RNA–Protein interactions for RNA: ENST00000344229.7

RNF13-201, Transcript of ring finger protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF13, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-201ENST00000344229 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
RNF13-201ENST00000344229 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
RNF13-201ENST00000344229 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
RNF13-201ENST00000344229 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
RNF13-201ENST00000344229 KRTAP2-1Q9BYU5 128 aa4.23□□□□□ -1.73
RNF13-201ENST00000344229 KRTAP19-3Q7Z4W3 81 aa4.22□□□□□ -1.73
RNF13-201ENST00000344229 MT1MQ8N339 61 aa4.2□□□□□ -1.74
RNF13-201ENST00000344229 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
RNF13-201ENST00000344229 MT1GP13640 62 aa4.18□□□□□ -1.74
RNF13-201ENST00000344229 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
RNF13-201ENST00000344229 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
RNF13-201ENST00000344229 KRTAP9-2Q9BYQ4 174 aa4.13□□□□□ -1.75
RNF13-201ENST00000344229 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
RNF13-201ENST00000344229 DSTQ03001 7570 aaKnown RBP4.08□□□□□ -1.76
RNF13-201ENST00000344229 CRCT1Q9UGL9 99 aa4.03□□□□□ -1.76
RNF13-201ENST00000344229 MDN1Q9NU22 5596 aa3.97□□□□□ -1.77
RNF13-201ENST00000344229 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
RNF13-201ENST00000344229 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
RNF13-201ENST00000344229 KRTAP12-4P60329 112 aa3.88□□□□□ -1.79
RNF13-201ENST00000344229 SPRR2EP22531 72 aa3.83□□□□□ -1.8
RNF13-201ENST00000344229 SPRR2BP35325 72 aa3.83□□□□□ -1.8
RNF13-201ENST00000344229 SPRR2AP35326 72 aa3.83□□□□□ -1.8
RNF13-201ENST00000344229 KRTAP6-1Q3LI64 71 aa3.79□□□□□ -1.8
RNF13-201ENST00000344229 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
RNF13-201ENST00000344229 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
RNF13-201ENST00000344229 MT1AP04731 61 aa3.73□□□□□ -1.81
RNF13-201ENST00000344229 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
RNF13-201ENST00000344229 KRTAP4-9Q9BYQ8 210 aa3.69□□□□□ -1.82
RNF13-201ENST00000344229 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
RNF13-201ENST00000344229 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
RNF13-201ENST00000344229 SPRR2DP22532 72 aa3.67□□□□□ -1.82
RNF13-201ENST00000344229 KRTAP4-6Q9BYQ5 205 aa3.66□□□□□ -1.82
RNF13-201ENST00000344229 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
RNF13-201ENST00000344229 KRTAP9-7A8MTY7 169 aa3.56□□□□□ -1.84
RNF13-201ENST00000344229 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
RNF13-201ENST00000344229 PRM1P04553 51 aa3.54□□□□□ -1.84
RNF13-201ENST00000344229 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
RNF13-201ENST00000344229 NEBP20929 6669 aa3.48□□□□□ -1.85
RNF13-201ENST00000344229 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
RNF13-201ENST00000344229 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
RNF13-201ENST00000344229 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
RNF13-201ENST00000344229 KRTAP5-4Q6L8H1 288 aa3.39□□□□□ -1.87
RNF13-201ENST00000344229 MT3P25713 68 aa3.34□□□□□ -1.87
RNF13-201ENST00000344229 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
RNF13-201ENST00000344229 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
RNF13-201ENST00000344229 MT4P47944 62 aa3.25□□□□□ -1.89
RNF13-201ENST00000344229 LCE4AQ5TA78 99 aa3.18□□□□□ -1.9
RNF13-201ENST00000344229 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
RNF13-201ENST00000344229 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
RNF13-201ENST00000344229 KRTAP5-2Q701N4 177 aa3.14□□□□□ -1.91
RNF13-201ENST00000344229 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
RNF13-201ENST00000344229 KRTAP5-3Q6L8H2 238 aa3.08□□□□□ -1.92
RNF13-201ENST00000344229 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.92
RNF13-201ENST00000344229 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
RNF13-201ENST00000344229 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
RNF13-201ENST00000344229 KRTAP4-2Q9BYR5 136 aa2.74□□□□□ -1.97
RNF13-201ENST00000344229 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
RNF13-201ENST00000344229 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
RNF13-201ENST00000344229 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
RNF13-201ENST00000344229 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
RNF13-201ENST00000344229 KRTAP4-11Q9BYQ6 195 aa2.66□□□□□ -1.98
RNF13-201ENST00000344229 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
RNF13-201ENST00000344229 KRTAP5-8O75690 187 aa2.58□□□□□ -2
RNF13-201ENST00000344229 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
RNF13-201ENST00000344229 KRTAP4-12Q9BQ66 201 aa2.52□□□□□ -2.01
RNF13-201ENST00000344229 KRTAP5-7Q6L8G8 165 aa2.5□□□□□ -2.01
RNF13-201ENST00000344229 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
RNF13-201ENST00000344229 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
RNF13-201ENST00000344229 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
RNF13-201ENST00000344229 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
RNF13-201ENST00000344229 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
RNF13-201ENST00000344229 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
RNF13-201ENST00000344229 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
RNF13-201ENST00000344229 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
RNF13-201ENST00000344229 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
RNF13-201ENST00000344229 AHNAKQ09666 5890 aaKnown RBP1.77□□□□□ -2.13
RNF13-201ENST00000344229 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 106.1 ms