RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 FCGBPQ9Y6R7 5405 aaPredicted RBP4.85□□□□□ -1.63
ARHGEF1-202ENST00000347545 LCE2DQ5TA82 110 aaPredicted RBP4.83□□□□□ -1.64
ARHGEF1-202ENST00000347545 KRTAP4-3Q9BYR4 195 aa4.83□□□□□ -1.64
ARHGEF1-202ENST00000347545 LOC100996750A0A140TA64 210 aa4.79□□□□□ -1.64
ARHGEF1-202ENST00000347545 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
ARHGEF1-202ENST00000347545 MT1MQ8N339 61 aa4.72□□□□□ -1.65
ARHGEF1-202ENST00000347545 MT1GP13640 62 aa4.71□□□□□ -1.66
ARHGEF1-202ENST00000347545 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
ARHGEF1-202ENST00000347545 CRCT1Q9UGL9 99 aa4.57□□□□□ -1.68
ARHGEF1-202ENST00000347545 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
ARHGEF1-202ENST00000347545 DSTQ03001 7570 aaKnown RBP4.53□□□□□ -1.68
ARHGEF1-202ENST00000347545 SPRR2FQ96RM1 72 aa4.51□□□□□ -1.69
ARHGEF1-202ENST00000347545 MACF1Q9UPN3 7388 aaKnown RBP4.5□□□□□ -1.69
ARHGEF1-202ENST00000347545 KRTAP12-4P60329 112 aa4.47□□□□□ -1.69
ARHGEF1-202ENST00000347545 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
ARHGEF1-202ENST00000347545 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
ARHGEF1-202ENST00000347545 LCE3BQ5TA77 95 aa4.34□□□□□ -1.71
ARHGEF1-202ENST00000347545 SYNE2Q8WXH0 6885 aaKnown RBP4.33□□□□□ -1.72
ARHGEF1-202ENST00000347545 MDN1Q9NU22 5596 aa4.33□□□□□ -1.72
ARHGEF1-202ENST00000347545 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
ARHGEF1-202ENST00000347545 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
ARHGEF1-202ENST00000347545 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
ARHGEF1-202ENST00000347545 MT1AP04731 61 aa4.22□□□□□ -1.73
ARHGEF1-202ENST00000347545 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
ARHGEF1-202ENST00000347545 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
ARHGEF1-202ENST00000347545 KRTAP9-6A0A140TA67 174 aa4.18□□□□□ -1.74
ARHGEF1-202ENST00000347545 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
ARHGEF1-202ENST00000347545 SPRR2EP22531 72 aa4.1□□□□□ -1.75
ARHGEF1-202ENST00000347545 SPRR2BP35325 72 aa4.1□□□□□ -1.75
ARHGEF1-202ENST00000347545 SPRR2AP35326 72 aa4.1□□□□□ -1.75
ARHGEF1-202ENST00000347545 KRTAP9-7A8MTY7 169 aa4.08□□□□□ -1.76
ARHGEF1-202ENST00000347545 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
ARHGEF1-202ENST00000347545 PRM1P04553 51 aa4.02□□□□□ -1.77
ARHGEF1-202ENST00000347545 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
ARHGEF1-202ENST00000347545 KRTAP9-4Q9BYQ2 154 aa3.98□□□□□ -1.77
ARHGEF1-202ENST00000347545 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
ARHGEF1-202ENST00000347545 SPRR2DP22532 72 aa3.91□□□□□ -1.78
ARHGEF1-202ENST00000347545 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.89□□□□□ -1.79
ARHGEF1-202ENST00000347545 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
ARHGEF1-202ENST00000347545 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.8
ARHGEF1-202ENST00000347545 MT3P25713 68 aa3.75□□□□□ -1.81
ARHGEF1-202ENST00000347545 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
ARHGEF1-202ENST00000347545 NEBP20929 6669 aa3.59□□□□□ -1.83
ARHGEF1-202ENST00000347545 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
ARHGEF1-202ENST00000347545 KRTAP4-6Q9BYQ5 205 aa3.55□□□□□ -1.84
ARHGEF1-202ENST00000347545 MT4P47944 62 aa3.47□□□□□ -1.85
ARHGEF1-202ENST00000347545 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
ARHGEF1-202ENST00000347545 KRTAP20-2Q3LI61 65 aa3.44□□□□□ -1.86
ARHGEF1-202ENST00000347545 LCE1DQ5T752 114 aa3.44□□□□□ -1.86
ARHGEF1-202ENST00000347545 LCE4AQ5TA78 99 aa3.38□□□□□ -1.87
ARHGEF1-202ENST00000347545 HMCN1Q96RW7 5635 aa3.37□□□□□ -1.87
ARHGEF1-202ENST00000347545 KRTAP20-1Q3LI63 56 aa3.33□□□□□ -1.88
ARHGEF1-202ENST00000347545 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
ARHGEF1-202ENST00000347545 MUC5ACP98088 5654 aa3.26□□□□□ -1.89
ARHGEF1-202ENST00000347545 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
ARHGEF1-202ENST00000347545 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
ARHGEF1-202ENST00000347545 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
ARHGEF1-202ENST00000347545 KRTAP5-10Q6L8G5 202 aa3.02□□□□□ -1.93
ARHGEF1-202ENST00000347545 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
ARHGEF1-202ENST00000347545 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
ARHGEF1-202ENST00000347545 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
ARHGEF1-202ENST00000347545 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
ARHGEF1-202ENST00000347545 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
ARHGEF1-202ENST00000347545 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
ARHGEF1-202ENST00000347545 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
ARHGEF1-202ENST00000347545 AHNAK2Q8IVF2 5795 aa2.7□□□□□ -1.98
ARHGEF1-202ENST00000347545 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
ARHGEF1-202ENST00000347545 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.99
ARHGEF1-202ENST00000347545 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
ARHGEF1-202ENST00000347545 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
ARHGEF1-202ENST00000347545 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
ARHGEF1-202ENST00000347545 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
ARHGEF1-202ENST00000347545 KRTAP4-12Q9BQ66 201 aa2.39□□□□□ -2.03
ARHGEF1-202ENST00000347545 KRTAP9-9Q9BYP9 154 aa2.29□□□□□ -2.04
ARHGEF1-202ENST00000347545 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
ARHGEF1-202ENST00000347545 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
ARHGEF1-202ENST00000347545 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 54.8 ms