□□ -1.65
TNFSF13-202ENST00000349228 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.71□□□□□ -1.66
TNFSF13-202ENST00000349228 MUC12Q9UKN1 5478 aa4.7□□□□□ -1.66
TNFSF13-202ENST00000349228 KRTAP9-9Q9BYP9 154 aa4.7□□□□□ -1.66
TNFSF13-202ENST00000349228 SYNE2Q8WXH0 6885 aaKnown RBP4.66□□□□□ -1.66
TNFSF13-202ENST00000349228 KRTAP5-9P26371 169 aa4.63□□□□□ -1.67
TNFSF13-202ENST00000349228 LCE1EQ5T753 118 aa4.62□□□□□ -1.67
TNFSF13-202ENST00000349228 KRTAP12-4P60329 112 aa4.6□□□□□ -1.67
TNFSF13-202ENST00000349228 MT1AP04731 61 aa4.59□□□□□ -1.67
TNFSF13-202ENST00000349228 LCE3BQ5TA77 95 aa4.54□□□□□ -1.68
TNFSF13-202ENST00000349228 KRTAP6-1Q3LI64 71 aa4.52□□□□□ -1.69
TNFSF13-202ENST00000349228 KRTAP5-5Q701N2 237 aaPredicted RBP4.48□□□□□ -1.69
TNFSF13-202ENST00000349228 SPRR2EP22531 72 aa4.46□□□□□ -1.7
TNFSF13-202ENST00000349228 SPRR2BP35325 72 aa4.46□□□□□ -1.7
TNFSF13-202ENST00000349228 SPRR2AP35326 72 aa4.46□□□□□ -1.7
TNFSF13-202ENST00000349228 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
TNFSF13-202ENST00000349228 MDN1Q9NU22 5596 aa4.44□□□□□ -1.7
TNFSF13-202ENST00000349228 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
TNFSF13-202ENST00000349228 MT3P25713 68 aa4.39□□□□□ -1.71
TNFSF13-202ENST00000349228 DSTQ03001 7570 aaKnown RBP4.38□□□□□ -1.71
TNFSF13-202ENST00000349228 LCE3DQ9BYE3 92 aa4.38□□□□□ -1.71
TNFSF13-202ENST00000349228 KRTAP4-9Q9BYQ8 210 aa4.36□□□□□ -1.71
TNFSF13-202ENST00000349228 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
TNFSF13-202ENST00000349228 NEBP20929 6669 aa4.28□□□□□ -1.72
TNFSF13-202ENST00000349228 SPRR2DP22532 72 aa4.28□□□□□ -1.72
TNFSF13-202ENST00000349228 KRTAP4-12Q9BQ66 201 aa4.23□□□□□ -1.73
TNFSF13-202ENST00000349228 KRTAP20-1Q3LI63 56 aa4.21□□□□□ -1.74
TNFSF13-202ENST00000349228 SYNE1Q8NF91 8797 aaKnown RBP4.2□□□□□ -1.74
TNFSF13-202ENST00000349228 KRTAP6-2Q3LI66 62 aa4.07□□□□□ -1.76
TNFSF13-202ENST00000349228 PRM1P04553 51 aa4.02□□□□□ -1.77
TNFSF13-202ENST00000349228 KRTAP5-4Q6L8H1 288 aa4.01□□□□□ -1.77
TNFSF13-202ENST00000349228 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
TNFSF13-202ENST00000349228 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
TNFSF13-202ENST00000349228 KRTAP4-2Q9BYR5 136 aa3.73□□□□□ -1.81
TNFSF13-202ENST00000349228 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
TNFSF13-202ENST00000349228 KRTAP5-3Q6L8H2 238 aa3.71□□□□□ -1.81
TNFSF13-202ENST00000349228 MT4P47944 62 aa3.69□□□□□ -1.82
TNFSF13-202ENST00000349228 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
TNFSF13-202ENST00000349228 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
TNFSF13-202ENST00000349228 HMCN1Q96RW7 5635 aa3.59□□□□□ -1.84
TNFSF13-202ENST00000349228 AHNAK2Q8IVF2 5795 aa3.34□□□□□ -1.87
TNFSF13-202ENST00000349228 KRTAP5-10Q6L8G5 202 aa3.27□□□□□ -1.89
TNFSF13-202ENST00000349228 KRTAP5-7Q6L8G8 165 aa3.26□□□□□ -1.89
TNFSF13-202ENST00000349228 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
TNFSF13-202ENST00000349228 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
TNFSF13-202ENST00000349228 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
TNFSF13-202ENST00000349228 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
TNFSF13-202ENST00000349228 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
TNFSF13-202ENST00000349228 AHNAKQ09666 5890 aaKnown RBP3.02□□□□□ -1.93
TNFSF13-202ENST00000349228 KRTAP5-8O75690 187 aa3.01□□□□□ -1.93
TNFSF13-202ENST00000349228 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
TNFSF13-202ENST00000349228 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
TNFSF13-202ENST00000349228 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
TNFSF13-202ENST00000349228 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
TNFSF13-202ENST00000349228 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
TNFSF13-202ENST00000349228 KRTAP4-4Q9BYR3 166 aa2.56□□□□□ -2
TNFSF13-202ENST00000349228 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
TNFSF13-202ENST00000349228 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 742.9 ms