RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 SYNE2Q8WXH0 6885 aaKnown RBP6.01□□□□□ -1.45
SMARCC2-202ENST00000347471 CRCT1Q9UGL9 99 aa5.96□□□□□ -1.45
SMARCC2-202ENST00000347471 A0A0A0MQY5 61 aa5.95□□□□□ -1.46
SMARCC2-202ENST00000347471 KRTAP4-3Q9BYR4 195 aa5.93□□□□□ -1.46
SMARCC2-202ENST00000347471 KRTAP9-6A8MVA2 160 aa5.89□□□□□ -1.47
SMARCC2-202ENST00000347471 LOC100996750A0A140TA64 210 aa5.79□□□□□ -1.48
SMARCC2-202ENST00000347471 KRTAP19-3Q7Z4W3 81 aa5.79□□□□□ -1.48
SMARCC2-202ENST00000347471 MT1GP13640 62 aa5.78□□□□□ -1.48
SMARCC2-202ENST00000347471 MDN1Q9NU22 5596 aa5.75□□□□□ -1.49
SMARCC2-202ENST00000347471 MT1MQ8N339 61 aa5.73□□□□□ -1.49
SMARCC2-202ENST00000347471 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
SMARCC2-202ENST00000347471 SPRR2EP22531 72 aa5.57□□□□□ -1.52
SMARCC2-202ENST00000347471 SPRR2BP35325 72 aa5.57□□□□□ -1.52
SMARCC2-202ENST00000347471 SPRR2AP35326 72 aa5.57□□□□□ -1.52
SMARCC2-202ENST00000347471 LCE5AQ5TCM9 118 aa5.56□□□□□ -1.52
SMARCC2-202ENST00000347471 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
SMARCC2-202ENST00000347471 LCE1AQ5T7P2 110 aa5.47□□□□□ -1.53
SMARCC2-202ENST00000347471 KRTAP9-6A0A140TA67 174 aa5.46□□□□□ -1.54
SMARCC2-202ENST00000347471 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.43□□□□□ -1.54
SMARCC2-202ENST00000347471 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
SMARCC2-202ENST00000347471 KRTAP5-9P26371 169 aa5.37□□□□□ -1.55
SMARCC2-202ENST00000347471 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
SMARCC2-202ENST00000347471 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
SMARCC2-202ENST00000347471 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
SMARCC2-202ENST00000347471 SPRR2DP22532 72 aa5.33□□□□□ -1.56
SMARCC2-202ENST00000347471 LCE3BQ5TA77 95 aa5.31□□□□□ -1.56
SMARCC2-202ENST00000347471 KRTAP6-3Q3LI67 103 aa5.22□□□□□ -1.57
SMARCC2-202ENST00000347471 INE1O15225 51 aa5.2□□□□□ -1.58
SMARCC2-202ENST00000347471 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
SMARCC2-202ENST00000347471 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
SMARCC2-202ENST00000347471 KRTAP9-7A8MTY7 169 aa5.1□□□□□ -1.59
SMARCC2-202ENST00000347471 MT1AP04731 61 aa5.03□□□□□ -1.6
SMARCC2-202ENST00000347471 NEBP20929 6669 aa4.93□□□□□ -1.62
SMARCC2-202ENST00000347471 KRTAP12-4P60329 112 aa4.92□□□□□ -1.62
SMARCC2-202ENST00000347471 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.63
SMARCC2-202ENST00000347471 MT4P47944 62 aa4.84□□□□□ -1.64
SMARCC2-202ENST00000347471 KRTAP6-2Q3LI66 62 aa4.75□□□□□ -1.65
SMARCC2-202ENST00000347471 KRTAP9-4Q9BYQ2 154 aa4.75□□□□□ -1.65
SMARCC2-202ENST00000347471 LCE3DQ9BYE3 92 aa4.75□□□□□ -1.65
SMARCC2-202ENST00000347471 KRTAP4-6Q9BYQ5 205 aa4.67□□□□□ -1.66
SMARCC2-202ENST00000347471 MT3P25713 68 aa4.61□□□□□ -1.67
SMARCC2-202ENST00000347471 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
SMARCC2-202ENST00000347471 KRTAP2-2Q9BYT5 123 aa4.51□□□□□ -1.69
SMARCC2-202ENST00000347471 KRTAP20-1Q3LI63 56 aa4.5□□□□□ -1.69
SMARCC2-202ENST00000347471 KRTAP5-4Q6L8H1 288 aa4.49□□□□□ -1.69
SMARCC2-202ENST00000347471 HMCN1Q96RW7 5635 aa4.46□□□□□ -1.69
SMARCC2-202ENST00000347471 LCE1DQ5T752 114 aa4.46□□□□□ -1.69
SMARCC2-202ENST00000347471 LCE4AQ5TA78 99 aa4.43□□□□□ -1.7
SMARCC2-202ENST00000347471 KRTAP20-2Q3LI61 65 aa4.41□□□□□ -1.7
SMARCC2-202ENST00000347471 PRM1P04553 51 aa4.3□□□□□ -1.72
SMARCC2-202ENST00000347471 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
SMARCC2-202ENST00000347471 KRTAP5-3Q6L8H2 238 aa4.09□□□□□ -1.76
SMARCC2-202ENST00000347471 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
SMARCC2-202ENST00000347471 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
SMARCC2-202ENST00000347471 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
SMARCC2-202ENST00000347471 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
SMARCC2-202ENST00000347471 AHNAK2Q8IVF2 5795 aa3.66□□□□□ -1.82
SMARCC2-202ENST00000347471 KRTAP5-1Q6L8H4 278 aa3.63□□□□□ -1.83
SMARCC2-202ENST00000347471 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.84
SMARCC2-202ENST00000347471 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
SMARCC2-202ENST00000347471 LCE1CQ5T751 118 aa3.49□□□□□ -1.85
SMARCC2-202ENST00000347471 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
SMARCC2-202ENST00000347471 GPR98Q8WXG9 6306 aa3.45□□□□□ -1.86
SMARCC2-202ENST00000347471 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
SMARCC2-202ENST00000347471 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
SMARCC2-202ENST00000347471 KRTAP4-12Q9BQ66 201 aa3.32□□□□□ -1.88
SMARCC2-202ENST00000347471 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
SMARCC2-202ENST00000347471 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
SMARCC2-202ENST00000347471 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
SMARCC2-202ENST00000347471 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
SMARCC2-202ENST00000347471 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.14□□□□□ -1.91
SMARCC2-202ENST00000347471 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
SMARCC2-202ENST00000347471 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
SMARCC2-202ENST00000347471 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
SMARCC2-202ENST00000347471 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
SMARCC2-202ENST00000347471 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
SMARCC2-202ENST00000347471 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 89.5 ms