RNA–Protein interactions for RNA: ENST00000346085.9

ARID1B-202, Transcript of AT-rich interaction domain 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARID1B, Length 10,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-202ENST00000346085 KRTAP9-2Q9BYQ4 174 aa4.6□□□□□ -1.67
ARID1B-202ENST00000346085 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
ARID1B-202ENST00000346085 LRP2P98164 4655 aa4.57□□□□□ -1.68
ARID1B-202ENST00000346085 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
ARID1B-202ENST00000346085 KRTAP19-2Q3LHN2 52 aa4.51□□□□□ -1.69
ARID1B-202ENST00000346085 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
ARID1B-202ENST00000346085 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
ARID1B-202ENST00000346085 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
ARID1B-202ENST00000346085 LCE1AQ5T7P2 110 aa4.49□□□□□ -1.69
ARID1B-202ENST00000346085 KRTAP19-6Q3LI70 58 aa4.47□□□□□ -1.69
ARID1B-202ENST00000346085 HYDINQ4G0P3 5121 aa4.44□□□□□ -1.7
ARID1B-202ENST00000346085 MUC17Q685J3 4493 aa4.4□□□□□ -1.7
ARID1B-202ENST00000346085 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
ARID1B-202ENST00000346085 KRTAP20-1Q3LI63 56 aa4.36□□□□□ -1.71
ARID1B-202ENST00000346085 SYNE2Q8WXH0 6885 aaKnown RBP4.34□□□□□ -1.71
ARID1B-202ENST00000346085 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
ARID1B-202ENST00000346085 KRTAP6-1Q3LI64 71 aa4.31□□□□□ -1.72
ARID1B-202ENST00000346085 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
ARID1B-202ENST00000346085 RYR2Q92736 4967 aa4.28□□□□□ -1.72
ARID1B-202ENST00000346085 KMT2CQ8NEZ4 4911 aaKnown RBP4.27□□□□□ -1.73
ARID1B-202ENST00000346085 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
ARID1B-202ENST00000346085 PCLOQ9Y6V0 5065 aa4.17□□□□□ -1.74
ARID1B-202ENST00000346085 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
ARID1B-202ENST00000346085 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
ARID1B-202ENST00000346085 KIAA1109Q2LD37 5005 aa4.04□□□□□ -1.76
ARID1B-202ENST00000346085 HERC2O95714 4834 aa3.97□□□□□ -1.77
ARID1B-202ENST00000346085 LCE2AQ5TA79 106 aaPredicted RBP3.97□□□□□ -1.77
ARID1B-202ENST00000346085 BIRC6Q9NR09 4857 aa3.96□□□□□ -1.78
ARID1B-202ENST00000346085 KRTAP6-3Q3LI67 103 aa3.91□□□□□ -1.78
ARID1B-202ENST00000346085 HERC1Q15751 4861 aa3.86□□□□□ -1.79
ARID1B-202ENST00000346085 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.85□□□□□ -1.79
ARID1B-202ENST00000346085 FSIP2Q5CZC0 6907 aa3.83□□□□□ -1.8
ARID1B-202ENST00000346085 HMCN2Q8NDA2 5059 aa3.81□□□□□ -1.8
ARID1B-202ENST00000346085 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
ARID1B-202ENST00000346085 EPPK1P58107 5090 aaKnown RBP3.67□□□□□ -1.82
ARID1B-202ENST00000346085 MUC2Q02817 5179 aa3.67□□□□□ -1.82
ARID1B-202ENST00000346085 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
ARID1B-202ENST00000346085 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
ARID1B-202ENST00000346085 RNF213Q63HN8 5207 aa3.5□□□□□ -1.85
ARID1B-202ENST00000346085 ABCA13Q86UQ4 5058 aa3.47□□□□□ -1.85
ARID1B-202ENST00000346085 FAT4Q6V0I7 4981 aa3.44□□□□□ -1.86
ARID1B-202ENST00000346085 KRTAP4-6Q9BYQ5 205 aa3.44□□□□□ -1.86
ARID1B-202ENST00000346085 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
ARID1B-202ENST00000346085 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
ARID1B-202ENST00000346085 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
ARID1B-202ENST00000346085 UBR4Q5T4S7 5183 aa3.37□□□□□ -1.87
ARID1B-202ENST00000346085 KMT2DO14686 5537 aa3.28□□□□□ -1.88
ARID1B-202ENST00000346085 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.91
ARID1B-202ENST00000346085 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
ARID1B-202ENST00000346085 FCGBPQ9Y6R7 5405 aaPredicted RBP3.08□□□□□ -1.92
ARID1B-202ENST00000346085 MUC12Q9UKN1 5478 aa3.01□□□□□ -1.93
ARID1B-202ENST00000346085 DSTQ03001 7570 aaKnown RBP3□□□□□ -1.93
ARID1B-202ENST00000346085 USH2AO75445 5202 aa2.94□□□□□ -1.94
ARID1B-202ENST00000346085 NEBP20929 6669 aa2.87□□□□□ -1.95
ARID1B-202ENST00000346085 MACF1Q9UPN3 7388 aaKnown RBP2.87□□□□□ -1.95
ARID1B-202ENST00000346085 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
ARID1B-202ENST00000346085 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
ARID1B-202ENST00000346085 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
ARID1B-202ENST00000346085 SSPOA2VEC9 5147 aa2.77□□□□□ -1.97
ARID1B-202ENST00000346085 KRTAP5-10Q6L8G5 202 aa2.61□□□□□ -1.99
ARID1B-202ENST00000346085 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
ARID1B-202ENST00000346085 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
ARID1B-202ENST00000346085 PHGR1C9JFL3 82 aa2.53□□□□□ -2
ARID1B-202ENST00000346085 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
ARID1B-202ENST00000346085 KRTAP5-3Q6L8H2 238 aa2.47□□□□□ -2.01
ARID1B-202ENST00000346085 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
ARID1B-202ENST00000346085 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
ARID1B-202ENST00000346085 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
ARID1B-202ENST00000346085 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
ARID1B-202ENST00000346085 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
ARID1B-202ENST00000346085 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.06
ARID1B-202ENST00000346085 KRTAP5-11Q6L8G4 156 aa2.07□□□□□ -2.08
ARID1B-202ENST00000346085 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
ARID1B-202ENST00000346085 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
ARID1B-202ENST00000346085 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.81□□□□□ -2.12
ARID1B-202ENST00000346085 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
ARID1B-202ENST00000346085 KRTAP5-7Q6L8G8 165 aa1.54□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 36.7 ms