RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 FSIP2Q5CZC0 6907 aa7.78□□□□□ -1.16
NKX2-3-201ENST00000344586 KRTAP19-6Q3LI70 58 aa7.69□□□□□ -1.18
NKX2-3-201ENST00000344586 CRCT1Q9UGL9 99 aa7.66□□□□□ -1.18
NKX2-3-201ENST00000344586 KRTAP4-3Q9BYR4 195 aa7.54□□□□□ -1.2
NKX2-3-201ENST00000344586 LOC100996750A0A140TA64 210 aa7.53□□□□□ -1.2
NKX2-3-201ENST00000344586 KRTAP9-6A0A140TA67 174 aa7.48□□□□□ -1.21
NKX2-3-201ENST00000344586 FCGBPQ9Y6R7 5405 aaPredicted RBP7.45□□□□□ -1.22
NKX2-3-201ENST00000344586 MT1GP13640 62 aa7.45□□□□□ -1.22
NKX2-3-201ENST00000344586 MT1MQ8N339 61 aa7.42□□□□□ -1.22
NKX2-3-201ENST00000344586 KRTAP19-3Q7Z4W3 81 aa7.39□□□□□ -1.23
NKX2-3-201ENST00000344586 MUC12Q9UKN1 5478 aa7.31□□□□□ -1.24
NKX2-3-201ENST00000344586 LCE5AQ5TCM9 118 aa7.13□□□□□ -1.27
NKX2-3-201ENST00000344586 MACF1Q9UPN3 7388 aaKnown RBP7.11□□□□□ -1.27
NKX2-3-201ENST00000344586 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.1□□□□□ -1.27
NKX2-3-201ENST00000344586 KRTAP12-4P60329 112 aa7.05□□□□□ -1.28
NKX2-3-201ENST00000344586 SPRR2FQ96RM1 72 aa7.04□□□□□ -1.28
NKX2-3-201ENST00000344586 LCE3BQ5TA77 95 aa6.92□□□□□ -1.3
NKX2-3-201ENST00000344586 DSTQ03001 7570 aaKnown RBP6.91□□□□□ -1.3
NKX2-3-201ENST00000344586 SYNE2Q8WXH0 6885 aaKnown RBP6.9□□□□□ -1.31
NKX2-3-201ENST00000344586 KRTAP6-3Q3LI67 103 aa6.84□□□□□ -1.31
NKX2-3-201ENST00000344586 KRTAP5-9P26371 169 aa6.81□□□□□ -1.32
NKX2-3-201ENST00000344586 KRTAP9-7A8MTY7 169 aa6.81□□□□□ -1.32
NKX2-3-201ENST00000344586 KRTAP4-9Q9BYQ8 210 aa6.8□□□□□ -1.32
NKX2-3-201ENST00000344586 KRTAP6-1Q3LI64 71 aa6.77□□□□□ -1.33
NKX2-3-201ENST00000344586 MT1AP04731 61 aa6.75□□□□□ -1.33
NKX2-3-201ENST00000344586 KRTAP5-5Q701N2 237 aaPredicted RBP6.57□□□□□ -1.36
NKX2-3-201ENST00000344586 LCE1AQ5T7P2 110 aa6.56□□□□□ -1.36
NKX2-3-201ENST00000344586 SYNE1Q8NF91 8797 aaKnown RBP6.56□□□□□ -1.36
NKX2-3-201ENST00000344586 SPRR2EP22531 72 aa6.55□□□□□ -1.36
NKX2-3-201ENST00000344586 SPRR2BP35325 72 aa6.55□□□□□ -1.36
NKX2-3-201ENST00000344586 SPRR2AP35326 72 aa6.55□□□□□ -1.36
NKX2-3-201ENST00000344586 LCE3DQ9BYE3 92 aa6.55□□□□□ -1.36
NKX2-3-201ENST00000344586 MDN1Q9NU22 5596 aa6.54□□□□□ -1.36
NKX2-3-201ENST00000344586 LCE3EQ5T5B0 92 aa6.48□□□□□ -1.37
NKX2-3-201ENST00000344586 NEBP20929 6669 aa6.34□□□□□ -1.39
NKX2-3-201ENST00000344586 SPRR2DP22532 72 aa6.32□□□□□ -1.4
NKX2-3-201ENST00000344586 PRM1P04553 51 aa6.28□□□□□ -1.4
NKX2-3-201ENST00000344586 KRTAP9-4Q9BYQ2 154 aa6.28□□□□□ -1.4
NKX2-3-201ENST00000344586 KRTAP6-2Q3LI66 62 aa6.08□□□□□ -1.44
NKX2-3-201ENST00000344586 KRTAP20-1Q3LI63 56 aa6.03□□□□□ -1.44
NKX2-3-201ENST00000344586 MT3P25713 68 aa5.97□□□□□ -1.45
NKX2-3-201ENST00000344586 KRTAP2-2Q9BYT5 123 aa5.9□□□□□ -1.47
NKX2-3-201ENST00000344586 KRTAP5-4Q6L8H1 288 aa5.68□□□□□ -1.5
NKX2-3-201ENST00000344586 OBSCNQ5VST9 7968 aa5.67□□□□□ -1.5
NKX2-3-201ENST00000344586 LCE4AQ5TA78 99 aa5.6□□□□□ -1.51
NKX2-3-201ENST00000344586 MT4P47944 62 aa5.5□□□□□ -1.53
NKX2-3-201ENST00000344586 KRTAP4-6Q9BYQ5 205 aa5.46□□□□□ -1.54
NKX2-3-201ENST00000344586 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
NKX2-3-201ENST00000344586 KRTAP5-2Q701N4 177 aa5.36□□□□□ -1.55
NKX2-3-201ENST00000344586 KRTAP20-2Q3LI61 65 aa5.33□□□□□ -1.56
NKX2-3-201ENST00000344586 HMCN1Q96RW7 5635 aa5.32□□□□□ -1.56
NKX2-3-201ENST00000344586 KRTAP5-3Q6L8H2 238 aa5.09□□□□□ -1.59
NKX2-3-201ENST00000344586 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
NKX2-3-201ENST00000344586 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
NKX2-3-201ENST00000344586 AHNAK2Q8IVF2 5795 aa4.82□□□□□ -1.64
NKX2-3-201ENST00000344586 KRTAP5-10Q6L8G5 202 aa4.81□□□□□ -1.64
NKX2-3-201ENST00000344586 LCE1BQ5T7P3 118 aa4.79□□□□□ -1.64
NKX2-3-201ENST00000344586 KRTAP5-1Q6L8H4 278 aa4.76□□□□□ -1.65
NKX2-3-201ENST00000344586 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
NKX2-3-201ENST00000344586 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
NKX2-3-201ENST00000344586 LCE1CQ5T751 118 aa4.6□□□□□ -1.67
NKX2-3-201ENST00000344586 GPR98Q8WXG9 6306 aa4.56□□□□□ -1.68
NKX2-3-201ENST00000344586 KRTAP5-8O75690 187 aa4.48□□□□□ -1.69
NKX2-3-201ENST00000344586 KRTAP5-7Q6L8G8 165 aa4.38□□□□□ -1.71
NKX2-3-201ENST00000344586 KRTAP21-2Q3LI59 83 aa4.37□□□□□ -1.71
NKX2-3-201ENST00000344586 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
NKX2-3-201ENST00000344586 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
NKX2-3-201ENST00000344586 KRTAP4-12Q9BQ66 201 aa4.28□□□□□ -1.72
NKX2-3-201ENST00000344586 KRTAP21-1Q3LI58 79 aa3.98□□□□□ -1.77
NKX2-3-201ENST00000344586 KRTAP4-4Q9BYR3 166 aa3.98□□□□□ -1.77
NKX2-3-201ENST00000344586 KRTAP5-11Q6L8G4 156 aa3.94□□□□□ -1.78
NKX2-3-201ENST00000344586 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
NKX2-3-201ENST00000344586 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
NKX2-3-201ENST00000344586 MUC19Q7Z5P9 8384 aa3.67□□□□□ -1.82
NKX2-3-201ENST00000344586 PHGR1C9JFL3 82 aa3.41□□□□□ -1.86
NKX2-3-201ENST00000344586 LCE1FQ5T754 118 aa3.4□□□□□ -1.86
NKX2-3-201ENST00000344586 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 74.8 ms